RNA–Protein interactions for RNA: ENST00000372417.1

YIPF3-201, Transcript of Yip1 domain family member 3, humanhuman

TSL 2

Gene YIPF3, Length 406 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YIPF3-201ENST00000372417 APLP1P51693 650 aa12.01□□□□□ -0.49
YIPF3-201ENST00000372417 DDB1Q16531 1140 aa12.01□□□□□ -0.49
YIPF3-201ENST00000372417 NGDNQ8NEJ9 315 aaKnown RBP12.01□□□□□ -0.49
YIPF3-201ENST00000372417 PRAM1Q96QH2 718 aa12.01□□□□□ -0.49
YIPF3-201ENST00000372417 BCL9O00512 1426 aa12.01□□□□□ -0.49
YIPF3-201ENST00000372417 POLD1P28340 1107 aa12□□□□□ -0.49
YIPF3-201ENST00000372417 ITGAEP38570 1179 aa12□□□□□ -0.49
YIPF3-201ENST00000372417 TNS4Q8IZW8 715 aa12□□□□□ -0.49
YIPF3-201ENST00000372417 ZNF526Q8TF50 670 aaPredicted RBP12□□□□□ -0.49
YIPF3-201ENST00000372417 ADCY9O60503 1353 aa12□□□□□ -0.49
YIPF3-201ENST00000372417 PCNTO95613 3336 aa12□□□□□ -0.49
YIPF3-201ENST00000372417 YBX3P16989 372 aaKnown RBP eCLIP11.99□□□□□ -0.493e-8■■■□□ 14.8
YIPF3-201ENST00000372417 NLGN2Q8NFZ4 835 aa11.99□□□□□ -0.49
YIPF3-201ENST00000372417 PRR36Q9H6K5 1346 aa11.99□□□□□ -0.49
YIPF3-201ENST00000372417 CPDO75976 1380 aa11.99□□□□□ -0.49
YIPF3-201ENST00000372417 POGKQ9P215 609 aa11.98□□□□□ -0.49
YIPF3-201ENST00000372417 NUTM2GQ5VZR2 741 aa11.97□□□□□ -0.49
YIPF3-201ENST00000372417 DNAJC5GQ8N7S2 189 aa11.97□□□□□ -0.49
YIPF3-201ENST00000372417 SPATA31E1Q6ZUB1 1445 aa11.96□□□□□ -0.49
YIPF3-201ENST00000372417 RGL3Q3MIN7 710 aa11.96□□□□□ -0.49
YIPF3-201ENST00000372417 MARCH10Q8NA82 808 aaPredicted RBP11.96□□□□□ -0.49
YIPF3-201ENST00000372417 COL18A1P39060 1754 aa11.95□□□□□ -0.5
YIPF3-201ENST00000372417 PIK3C2AO00443 1686 aa11.95□□□□□ -0.5
YIPF3-201ENST00000372417 SLC16A10Q8TF71 515 aa11.95□□□□□ -0.5
YIPF3-201ENST00000372417 HIRIP3Q9BW71 556 aaPredicted RBP11.95□□□□□ -0.5
YIPF3-201ENST00000372417 ZNF827Q17R98 1081 aa11.94□□□□□ -0.5
YIPF3-201ENST00000372417 C14orf93Q9H972 538 aaKnown RBP11.93□□□□□ -0.5
YIPF3-201ENST00000372417 USP19O94966 1318 aa11.92□□□□□ -0.5
YIPF3-201ENST00000372417 MINK1Q8N4C8 1332 aaPredicted RBP11.92□□□□□ -0.5
YIPF3-201ENST00000372417 LOC105371045A0A1W2PR82 267 aa11.92□□□□□ -0.5
YIPF3-201ENST00000372417 KIF3CO14782 793 aa11.92□□□□□ -0.5
YIPF3-201ENST00000372417 PCDH10Q9P2E7 1040 aa11.92□□□□□ -0.5
YIPF3-201ENST00000372417 TRPM1Q7Z4N2 1603 aa11.92□□□□□ -0.5
YIPF3-201ENST00000372417 WASLO00401 505 aaPredicted RBP11.91□□□□□ -0.5
YIPF3-201ENST00000372417 CFAP70Q5T0N1 1121 aa11.91□□□□□ -0.5
YIPF3-201ENST00000372417 CDCA7Q9BWT1 371 aaPredicted RBP11.91□□□□□ -0.5
YIPF3-201ENST00000372417 SLC4A1APQ9BWU0 796 aaKnown RBP11.91□□□□□ -0.5
YIPF3-201ENST00000372417 TOM1L2Q6ZVM7 507 aa11.9□□□□□ -0.5
YIPF3-201ENST00000372417 LY75O60449 1722 aa11.89□□□□□ -0.51
YIPF3-201ENST00000372417 ADGRB1O14514 1584 aa11.89□□□□□ -0.51
YIPF3-201ENST00000372417 ZBTB7CA1YPR0 619 aa11.89□□□□□ -0.51
YIPF3-201ENST00000372417 ABTB2Q8N961 1025 aa11.89□□□□□ -0.51
YIPF3-201ENST00000372417 JMYQ8N9B5 988 aa11.89□□□□□ -0.51
YIPF3-201ENST00000372417 KLRG1Q96E93 195 aa11.89□□□□□ -0.51
YIPF3-201ENST00000372417 BRD4O60885 1362 aaPredicted RBP11.89□□□□□ -0.51
YIPF3-201ENST00000372417 TNS2Q63HR2 1409 aa11.88□□□□□ -0.51
YIPF3-201ENST00000372417 ABCC6O95255 1503 aa11.88□□□□□ -0.51
YIPF3-201ENST00000372417 GCP02774 474 aa11.88□□□□□ -0.51
YIPF3-201ENST00000372417 POLR3AO14802 1390 aaPredicted RBP11.88□□□□□ -0.51
YIPF3-201ENST00000372417 PNPLA7Q6ZV29 1317 aa11.87□□□□□ -0.51
YIPF3-201ENST00000372417 AKT1S1Q96B36 256 aa11.87□□□□□ -0.51
YIPF3-201ENST00000372417 WWC3Q9ULE0 1092 aa11.87□□□□□ -0.51
YIPF3-201ENST00000372417 WDR17Q8IZU2 1322 aa11.86□□□□□ -0.51
YIPF3-201ENST00000372417 EXOC5O00471 708 aa11.86□□□□□ -0.51
YIPF3-201ENST00000372417 TOMM70O94826 608 aa11.86□□□□□ -0.51
YIPF3-201ENST00000372417 NUDT16Q96DE0 195 aaKnown RBP11.86□□□□□ -0.51
YIPF3-201ENST00000372417 ACSBG1Q96GR2 724 aa11.86□□□□□ -0.51
YIPF3-201ENST00000372417 LRRC4BQ9NT99 713 aa11.86□□□□□ -0.51
YIPF3-201ENST00000372417 TRAK1Q9UPV9 953 aa11.86□□□□□ -0.51
YIPF3-201ENST00000372417 SLIT3O75094 1523 aa11.86□□□□□ -0.51
YIPF3-201ENST00000372417 USP6P35125 1406 aa11.86□□□□□ -0.51
YIPF3-201ENST00000372417 NLRP13Q86W25 1043 aa11.85□□□□□ -0.51
YIPF3-201ENST00000372417 CICQ96RK0 1608 aaPredicted RBP11.85□□□□□ -0.51
YIPF3-201ENST00000372417 ACEP12821 1306 aa11.85□□□□□ -0.51
YIPF3-201ENST00000372417 QRICH2Q9H0J4 1663 aa11.84□□□□□ -0.51
YIPF3-201ENST00000372417 HTRA3P83110 453 aa11.83□□□□□ -0.52
YIPF3-201ENST00000372417 TFCP2L1Q9NZI6 479 aa11.83□□□□□ -0.52
YIPF3-201ENST00000372417 SLC27A3Q5K4L6 730 aa11.82□□□□□ -0.52
YIPF3-201ENST00000372417 DOT1LQ8TEK3 1739 aa11.82□□□□□ -0.52
YIPF3-201ENST00000372417 TAF1LQ8IZX4 1826 aa11.81□□□□□ -0.52
YIPF3-201ENST00000372417 PKD1L3Q7Z443 1732 aa11.81□□□□□ -0.52
YIPF3-201ENST00000372417 CARD10Q9BWT7 1032 aa11.81□□□□□ -0.52
YIPF3-201ENST00000372417 CD2APQ9Y5K6 639 aa11.81□□□□□ -0.52
YIPF3-201ENST00000372417 C5P01031 1676 aa11.81□□□□□ -0.52
YIPF3-201ENST00000372417 CCDC7Q96M83 1385 aa11.8□□□□□ -0.52
YIPF3-201ENST00000372417 CPSF1Q10570 1443 aaKnown RBP11.8□□□□□ -0.52
YIPF3-201ENST00000372417 PPIP5K1Q6PFW1 1433 aa11.8□□□□□ -0.52
YIPF3-201ENST00000372417 USP54Q70EL1 1684 aa11.8□□□□□ -0.52
YIPF3-201ENST00000372417 TNRC6CQ9HCJ0 1690 aaKnown RBP11.79□□□□□ -0.52
YIPF3-201ENST00000372417 MSH5O43196 834 aa11.79□□□□□ -0.52
YIPF3-201ENST00000372417 CSB-PGBD3P0DP91 1061 aa11.79□□□□□ -0.52
YIPF3-201ENST00000372417 RBM46Q8TBY0 533 aaKnown RBP11.79□□□□□ -0.52
YIPF3-201ENST00000372417 PLEKHG3A1L390 1219 aa11.78□□□□□ -0.52
YIPF3-201ENST00000372417 MSL1Q68DK7 614 aa11.78□□□□□ -0.52
YIPF3-201ENST00000372417 AXIN2Q9Y2T1 843 aa11.78□□□□□ -0.52
YIPF3-201ENST00000372417 LTN1O94822 1766 aa11.77□□□□□ -0.52
YIPF3-201ENST00000372417 N4BP2Q86UW6 1770 aaPredicted RBP11.77□□□□□ -0.52
YIPF3-201ENST00000372417 HSPA1AP0DMV8 641 aaKnown RBP11.77□□□□□ -0.53
YIPF3-201ENST00000372417 HSPA1BP0DMV9 641 aaKnown RBP11.77□□□□□ -0.53
YIPF3-201ENST00000372417 C16orf71Q8IYS4 520 aaPredicted RBP11.77□□□□□ -0.53
YIPF3-201ENST00000372417 CDK19Q9BWU1 502 aa11.77□□□□□ -0.53
YIPF3-201ENST00000372417 CCDC61Q9Y6R9 512 aa11.77□□□□□ -0.53
YIPF3-201ENST00000372417 IGSF1Q8N6C5 1336 aa11.77□□□□□ -0.53
YIPF3-201ENST00000372417 KIF13BQ9NQT8 1826 aa11.76□□□□□ -0.53
YIPF3-201ENST00000372417 NMRK2Q9NPI5 230 aa11.76□□□□□ -0.53
YIPF3-201ENST00000372417 KIAA1210Q9ULL0 1709 aa11.75□□□□□ -0.53
YIPF3-201ENST00000372417 BRCA1P38398 1863 aaKnown RBP11.75□□□□□ -0.53
YIPF3-201ENST00000372417 NLRP6P59044 892 aa11.75□□□□□ -0.53
YIPF3-201ENST00000372417 FSTL1Q12841 308 aa11.75□□□□□ -0.53
YIPF3-201ENST00000372417 KIAA1551Q9HCM1 1747 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms