RNA–Protein interactions for RNA: ENST00000371319.7

SSBP3-203, Transcript of single stranded DNA binding protein 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SSBP3, Length 1,578 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-203ENST00000371319 ATF3P18847 181 aa22.95■■□□□ 1.26
SSBP3-203ENST00000371319 NFAT5O94916 1531 aa22.94■■□□□ 1.26
SSBP3-203ENST00000371319 LTN1O94822 1766 aa22.93■■□□□ 1.26
SSBP3-203ENST00000371319 FOXO3O43524 673 aa22.93■■□□□ 1.26
SSBP3-203ENST00000371319 KIF24Q5T7B8 1368 aa22.93■■□□□ 1.26
SSBP3-203ENST00000371319 PHACTR3Q96KR7 559 aa22.93■■□□□ 1.26
SSBP3-203ENST00000371319 RIPK4P57078 832 aa22.92■■□□□ 1.26
SSBP3-203ENST00000371319 PPP4R2Q9NY27 417 aa22.92■■□□□ 1.26
SSBP3-203ENST00000371319 MSH6P52701 1360 aa22.91■■□□□ 1.26
SSBP3-203ENST00000371319 ALS2Q96Q42 1657 aa22.9■■□□□ 1.26
SSBP3-203ENST00000371319 SLIT3O75094 1523 aa22.9■■□□□ 1.26
SSBP3-203ENST00000371319 AMPHP49418 695 aa22.9■■□□□ 1.26
SSBP3-203ENST00000371319 NFE2L2Q16236 605 aa22.9■■□□□ 1.26
SSBP3-203ENST00000371319 CADPS2Q86UW7 1296 aa22.9■■□□□ 1.26
SSBP3-203ENST00000371319 DLG5Q8TDM6 1919 aa22.9■■□□□ 1.26
SSBP3-203ENST00000371319 ARHGEF10O15013 1369 aa22.89■■□□□ 1.26
SSBP3-203ENST00000371319 ZNF335Q9H4Z2 1342 aaPredicted RBP22.89■■□□□ 1.26
SSBP3-203ENST00000371319 XPCQ01831 940 aaPredicted RBP22.89■■□□□ 1.26
SSBP3-203ENST00000371319 KRT28Q7Z3Y7 464 aa22.89■■□□□ 1.26
SSBP3-203ENST00000371319 NEFMP07197 916 aa22.89■■□□□ 1.25
SSBP3-203ENST00000371319 PHRF1Q9P1Y6 1649 aaKnown RBP22.89■■□□□ 1.25
SSBP3-203ENST00000371319 RTL1A6NKG5 1358 aa22.88■■□□□ 1.25
SSBP3-203ENST00000371319 HOXC9P31274 260 aa22.88■■□□□ 1.25
SSBP3-203ENST00000371319 AEBP1Q8IUX7 1158 aa22.88■■□□□ 1.25
SSBP3-203ENST00000371319 IL16Q14005 1332 aa22.87■■□□□ 1.25
SSBP3-203ENST00000371319 SULT6B1Q6IMI4 303 aa22.86■■□□□ 1.25
SSBP3-203ENST00000371319 MYH16Q9H6N6 1097 aa22.85■■□□□ 1.25
SSBP3-203ENST00000371319 PLIN1O60240 522 aa22.84■■□□□ 1.25
SSBP3-203ENST00000371319 USP19O94966 1318 aa22.84■■□□□ 1.25
SSBP3-203ENST00000371319 KCNH5Q8NCM2 988 aa22.84■■□□□ 1.25
SSBP3-203ENST00000371319 IGSF1Q8N6C5 1336 aa22.83■■□□□ 1.25
SSBP3-203ENST00000371319 KDRP35968 1356 aa22.82■■□□□ 1.24
SSBP3-203ENST00000371319 FANCIQ9NVI1 1328 aa22.82■■□□□ 1.24
SSBP3-203ENST00000371319 EYA1Q99502 592 aa22.81■■□□□ 1.24
SSBP3-203ENST00000371319 PXDNQ92626 1479 aa22.81■■□□□ 1.24
SSBP3-203ENST00000371319 IP6K1Q92551 441 aa22.8■■□□□ 1.24
SSBP3-203ENST00000371319 MED1Q15648 1581 aaPredicted RBP22.8■■□□□ 1.24
SSBP3-203ENST00000371319 EXOC6Q8TAG9 804 aa22.79■■□□□ 1.24
SSBP3-203ENST00000371319 DDX17Q92841 729 aaKnown RBP22.79■■□□□ 1.24
SSBP3-203ENST00000371319 TSR2Q969E8 191 aaKnown RBP22.79■■□□□ 1.24
SSBP3-203ENST00000371319 BCAR3O75815 825 aa22.78■■□□□ 1.24
SSBP3-203ENST00000371319 GCP02774 474 aa22.78■■□□□ 1.24
SSBP3-203ENST00000371319 NPHP3Q7Z494 1330 aa22.78■■□□□ 1.24
SSBP3-203ENST00000371319 LMOD3Q0VAK6 560 aa22.76■■□□□ 1.23
SSBP3-203ENST00000371319 C20orf194Q5TEA3 1177 aa22.76■■□□□ 1.23
SSBP3-203ENST00000371319 B4GALNT3Q6L9W6 998 aa22.76■■□□□ 1.23
SSBP3-203ENST00000371319 LMOD2Q6P5Q4 547 aa22.76■■□□□ 1.23
SSBP3-203ENST00000371319 ARHGEF25Q86VW2 580 aa22.76■■□□□ 1.23
SSBP3-203ENST00000371319 GOLGA6L2Q8N9W4 650 aaPredicted RBP22.76■■□□□ 1.23
SSBP3-203ENST00000371319 CRYBG1Q9Y4K1 1723 aa22.76■■□□□ 1.23
SSBP3-203ENST00000371319 TNS3Q68CZ2 1445 aa22.75■■□□□ 1.23
SSBP3-203ENST00000371319 RARSP54136 660 aaKnown RBP22.75■■□□□ 1.23
SSBP3-203ENST00000371319 BRINP3Q76B58 766 aa22.75■■□□□ 1.23
SSBP3-203ENST00000371319 THUMPD2Q9BTF0 503 aaKnown RBP22.75■■□□□ 1.23
SSBP3-203ENST00000371319 CRBNQ96SW2 442 aa22.74■■□□□ 1.23
SSBP3-203ENST00000371319 RGPD2P0DJD1 1756 aa22.74■■□□□ 1.23
SSBP3-203ENST00000371319 CT47B1P0C2W7 299 aaPredicted RBP22.73■■□□□ 1.23
SSBP3-203ENST00000371319 CALD1Q05682 793 aaKnown RBP22.73■■□□□ 1.23
SSBP3-203ENST00000371319 EXOSC9Q06265 439 aaKnown RBP22.73■■□□□ 1.23
SSBP3-203ENST00000371319 LTV1Q96GA3 475 aaPredicted RBP22.73■■□□□ 1.23
SSBP3-203ENST00000371319 ZNF853P0CG23 659 aa22.72■■□□□ 1.23
SSBP3-203ENST00000371319 PELP1Q8IZL8 1130 aaKnown RBP22.72■■□□□ 1.23
SSBP3-203ENST00000371319 IFT57Q9NWB7 429 aa22.72■■□□□ 1.23
SSBP3-203ENST00000371319 FAM83GA6ND36 823 aa22.71■■□□□ 1.23
SSBP3-203ENST00000371319 SPATA31A3Q5VYP0 1347 aa22.71■■□□□ 1.23
SSBP3-203ENST00000371319 SLAIN2Q9P270 581 aa22.71■■□□□ 1.23
SSBP3-203ENST00000371319 ZBTB7CA1YPR0 619 aa22.7■■□□□ 1.22
SSBP3-203ENST00000371319 CAMTA1Q9Y6Y1 1673 aa22.69■■□□□ 1.22
SSBP3-203ENST00000371319 PLEKHG5O94827 1062 aa22.69■■□□□ 1.22
SSBP3-203ENST00000371319 GNAI1P63096 354 aa22.69■■□□□ 1.22
SSBP3-203ENST00000371319 MTHFSDQ2M296 383 aaKnown RBP22.69■■□□□ 1.22
SSBP3-203ENST00000371319 RGPD5Q99666 1765 aa22.69■■□□□ 1.22
SSBP3-203ENST00000371319 DCTN1Q14203 1278 aa22.68■■□□□ 1.22
SSBP3-203ENST00000371319 COL18A1P39060 1754 aa22.68■■□□□ 1.22
SSBP3-203ENST00000371319 LAS1LQ9Y4W2 734 aaKnown RBP22.67■■□□□ 1.22
SSBP3-203ENST00000371319 NCAPD2Q15021 1401 aa22.67■■□□□ 1.22
SSBP3-203ENST00000371319 CCDC136Q96JN2 1154 aa22.67■■□□□ 1.22
SSBP3-203ENST00000371319 NBPF6Q5VWK0 638 aa22.66■■□□□ 1.22
SSBP3-203ENST00000371319 USHBP1Q8N6Y0 703 aa22.66■■□□□ 1.22
SSBP3-203ENST00000371319 NBPF4Q96M43 638 aa22.66■■□□□ 1.22
SSBP3-203ENST00000371319 NHSL1Q5SYE7 1610 aa22.66■■□□□ 1.22
SSBP3-203ENST00000371319 GAS2L2Q8NHY3 880 aa22.65■■□□□ 1.22
SSBP3-203ENST00000371319 CFAP44Q96MT7 982 aa22.65■■□□□ 1.22
SSBP3-203ENST00000371319 MBIPQ9NS73 344 aa22.65■■□□□ 1.22
SSBP3-203ENST00000371319 SOS2Q07890 1332 aaPredicted RBP22.64■■□□□ 1.22
SSBP3-203ENST00000371319 LRRC37A3O60309 1634 aa22.64■■□□□ 1.22
SSBP3-203ENST00000371319 CRB1P82279 1406 aa22.64■■□□□ 1.22
SSBP3-203ENST00000371319 MCM10Q7L590 875 aa22.63■■□□□ 1.21
SSBP3-203ENST00000371319 AXIN2Q9Y2T1 843 aa22.63■■□□□ 1.21
SSBP3-203ENST00000371319 LMO7Q8WWI1 1683 aa22.63■■□□□ 1.21
SSBP3-203ENST00000371319 PDE3AQ14432 1141 aa22.63■■□□□ 1.21
SSBP3-203ENST00000371319 ANKRD24Q8TF21 1146 aa22.63■■□□□ 1.21
SSBP3-203ENST00000371319 BCL2L13Q9BXK5 485 aa22.63■■□□□ 1.21
SSBP3-203ENST00000371319 ABCC6O95255 1503 aa22.63■■□□□ 1.21
SSBP3-203ENST00000371319 ZC3H6P61129 1189 aaKnown RBP22.62■■□□□ 1.21
SSBP3-203ENST00000371319 LRRC59Q96AG4 307 aaKnown RBP22.62■■□□□ 1.21
SSBP3-203ENST00000371319 LTBP4Q8N2S1 1624 aa22.61■■□□□ 1.21
SSBP3-203ENST00000371319 CABLES1Q8TDN4 633 aa22.6■■□□□ 1.21
SSBP3-203ENST00000371319 SSH1Q8WYL5 1049 aa22.6■■□□□ 1.21
SSBP3-203ENST00000371319 HTATSF1O43719 755 aaKnown RBP22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms