RNA–Protein interactions for RNA: ENST00000370532.3

CDR1-201, Transcript of cerebellar degeneration related protein 1, humanhuman

APPRIS P1 BASIC

Gene CDR1, Length 2,467 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR1-201ENST00000370532 STK25O00506 426 aa5.94□□□□□ -1.46
CDR1-201ENST00000370532 GTPBP6O43824 516 aaPredicted RBP5.94□□□□□ -1.46
CDR1-201ENST00000370532 PSME1Q06323 249 aa5.94□□□□□ -1.46
CDR1-201ENST00000370532 B4GALNT3Q6L9W6 998 aa5.94□□□□□ -1.46
CDR1-201ENST00000370532 ZFP91Q96JP5 570 aaPredicted RBP5.94□□□□□ -1.46
CDR1-201ENST00000370532 TRPC5Q9UL62 973 aaPredicted RBP5.94□□□□□ -1.46
CDR1-201ENST00000370532 PLCH1Q4KWH8 1693 aa5.94□□□□□ -1.46
CDR1-201ENST00000370532 RGS12O14924 1447 aa5.94□□□□□ -1.46
CDR1-201ENST00000370532 ARHGEF28Q8N1W1 1705 aaKnown RBP5.94□□□□□ -1.46
CDR1-201ENST00000370532 SIN3AQ96ST3 1273 aa5.94□□□□□ -1.46
CDR1-201ENST00000370532 ABCC6O95255 1503 aa5.94□□□□□ -1.46
CDR1-201ENST00000370532 AFF2P51816 1311 aa5.94□□□□□ -1.46
CDR1-201ENST00000370532 HSP90AA1P07900 732 aaKnown RBP5.93□□□□□ -1.46
CDR1-201ENST00000370532 HS6ST3Q8IZP7 471 aa5.93□□□□□ -1.46
CDR1-201ENST00000370532 RBM42Q9BTD8 480 aaKnown RBP5.93□□□□□ -1.46
CDR1-201ENST00000370532 PCDHB8Q9UN66 801 aa5.93□□□□□ -1.46
CDR1-201ENST00000370532 PCDHB13Q9Y5F0 798 aa5.93□□□□□ -1.46
CDR1-201ENST00000370532 LRP5O75197 1615 aa5.93□□□□□ -1.46
CDR1-201ENST00000370532 PPP4R2Q9NY27 417 aa5.93□□□□□ -1.46
CDR1-201ENST00000370532 PCDH10Q9P2E7 1040 aa5.93□□□□□ -1.46
CDR1-201ENST00000370532 SPATA31A3Q5VYP0 1347 aa5.93□□□□□ -1.46
CDR1-201ENST00000370532 RGPD1P0DJD0 1748 aa5.93□□□□□ -1.46
CDR1-201ENST00000370532 UPF1Q92900 1129 aaKnown RBP eCLIP5.92□□□□□ -1.46
CDR1-201ENST00000370532 USP54Q70EL1 1684 aa5.92□□□□□ -1.46
CDR1-201ENST00000370532 RGPD3A6NKT7 1758 aaPredicted RBP5.92□□□□□ -1.46
CDR1-201ENST00000370532 RGPD4Q7Z3J3 1758 aa5.92□□□□□ -1.46
CDR1-201ENST00000370532 RIOK3O14730 519 aaKnown RBP5.92□□□□□ -1.46
CDR1-201ENST00000370532 NAP1L5Q96NT1 182 aaPredicted RBP5.92□□□□□ -1.46
CDR1-201ENST00000370532 THSD7AQ9UPZ6 1657 aa5.91□□□□□ -1.46
CDR1-201ENST00000370532 GLI3P10071 1580 aa5.91□□□□□ -1.46
CDR1-201ENST00000370532 BCL9LQ86UU0 1499 aa5.91□□□□□ -1.46
CDR1-201ENST00000370532 DISP2A7MBM2 1401 aa5.91□□□□□ -1.46
CDR1-201ENST00000370532 ADGRF5Q8IZF2 1346 aa5.91□□□□□ -1.46
CDR1-201ENST00000370532 ONECUT3O60422 494 aaPredicted RBP5.91□□□□□ -1.46
CDR1-201ENST00000370532 CALD1Q05682 793 aaKnown RBP5.91□□□□□ -1.46
CDR1-201ENST00000370532 RGPD8O14715 1765 aaPredicted RBP5.9□□□□□ -1.46
CDR1-201ENST00000370532 PHRF1Q9P1Y6 1649 aaKnown RBP5.9□□□□□ -1.46
CDR1-201ENST00000370532 BLMP54132 1417 aaPredicted RBP5.9□□□□□ -1.47
CDR1-201ENST00000370532 PARD3Q8TEW0 1356 aa5.89□□□□□ -1.47
CDR1-201ENST00000370532 VPS72Q15906 364 aa5.89□□□□□ -1.47
CDR1-201ENST00000370532 FAM212AQ96EL1 285 aa5.89□□□□□ -1.47
CDR1-201ENST00000370532 QTRT2Q9H974 415 aaKnown RBP5.89□□□□□ -1.47
CDR1-201ENST00000370532 STK24Q9Y6E0 443 aa5.89□□□□□ -1.47
CDR1-201ENST00000370532 POLR3AO14802 1390 aaPredicted RBP5.89□□□□□ -1.47
CDR1-201ENST00000370532 PRKAR2AP13861 404 aaKnown RBP5.89□□□□□ -1.47
CDR1-201ENST00000370532 CHMP4AQ9BY43 222 aa5.89□□□□□ -1.47
CDR1-201ENST00000370532 USP21Q9UK80 565 aa5.89□□□□□ -1.47
CDR1-201ENST00000370532 PHF8Q9UPP1 1060 aa5.89□□□□□ -1.47
CDR1-201ENST00000370532 FARP1Q9Y4F1 1045 aaPredicted RBP5.89□□□□□ -1.47
CDR1-201ENST00000370532 RALGAPBQ86X10 1494 aa5.89□□□□□ -1.47
CDR1-201ENST00000370532 QRICH2Q9H0J4 1663 aa5.89□□□□□ -1.47
CDR1-201ENST00000370532 GPRASP1Q5JY77 1395 aa5.89□□□□□ -1.47
CDR1-201ENST00000370532 NUTM2DQ5VT03 806 aaPredicted RBP5.88□□□□□ -1.47
CDR1-201ENST00000370532 NPM2Q86SE8 214 aaKnown RBP5.88□□□□□ -1.47
CDR1-201ENST00000370532 UNC5CLQ8IV45 518 aa5.88□□□□□ -1.47
CDR1-201ENST00000370532 IPO4Q8TEX9 1081 aaKnown RBP5.88□□□□□ -1.47
CDR1-201ENST00000370532 TRPM1Q7Z4N2 1603 aa5.88□□□□□ -1.47
CDR1-201ENST00000370532 TONSLQ96HA7 1378 aa5.88□□□□□ -1.47
CDR1-201ENST00000370532 BRWD3Q6RI45 1802 aa5.87□□□□□ -1.47
CDR1-201ENST00000370532 GJD4Q96KN9 370 aaPredicted RBP5.87□□□□□ -1.47
CDR1-201ENST00000370532 CPDO75976 1380 aa5.87□□□□□ -1.47
CDR1-201ENST00000370532 PPM1GO15355 546 aaPredicted RBP5.87□□□□□ -1.47
CDR1-201ENST00000370532 DDX10Q13206 875 aaKnown RBP5.87□□□□□ -1.47
CDR1-201ENST00000370532 ESCO1Q5FWF5 840 aa5.87□□□□□ -1.47
CDR1-201ENST00000370532 KRT28Q7Z3Y7 464 aa5.87□□□□□ -1.47
CDR1-201ENST00000370532 RBM33Q96EV2 1170 aaKnown RBP5.87□□□□□ -1.47
CDR1-201ENST00000370532 ORAI2Q96SN7 254 aa5.87□□□□□ -1.47
CDR1-201ENST00000370532 PARP4Q9UKK3 1724 aaKnown RBP5.87□□□□□ -1.47
CDR1-201ENST00000370532 CCDC61Q9Y6R9 512 aa5.87□□□□□ -1.47
CDR1-201ENST00000370532 WNK3Q9BYP7 1800 aa5.87□□□□□ -1.47
CDR1-201ENST00000370532 LMO7Q8WWI1 1683 aa5.87□□□□□ -1.47
CDR1-201ENST00000370532 SBNO2Q9Y2G9 1366 aa5.87□□□□□ -1.47
CDR1-201ENST00000370532 NFKBIBQ15653 356 aa5.86□□□□□ -1.47
CDR1-201ENST00000370532 L3MBTL2Q969R5 705 aa5.86□□□□□ -1.47
CDR1-201ENST00000370532 TRPC6Q9Y210 931 aa5.86□□□□□ -1.47
CDR1-201ENST00000370532 SLIT3O75094 1523 aa5.86□□□□□ -1.47
CDR1-201ENST00000370532 AKAP12Q02952 1782 aa5.86□□□□□ -1.47
CDR1-201ENST00000370532 PLEKHH1Q9ULM0 1364 aa5.86□□□□□ -1.47
CDR1-201ENST00000370532 NRKQ7Z2Y5 1582 aa5.86□□□□□ -1.47
CDR1-201ENST00000370532 BCL9O00512 1426 aa5.86□□□□□ -1.47
CDR1-201ENST00000370532 PLEKHG3A1L390 1219 aa5.86□□□□□ -1.47
CDR1-201ENST00000370532 CANXP27824 592 aaKnown RBP5.86□□□□□ -1.47
CDR1-201ENST00000370532 C8orf37Q96NL8 207 aa5.86□□□□□ -1.47
CDR1-201ENST00000370532 PUS7Q96PZ0 661 aaKnown RBP5.86□□□□□ -1.47
CDR1-201ENST00000370532 TNS1Q9HBL0 1735 aaKnown RBP5.86□□□□□ -1.47
CDR1-201ENST00000370532 RREB1Q92766 1687 aa5.85□□□□□ -1.47
CDR1-201ENST00000370532 WASLO00401 505 aaPredicted RBP5.85□□□□□ -1.47
CDR1-201ENST00000370532 PPP1R37O75864 691 aa5.85□□□□□ -1.47
CDR1-201ENST00000370532 CENPJQ9HC77 1338 aaPredicted RBP5.85□□□□□ -1.47
CDR1-201ENST00000370532 NUTM2BA6NNL0 878 aaPredicted RBP5.85□□□□□ -1.47
CDR1-201ENST00000370532 NUTM2EB1AL46 878 aaPredicted RBP5.85□□□□□ -1.47
CDR1-201ENST00000370532 NUTM2AQ8IVF1 878 aaPredicted RBP5.85□□□□□ -1.47
CDR1-201ENST00000370532 PNNQ9H307 717 aaKnown RBP5.85□□□□□ -1.47
CDR1-201ENST00000370532 USP19O94966 1318 aa5.84□□□□□ -1.47
CDR1-201ENST00000370532 BRD2P25440 801 aaKnown RBP5.84□□□□□ -1.47
CDR1-201ENST00000370532 RGL3Q3MIN7 710 aa5.84□□□□□ -1.47
CDR1-201ENST00000370532 IFNL1Q8IU54 200 aa5.84□□□□□ -1.47
CDR1-201ENST00000370532 PIP4P2Q8N4L2 257 aa5.84□□□□□ -1.47
CDR1-201ENST00000370532 ZNF830Q96NB3 372 aaPredicted RBP5.84□□□□□ -1.47
CDR1-201ENST00000370532 ZHX1Q9UKY1 873 aaPredicted RBP5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms