RNA–Protein interactions for RNA: ENST00000371746.7

LHX3-201, Transcript of LIM homeobox 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LHX3, Length 2,403 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LHX3-201ENST00000371746 PEAK1Q9H792 1746 aa30.65■■■□□ 2.5
LHX3-201ENST00000371746 KDM2BQ8NHM5 1336 aa30.64■■■□□ 2.5
LHX3-201ENST00000371746 SULT6B1Q6IMI4 303 aa30.64■■■□□ 2.49
LHX3-201ENST00000371746 NLRP6P59044 892 aa30.63■■■□□ 2.49
LHX3-201ENST00000371746 LAS1LQ9Y4W2 734 aaKnown RBP30.63■■■□□ 2.49
LHX3-201ENST00000371746 RLBP1P12271 317 aa30.62■■■□□ 2.49
LHX3-201ENST00000371746 PIK3C2AO00443 1686 aa30.62■■■□□ 2.49
LHX3-201ENST00000371746 CT47B1P0C2W7 299 aaPredicted RBP30.62■■■□□ 2.49
LHX3-201ENST00000371746 PAK3O75914 559 aaPredicted RBP30.61■■■□□ 2.49
LHX3-201ENST00000371746 CLUAP1Q96AJ1 413 aa30.61■■■□□ 2.49
LHX3-201ENST00000371746 PHF8Q9UPP1 1060 aa30.6■■■□□ 2.49
LHX3-201ENST00000371746 ADGRL3Q9HAR2 1447 aa30.59■■■□□ 2.49
LHX3-201ENST00000371746 C14orf37Q86TY3 774 aa30.59■■■□□ 2.49
LHX3-201ENST00000371746 SMC4Q9NTJ3 1288 aa30.59■■■□□ 2.49
LHX3-201ENST00000371746 CENPQQ7L2Z9 268 aaPredicted RBP30.58■■■□□ 2.49
LHX3-201ENST00000371746 SSH1Q8WYL5 1049 aa30.58■■■□□ 2.49
LHX3-201ENST00000371746 ABTB2Q8N961 1025 aa30.57■■■□□ 2.48
LHX3-201ENST00000371746 FAM83GA6ND36 823 aa30.57■■■□□ 2.48
LHX3-201ENST00000371746 SBNO1A3KN83 1393 aa30.55■■■□□ 2.48
LHX3-201ENST00000371746 FLT4P35916 1363 aa30.55■■■□□ 2.48
LHX3-201ENST00000371746 TCERG1O14776 1098 aaKnown RBP30.55■■■□□ 2.48
LHX3-201ENST00000371746 AMPHP49418 695 aa30.55■■■□□ 2.48
LHX3-201ENST00000371746 ESCO1Q5FWF5 840 aa30.55■■■□□ 2.48
LHX3-201ENST00000371746 DCTN1Q14203 1278 aa30.54■■■□□ 2.48
LHX3-201ENST00000371746 CALD1Q05682 793 aaKnown RBP30.52■■■□□ 2.48
LHX3-201ENST00000371746 ZKSCAN2Q63HK3 967 aa30.52■■■□□ 2.48
LHX3-201ENST00000371746 LMOD3Q0VAK6 560 aa30.51■■■□□ 2.47
LHX3-201ENST00000371746 IFT57Q9NWB7 429 aa30.5■■■□□ 2.47
LHX3-201ENST00000371746 MBIPQ9NS73 344 aa30.49■■■□□ 2.47
LHX3-201ENST00000371746 GNAI1P63096 354 aa30.48■■■□□ 2.47
LHX3-201ENST00000371746 IGHDP01880 384 aa30.48■■■□□ 2.47
LHX3-201ENST00000371746 ZNF853P0CG23 659 aa30.48■■■□□ 2.47
LHX3-201ENST00000371746 RGPD1P0DJD0 1748 aa30.48■■■□□ 2.47
LHX3-201ENST00000371746 DLG5Q8TDM6 1919 aa30.47■■■□□ 2.47
LHX3-201ENST00000371746 FTSJ3Q8IY81 847 aaKnown RBP30.47■■■□□ 2.47
LHX3-201ENST00000371746 TRIM27P14373 513 aa30.47■■■□□ 2.47
LHX3-201ENST00000371746 PSME1Q06323 249 aa30.46■■■□□ 2.47
LHX3-201ENST00000371746 DZIP1LQ8IYY4 767 aaKnown RBP30.46■■■□□ 2.47
LHX3-201ENST00000371746 ORAI2Q96SN7 254 aa30.46■■■□□ 2.47
LHX3-201ENST00000371746 NOB1Q9ULX3 412 aaKnown RBP30.46■■■□□ 2.47
LHX3-201ENST00000371746 ARHGEF10O15013 1369 aa30.46■■■□□ 2.47
LHX3-201ENST00000371746 PROSER2Q86WR7 435 aaPredicted RBP30.45■■■□□ 2.47
LHX3-201ENST00000371746 TSPYL6Q8N831 410 aa30.45■■■□□ 2.47
LHX3-201ENST00000371746 MARF1Q9Y4F3 1742 aaKnown RBP30.45■■■□□ 2.47
LHX3-201ENST00000371746 EYA1Q99502 592 aa30.45■■■□□ 2.46
LHX3-201ENST00000371746 CFAP44Q96MT7 982 aa30.44■■■□□ 2.46
LHX3-201ENST00000371746 ELL2O00472 640 aaPredicted RBP30.44■■■□□ 2.46
LHX3-201ENST00000371746 HOXC9P31274 260 aa30.44■■■□□ 2.46
LHX3-201ENST00000371746 MVPQ14764 893 aaKnown RBP30.43■■■□□ 2.46
LHX3-201ENST00000371746 MS4A1P11836 297 aa30.43■■■□□ 2.46
LHX3-201ENST00000371746 ATF7IPQ6VMQ6 1270 aa30.43■■■□□ 2.46
LHX3-201ENST00000371746 XPCQ01831 940 aaPredicted RBP30.42■■■□□ 2.46
LHX3-201ENST00000371746 MCM10Q7L590 875 aa30.42■■■□□ 2.46
LHX3-201ENST00000371746 MYT1Q01538 1121 aa30.42■■■□□ 2.46
LHX3-201ENST00000371746 NWD1Q149M9 1564 aa30.42■■■□□ 2.46
LHX3-201ENST00000371746 FOXO3O43524 673 aa30.41■■■□□ 2.46
LHX3-201ENST00000371746 IGSF1Q8N6C5 1336 aa30.41■■■□□ 2.46
LHX3-201ENST00000371746 VAMP4O75379 141 aa30.41■■■□□ 2.46
LHX3-201ENST00000371746 PCDHB15Q9Y5E8 787 aa30.41■■■□□ 2.46
LHX3-201ENST00000371746 ALDH1L2Q3SY69 923 aa30.4■■■□□ 2.46
LHX3-201ENST00000371746 PDE4AP27815 886 aa30.39■■■□□ 2.46
LHX3-201ENST00000371746 KIF16BQ96L93 1317 aa30.39■■■□□ 2.46
LHX3-201ENST00000371746 KDRP35968 1356 aa30.39■■■□□ 2.46
LHX3-201ENST00000371746 LTV1Q96GA3 475 aaPredicted RBP30.38■■■□□ 2.45
LHX3-201ENST00000371746 C8orf58Q8NAV2 365 aa30.37■■■□□ 2.45
LHX3-201ENST00000371746 USP54Q70EL1 1684 aa30.37■■■□□ 2.45
LHX3-201ENST00000371746 MTHFSDQ2M296 383 aaKnown RBP30.36■■■□□ 2.45
LHX3-201ENST00000371746 KIF24Q5T7B8 1368 aa30.35■■■□□ 2.45
LHX3-201ENST00000371746 MSH5O43196 834 aa30.35■■■□□ 2.45
LHX3-201ENST00000371746 AAMPQ13685 434 aa30.35■■■□□ 2.45
LHX3-201ENST00000371746 TWISTNBQ3B726 338 aaPredicted RBP30.35■■■□□ 2.45
LHX3-201ENST00000371746 ITPRIPQ8IWB1 547 aa30.35■■■□□ 2.45
LHX3-201ENST00000371746 ZNF428Q96B54 188 aa30.35■■■□□ 2.45
LHX3-201ENST00000371746 PLEKHG5O94827 1062 aa30.35■■■□□ 2.45
LHX3-201ENST00000371746 RGS3P49796 1198 aa30.35■■■□□ 2.45
LHX3-201ENST00000371746 HSPA2P54652 639 aa30.34■■■□□ 2.45
LHX3-201ENST00000371746 BACH2Q9BYV9 841 aa30.34■■■□□ 2.45
LHX3-201ENST00000371746 IPO8O15397 1037 aaKnown RBP30.33■■■□□ 2.45
LHX3-201ENST00000371746 TMEM57Q8N5G2 664 aa30.33■■■□□ 2.45
LHX3-201ENST00000371746 C19orf44Q9H6X5 657 aa30.32■■■□□ 2.44
LHX3-201ENST00000371746 ZBTB7CA1YPR0 619 aa30.31■■■□□ 2.44
LHX3-201ENST00000371746 MRPL50Q8N5N7 158 aaKnown RBP30.3■■■□□ 2.44
LHX3-201ENST00000371746 KRT24Q2M2I5 525 aa30.3■■■□□ 2.44
LHX3-201ENST00000371746 CHL1O00533 1208 aa30.29■■■□□ 2.44
LHX3-201ENST00000371746 BRPF1P55201 1214 aaPredicted RBP30.29■■■□□ 2.44
LHX3-201ENST00000371746 LMOD2Q6P5Q4 547 aa30.29■■■□□ 2.44
LHX3-201ENST00000371746 NFAT5O94916 1531 aa30.29■■■□□ 2.44
LHX3-201ENST00000371746 DDX19BQ9UMR2 479 aa30.28■■■□□ 2.44
LHX3-201ENST00000371746 USHBP1Q8N6Y0 703 aa30.28■■■□□ 2.44
LHX3-201ENST00000371746 RTL1A6NKG5 1358 aa30.28■■■□□ 2.44
LHX3-201ENST00000371746 C1orf167Q5SNV9 1468 aa30.27■■■□□ 2.44
LHX3-201ENST00000371746 TMEM94Q12767 1356 aa30.27■■■□□ 2.44
LHX3-201ENST00000371746 RTF1Q92541 710 aaKnown RBP30.26■■■□□ 2.44
LHX3-201ENST00000371746 IP6K1Q92551 441 aa30.26■■■□□ 2.44
LHX3-201ENST00000371746 CRB1P82279 1406 aa30.26■■■□□ 2.43
LHX3-201ENST00000371746 MIS18AQ9NYP9 233 aa30.25■■■□□ 2.43
LHX3-201ENST00000371746 KCNH5Q8NCM2 988 aa30.25■■■□□ 2.43
LHX3-201ENST00000371746 GAS2L2Q8NHY3 880 aa30.25■■■□□ 2.43
LHX3-201ENST00000371746 LTN1O94822 1766 aa30.24■■■□□ 2.43
LHX3-201ENST00000371746 KRT28Q7Z3Y7 464 aa30.23■■■□□ 2.43
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms