RNA–Protein interactions for RNA: ENST00000371842.2

BRD3-203, Transcript of bromodomain containing 3, humanhuman

TSL 5

Gene BRD3, Length 574 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRD3-203ENST00000371842 DDB1Q16531 1140 aa21.3■■□□□ 1
BRD3-203ENST00000371842 PROM2Q8N271 834 aa21.3■■□□□ 1
BRD3-203ENST00000371842 AATKQ6ZMQ8 1374 aa21.3■■□□□ 1
BRD3-203ENST00000371842 USP6P35125 1406 aa21.29■■□□□ 1
BRD3-203ENST00000371842 MYOM1P52179 1685 aa21.28■■□□□ 1
BRD3-203ENST00000371842 TOM1L2Q6ZVM7 507 aa21.28■■□□□ 1
BRD3-203ENST00000371842 BCL11BQ9C0K0 894 aaPredicted RBP21.28■■□□□ 1
BRD3-203ENST00000371842 CABP1Q9NZU7 370 aa21.28■■□□□ 1
BRD3-203ENST00000371842 AXIN2Q9Y2T1 843 aa21.28■■□□□ 1
BRD3-203ENST00000371842 CENPJQ9HC77 1338 aaPredicted RBP21.28■■□□□ 1
BRD3-203ENST00000371842 BRD4O60885 1362 aaPredicted RBP21.27■■□□□ 1
BRD3-203ENST00000371842 DCAF8L1A6NGE4 600 aa21.27■■□□□ 1
BRD3-203ENST00000371842 MARCH10Q8NA82 808 aaPredicted RBP21.27■■□□□ 1
BRD3-203ENST00000371842 ZBTB7AO95365 584 aa21.25■□□□□ 0.99
BRD3-203ENST00000371842 WDR17Q8IZU2 1322 aa21.24■□□□□ 0.99
BRD3-203ENST00000371842 PTGER2P43116 358 aa21.23■□□□□ 0.99
BRD3-203ENST00000371842 BCL9O00512 1426 aa21.22■□□□□ 0.99
BRD3-203ENST00000371842 ATF5Q9Y2D1 282 aaPredicted RBP21.22■□□□□ 0.99
BRD3-203ENST00000371842 CPSF1Q10570 1443 aaKnown RBP21.21■□□□□ 0.99
BRD3-203ENST00000371842 CHD4Q14839 1912 aa21.21■□□□□ 0.99
BRD3-203ENST00000371842 ARHGEF25Q86VW2 580 aa21.2■□□□□ 0.98
BRD3-203ENST00000371842 KAT6BQ8WYB5 2073 aa21.2■□□□□ 0.98
BRD3-203ENST00000371842 TXNRD1Q16881 649 aa21.19■□□□□ 0.98
BRD3-203ENST00000371842 CDCA7Q9BWT1 371 aaPredicted RBP21.18■□□□□ 0.98
BRD3-203ENST00000371842 SOX12O15370 315 aa21.17■□□□□ 0.98
BRD3-203ENST00000371842 CARD10Q9BWT7 1032 aa21.17■□□□□ 0.98
BRD3-203ENST00000371842 TTC21BQ7Z4L5 1316 aa21.16■□□□□ 0.98
BRD3-203ENST00000371842 SLC15A2Q16348 729 aa21.16■□□□□ 0.98
BRD3-203ENST00000371842 ZNF784Q8NCA9 323 aaPredicted RBP21.16■□□□□ 0.98
BRD3-203ENST00000371842 STK32BQ9NY57 414 aa21.16■□□□□ 0.98
BRD3-203ENST00000371842 TRPM1Q7Z4N2 1603 aa21.15■□□□□ 0.98
BRD3-203ENST00000371842 CSB-PGBD3P0DP91 1061 aa21.15■□□□□ 0.98
BRD3-203ENST00000371842 SYT17Q9BSW7 474 aa21.15■□□□□ 0.98
BRD3-203ENST00000371842 FHDC1Q9C0D6 1143 aaPredicted RBP21.15■□□□□ 0.98
BRD3-203ENST00000371842 NFAT5O94916 1531 aa21.14■□□□□ 0.98
BRD3-203ENST00000371842 NHSQ6T4R5 1651 aa21.14■□□□□ 0.97
BRD3-203ENST00000371842 EXOC5O00471 708 aa21.13■□□□□ 0.97
BRD3-203ENST00000371842 KCNH5Q8NCM2 988 aa21.13■□□□□ 0.97
BRD3-203ENST00000371842 SGIP1Q9BQI5 828 aa21.13■□□□□ 0.97
BRD3-203ENST00000371842 EVC2Q86UK5 1308 aa21.12■□□□□ 0.97
BRD3-203ENST00000371842 GOLGB1Q14789 3259 aaKnown RBP21.12■□□□□ 0.97
BRD3-203ENST00000371842 TNS2Q63HR2 1409 aa21.12■□□□□ 0.97
BRD3-203ENST00000371842 MTFR1LQ9H019 292 aa21.11■□□□□ 0.97
BRD3-203ENST00000371842 PAPPAQ13219 1627 aa21.11■□□□□ 0.97
BRD3-203ENST00000371842 BTAF1O14981 1849 aa21.11■□□□□ 0.97
BRD3-203ENST00000371842 ACSBG1Q96GR2 724 aa21.1■□□□□ 0.97
BRD3-203ENST00000371842 ZNF692Q9BU19 519 aaPredicted RBP21.1■□□□□ 0.97
BRD3-203ENST00000371842 CCDC7Q96M83 1385 aa21.1■□□□□ 0.97
BRD3-203ENST00000371842 TTC21AQ8NDW8 1320 aa21.08■□□□□ 0.97
BRD3-203ENST00000371842 LTN1O94822 1766 aa21.08■□□□□ 0.97
BRD3-203ENST00000371842 MON2Q7Z3U7 1717 aa21.08■□□□□ 0.97
BRD3-203ENST00000371842 L3MBTL2Q969R5 705 aa21.07■□□□□ 0.96
BRD3-203ENST00000371842 ABCC6O95255 1503 aa21.07■□□□□ 0.96
BRD3-203ENST00000371842 KTN1Q86UP2 1357 aaKnown RBP21.05■□□□□ 0.96
BRD3-203ENST00000371842 ARXQ96QS3 562 aa21.04■□□□□ 0.96
BRD3-203ENST00000371842 USP54Q70EL1 1684 aa21.04■□□□□ 0.96
BRD3-203ENST00000371842 ZNF827Q17R98 1081 aa21.03■□□□□ 0.96
BRD3-203ENST00000371842 ERBB3P21860 1342 aa21.03■□□□□ 0.96
BRD3-203ENST00000371842 LRRC4BQ9NT99 713 aa21.02■□□□□ 0.96
BRD3-203ENST00000371842 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.01■□□□□ 0.95
BRD3-203ENST00000371842 NLRP2Q9NX02 1062 aa21.01■□□□□ 0.95
BRD3-203ENST00000371842 MAP3K5Q99683 1374 aa21■□□□□ 0.95
BRD3-203ENST00000371842 TUBGCP6Q96RT7 1819 aa21■□□□□ 0.95
BRD3-203ENST00000371842 IL2RBP14784 551 aa21■□□□□ 0.95
BRD3-203ENST00000371842 QSER1Q2KHR3 1735 aa21■□□□□ 0.95
BRD3-203ENST00000371842 USP31Q70CQ4 1352 aa20.99■□□□□ 0.95
BRD3-203ENST00000371842 ROCK2O75116 1388 aaKnown RBP20.98■□□□□ 0.95
BRD3-203ENST00000371842 COL24A1Q17RW2 1714 aa20.98■□□□□ 0.95
BRD3-203ENST00000371842 SENP3-EIF4A1A0A087X0R7 540 aa20.98■□□□□ 0.95
BRD3-203ENST00000371842 C1QTNF8P60827 252 aa20.98■□□□□ 0.95
BRD3-203ENST00000371842 NME9Q86XW9 330 aa20.98■□□□□ 0.95
BRD3-203ENST00000371842 CD163L1Q9NR16 1453 aa20.98■□□□□ 0.95
BRD3-203ENST00000371842 SIN3AQ96ST3 1273 aa20.97■□□□□ 0.95
BRD3-203ENST00000371842 ANKRD24Q8TF21 1146 aa20.96■□□□□ 0.95
BRD3-203ENST00000371842 SBNO2Q9Y2G9 1366 aa20.96■□□□□ 0.95
BRD3-203ENST00000371842 AKT1S1Q96B36 256 aa20.95■□□□□ 0.94
BRD3-203ENST00000371842 GPR162Q16538 588 aa20.94■□□□□ 0.94
BRD3-203ENST00000371842 CEP350Q5VT06 3117 aa20.91■□□□□ 0.94
BRD3-203ENST00000371842 KCNQ4P56696 695 aa20.91■□□□□ 0.94
BRD3-203ENST00000371842 PNPLA7Q6ZV29 1317 aa20.91■□□□□ 0.94
BRD3-203ENST00000371842 KLHL34Q8N239 644 aa20.91■□□□□ 0.94
BRD3-203ENST00000371842 RGPD2P0DJD1 1756 aa20.9■□□□□ 0.94
BRD3-203ENST00000371842 LY75O60449 1722 aa20.9■□□□□ 0.94
BRD3-203ENST00000371842 DDX54Q8TDD1 881 aaKnown RBP20.9■□□□□ 0.94
BRD3-203ENST00000371842 SLC16A10Q8TF71 515 aa20.9■□□□□ 0.94
BRD3-203ENST00000371842 DOT1LQ8TEK3 1739 aa20.9■□□□□ 0.94
BRD3-203ENST00000371842 SHANK3Q9BYB0 1731 aa20.9■□□□□ 0.94
BRD3-203ENST00000371842 NEUROD1Q13562 356 aa20.89■□□□□ 0.93
BRD3-203ENST00000371842 TMC1Q8TDI8 760 aa20.89■□□□□ 0.93
BRD3-203ENST00000371842 SLC12A5Q9H2X9 1139 aa20.89■□□□□ 0.93
BRD3-203ENST00000371842 FAM208AQ9UK61 1670 aaKnown RBP20.89■□□□□ 0.93
BRD3-203ENST00000371842 SLC27A3Q5K4L6 730 aa20.88■□□□□ 0.93
BRD3-203ENST00000371842 NLGN2Q8NFZ4 835 aa20.88■□□□□ 0.93
BRD3-203ENST00000371842 POLD1P28340 1107 aa20.87■□□□□ 0.93
BRD3-203ENST00000371842 PELP1Q8IZL8 1130 aaKnown RBP20.87■□□□□ 0.93
BRD3-203ENST00000371842 EDC4Q6P2E9 1401 aaKnown RBP20.87■□□□□ 0.93
BRD3-203ENST00000371842 LTV1Q96GA3 475 aaPredicted RBP20.86■□□□□ 0.93
BRD3-203ENST00000371842 TFCP2L1Q9NZI6 479 aa20.86■□□□□ 0.93
BRD3-203ENST00000371842 PRIM1P49642 420 aaKnown RBP20.85■□□□□ 0.93
BRD3-203ENST00000371842 HDGFL2Q7Z4V5 671 aaPredicted RBP20.85■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 274 ms