RNA–Protein interactions for RNA: ENST00000370664.3

UBTD1-201, Transcript of ubiquitin domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBTD1, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBTD1-201ENST00000370664 RIPK4P57078 832 aa30.74■■■□□ 2.51
UBTD1-201ENST00000370664 CADPS2Q86UW7 1296 aa30.74■■■□□ 2.51
UBTD1-201ENST00000370664 PPP4R2Q9NY27 417 aa30.74■■■□□ 2.51
UBTD1-201ENST00000370664 KIF24Q5T7B8 1368 aa30.74■■■□□ 2.51
UBTD1-201ENST00000370664 TRIM35Q9UPQ4 493 aa30.73■■■□□ 2.51
UBTD1-201ENST00000370664 MSH6P52701 1360 aa30.73■■■□□ 2.51
UBTD1-201ENST00000370664 NFE2L2Q16236 605 aa30.7■■■□□ 2.5
UBTD1-201ENST00000370664 KRT28Q7Z3Y7 464 aa30.7■■■□□ 2.5
UBTD1-201ENST00000370664 PHACTR3Q96KR7 559 aa30.7■■■□□ 2.5
UBTD1-201ENST00000370664 MYH16Q9H6N6 1097 aa30.69■■■□□ 2.5
UBTD1-201ENST00000370664 XPCQ01831 940 aaPredicted RBP30.68■■■□□ 2.5
UBTD1-201ENST00000370664 RGPD1P0DJD0 1748 aa30.68■■■□□ 2.5
UBTD1-201ENST00000370664 TRPM3Q9HCF6 1732 aaPredicted RBP30.68■■■□□ 2.5
UBTD1-201ENST00000370664 XIRP1Q702N8 1843 aaKnown RBP30.67■■■□□ 2.5
UBTD1-201ENST00000370664 IL16Q14005 1332 aa30.67■■■□□ 2.5
UBTD1-201ENST00000370664 ZNF335Q9H4Z2 1342 aaPredicted RBP30.66■■■□□ 2.5
UBTD1-201ENST00000370664 SULT6B1Q6IMI4 303 aa30.66■■■□□ 2.5
UBTD1-201ENST00000370664 KCNH5Q8NCM2 988 aa30.66■■■□□ 2.5
UBTD1-201ENST00000370664 HOXC9P31274 260 aa30.65■■■□□ 2.5
UBTD1-201ENST00000370664 ARHGEF10O15013 1369 aa30.65■■■□□ 2.5
UBTD1-201ENST00000370664 NFAT5O94916 1531 aa30.64■■■□□ 2.5
UBTD1-201ENST00000370664 PELP1Q8IZL8 1130 aaKnown RBP30.64■■■□□ 2.5
UBTD1-201ENST00000370664 RTL1A6NKG5 1358 aa30.64■■■□□ 2.5
UBTD1-201ENST00000370664 AEBP1Q8IUX7 1158 aa30.63■■■□□ 2.49
UBTD1-201ENST00000370664 PLIN1O60240 522 aa30.6■■■□□ 2.49
UBTD1-201ENST00000370664 GOLGA6L2Q8N9W4 650 aaPredicted RBP30.6■■■□□ 2.49
UBTD1-201ENST00000370664 SLIT3O75094 1523 aa30.6■■■□□ 2.49
UBTD1-201ENST00000370664 LMOD2Q6P5Q4 547 aa30.59■■■□□ 2.49
UBTD1-201ENST00000370664 LTN1O94822 1766 aa30.59■■■□□ 2.49
UBTD1-201ENST00000370664 LMOD3Q0VAK6 560 aa30.58■■■□□ 2.49
UBTD1-201ENST00000370664 IGSF1Q8N6C5 1336 aa30.58■■■□□ 2.49
UBTD1-201ENST00000370664 IP6K1Q92551 441 aa30.57■■■□□ 2.48
UBTD1-201ENST00000370664 USP19O94966 1318 aa30.57■■■□□ 2.48
UBTD1-201ENST00000370664 NPHP3Q7Z494 1330 aa30.57■■■□□ 2.48
UBTD1-201ENST00000370664 EYA1Q99502 592 aa30.56■■■□□ 2.48
UBTD1-201ENST00000370664 FANCIQ9NVI1 1328 aa30.56■■■□□ 2.48
UBTD1-201ENST00000370664 ALS2Q96Q42 1657 aa30.56■■■□□ 2.48
UBTD1-201ENST00000370664 GCP02774 474 aa30.56■■■□□ 2.48
UBTD1-201ENST00000370664 CALD1Q05682 793 aaKnown RBP30.56■■■□□ 2.48
UBTD1-201ENST00000370664 KDRP35968 1356 aa30.55■■■□□ 2.48
UBTD1-201ENST00000370664 PHRF1Q9P1Y6 1649 aaKnown RBP30.54■■■□□ 2.48
UBTD1-201ENST00000370664 EXOC6Q8TAG9 804 aa30.53■■■□□ 2.48
UBTD1-201ENST00000370664 TSR2Q969E8 191 aaKnown RBP30.53■■■□□ 2.48
UBTD1-201ENST00000370664 DLG5Q8TDM6 1919 aa30.52■■■□□ 2.48
UBTD1-201ENST00000370664 BCAR3O75815 825 aa30.52■■■□□ 2.48
UBTD1-201ENST00000370664 DDX17Q92841 729 aaKnown RBP30.52■■■□□ 2.48
UBTD1-201ENST00000370664 CT47B1P0C2W7 299 aaPredicted RBP30.51■■■□□ 2.47
UBTD1-201ENST00000370664 B4GALNT3Q6L9W6 998 aa30.51■■■□□ 2.47
UBTD1-201ENST00000370664 ARHGEF25Q86VW2 580 aa30.5■■■□□ 2.47
UBTD1-201ENST00000370664 RARSP54136 660 aaKnown RBP30.49■■■□□ 2.47
UBTD1-201ENST00000370664 LTV1Q96GA3 475 aaPredicted RBP30.49■■■□□ 2.47
UBTD1-201ENST00000370664 PXDNQ92626 1479 aa30.48■■■□□ 2.47
UBTD1-201ENST00000370664 ZBTB7CA1YPR0 619 aa30.47■■■□□ 2.47
UBTD1-201ENST00000370664 BRINP3Q76B58 766 aa30.47■■■□□ 2.47
UBTD1-201ENST00000370664 EXOSC9Q06265 439 aaKnown RBP30.47■■■□□ 2.47
UBTD1-201ENST00000370664 THUMPD2Q9BTF0 503 aaKnown RBP30.47■■■□□ 2.47
UBTD1-201ENST00000370664 SLAIN2Q9P270 581 aa30.47■■■□□ 2.47
UBTD1-201ENST00000370664 TNS3Q68CZ2 1445 aa30.46■■■□□ 2.47
UBTD1-201ENST00000370664 PLEKHG5O94827 1062 aa30.46■■■□□ 2.47
UBTD1-201ENST00000370664 C20orf194Q5TEA3 1177 aa30.46■■■□□ 2.47
UBTD1-201ENST00000370664 CCDC136Q96JN2 1154 aa30.45■■■□□ 2.47
UBTD1-201ENST00000370664 CRBNQ96SW2 442 aa30.45■■■□□ 2.47
UBTD1-201ENST00000370664 IFT57Q9NWB7 429 aa30.45■■■□□ 2.47
UBTD1-201ENST00000370664 GNAI1P63096 354 aa30.44■■■□□ 2.46
UBTD1-201ENST00000370664 MED1Q15648 1581 aaPredicted RBP30.44■■■□□ 2.46
UBTD1-201ENST00000370664 LAS1LQ9Y4W2 734 aaKnown RBP30.43■■■□□ 2.46
UBTD1-201ENST00000370664 SPATA31A3Q5VYP0 1347 aa30.42■■■□□ 2.46
UBTD1-201ENST00000370664 FAM83GA6ND36 823 aa30.42■■■□□ 2.46
UBTD1-201ENST00000370664 ZNF853P0CG23 659 aa30.42■■■□□ 2.46
UBTD1-201ENST00000370664 MTHFSDQ2M296 383 aaKnown RBP30.4■■■□□ 2.46
UBTD1-201ENST00000370664 GAS2L2Q8NHY3 880 aa30.4■■■□□ 2.46
UBTD1-201ENST00000370664 DCTN1Q14203 1278 aa30.39■■■□□ 2.46
UBTD1-201ENST00000370664 CFAP44Q96MT7 982 aa30.39■■■□□ 2.46
UBTD1-201ENST00000370664 CANXP27824 592 aaKnown RBP30.38■■■□□ 2.45
UBTD1-201ENST00000370664 PDE3AQ14432 1141 aa30.36■■■□□ 2.45
UBTD1-201ENST00000370664 NBPF6Q5VWK0 638 aa30.36■■■□□ 2.45
UBTD1-201ENST00000370664 NBPF4Q96M43 638 aa30.36■■■□□ 2.45
UBTD1-201ENST00000370664 USHBP1Q8N6Y0 703 aa30.35■■■□□ 2.45
UBTD1-201ENST00000370664 MBIPQ9NS73 344 aa30.35■■■□□ 2.45
UBTD1-201ENST00000370664 ZC3H6P61129 1189 aaKnown RBP30.34■■■□□ 2.45
UBTD1-201ENST00000370664 SOS2Q07890 1332 aaPredicted RBP30.33■■■□□ 2.45
UBTD1-201ENST00000370664 ANKRD24Q8TF21 1146 aa30.33■■■□□ 2.45
UBTD1-201ENST00000370664 RTF1Q92541 710 aaKnown RBP30.33■■■□□ 2.45
UBTD1-201ENST00000370664 FRAT1Q92837 279 aaPredicted RBP30.33■■■□□ 2.45
UBTD1-201ENST00000370664 BCL2L13Q9BXK5 485 aa30.33■■■□□ 2.45
UBTD1-201ENST00000370664 MCM10Q7L590 875 aa30.33■■■□□ 2.45
UBTD1-201ENST00000370664 HTATSF1O43719 755 aaKnown RBP30.32■■■□□ 2.44
UBTD1-201ENST00000370664 AXIN2Q9Y2T1 843 aa30.31■■■□□ 2.44
UBTD1-201ENST00000370664 LRRC59Q96AG4 307 aaKnown RBP30.3■■■□□ 2.44
UBTD1-201ENST00000370664 ZNF428Q96B54 188 aa30.3■■■□□ 2.44
UBTD1-201ENST00000370664 SMC4Q9NTJ3 1288 aa30.3■■■□□ 2.44
UBTD1-201ENST00000370664 CRYBG1Q9Y4K1 1723 aa30.3■■■□□ 2.44
UBTD1-201ENST00000370664 CABLES1Q8TDN4 633 aa30.29■■■□□ 2.44
UBTD1-201ENST00000370664 SSH1Q8WYL5 1049 aa30.29■■■□□ 2.44
UBTD1-201ENST00000370664 RGPD2P0DJD1 1756 aa30.29■■■□□ 2.44
UBTD1-201ENST00000370664 NCAPD2Q15021 1401 aa30.29■■■□□ 2.44
UBTD1-201ENST00000370664 ALDH1L2Q3SY69 923 aa30.28■■■□□ 2.44
UBTD1-201ENST00000370664 CRB1P82279 1406 aa30.28■■■□□ 2.44
UBTD1-201ENST00000370664 GNAT3A8MTJ3 354 aa30.27■■■□□ 2.44
UBTD1-201ENST00000370664 CHL1O00533 1208 aa30.27■■■□□ 2.44
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms