RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 TRIM22Q8IYM9 498 aa14.7□□□□□ -0.06
HCFC1-202ENST00000369984 BRD4O60885 1362 aaPredicted RBP14.7□□□□□ -0.06
HCFC1-202ENST00000369984 GOLGA6L10A0A0M3HER8 536 aa14.69□□□□□ -0.06
HCFC1-202ENST00000369984 IBSPP21815 317 aaPredicted RBP14.69□□□□□ -0.06
HCFC1-202ENST00000369984 KRT85P78386 507 aa14.69□□□□□ -0.06
HCFC1-202ENST00000369984 CCDC102AQ96A19 550 aa14.69□□□□□ -0.06
HCFC1-202ENST00000369984 SMG6Q86US8 1419 aaKnown RBP14.69□□□□□ -0.06
HCFC1-202ENST00000369984 K7ELQ4 463 aaPredicted RBP14.69□□□□□ -0.06
HCFC1-202ENST00000369984 CCDC158Q5M9N0 1113 aa14.68□□□□□ -0.06
HCFC1-202ENST00000369984 GCC1Q96CN9 775 aa14.68□□□□□ -0.06
HCFC1-202ENST00000369984 KIAA1328Q86T90 577 aa14.68□□□□□ -0.06
HCFC1-202ENST00000369984 NOB1Q9ULX3 412 aaKnown RBP14.68□□□□□ -0.06
HCFC1-202ENST00000369984 CNNM1Q9NRU3 951 aa14.68□□□□□ -0.06
HCFC1-202ENST00000369984 NUTM2GQ5VZR2 741 aa14.67□□□□□ -0.06
HCFC1-202ENST00000369984 PDZRN3Q9UPQ7 1066 aa14.67□□□□□ -0.06
HCFC1-202ENST00000369984 MAP4K4O95819 1239 aaPredicted RBP14.67□□□□□ -0.06
HCFC1-202ENST00000369984 CFAP45Q9UL16 551 aa14.67□□□□□ -0.06
HCFC1-202ENST00000369984 LARP1BQ659C4 914 aaKnown RBP14.67□□□□□ -0.06
HCFC1-202ENST00000369984 GNL3LQ9NVN8 582 aaKnown RBP14.66□□□□□ -0.06
HCFC1-202ENST00000369984 RRP9O43818 475 aaKnown RBP14.66□□□□□ -0.06
HCFC1-202ENST00000369984 WASHC2AQ641Q2 1341 aa14.66□□□□□ -0.06
HCFC1-202ENST00000369984 ADAMTS8Q9UP79 889 aa14.66□□□□□ -0.06
HCFC1-202ENST00000369984 FAM177BA6PVY3 158 aa14.66□□□□□ -0.06
HCFC1-202ENST00000369984 SPATA32Q96LK8 384 aa14.65□□□□□ -0.06
HCFC1-202ENST00000369984 ATF3P18847 181 aa14.65□□□□□ -0.06
HCFC1-202ENST00000369984 IPO4Q8TEX9 1081 aaKnown RBP14.65□□□□□ -0.06
HCFC1-202ENST00000369984 CABP2Q9NPB3 220 aa14.65□□□□□ -0.06
HCFC1-202ENST00000369984 SLC26A8Q96RN1 970 aa14.65□□□□□ -0.06
HCFC1-202ENST00000369984 TNNT1P13805 278 aa14.65□□□□□ -0.06
HCFC1-202ENST00000369984 AKNAQ7Z591 1439 aa14.65□□□□□ -0.06
HCFC1-202ENST00000369984 GGNBP2Q9H3C7 697 aa14.65□□□□□ -0.06
HCFC1-202ENST00000369984 NLRP2Q9NX02 1062 aa14.65□□□□□ -0.06
HCFC1-202ENST00000369984 MATR3P43243 847 aaKnown RBP eCLIP14.64□□□□□ -0.07
HCFC1-202ENST00000369984 EPB41L2O43491 1005 aaKnown RBP14.64□□□□□ -0.07
HCFC1-202ENST00000369984 MTHFSP49914 203 aa14.64□□□□□ -0.07
HCFC1-202ENST00000369984 ZNF397Q8NF99 534 aaPredicted RBP14.64□□□□□ -0.07
HCFC1-202ENST00000369984 CCDC148Q8NFR7 591 aa14.64□□□□□ -0.07
HCFC1-202ENST00000369984 DESP17661 470 aa14.64□□□□□ -0.07
HCFC1-202ENST00000369984 RRBP1Q9P2E9 1410 aaKnown RBP14.64□□□□□ -0.07
HCFC1-202ENST00000369984 FEZ1Q99689 392 aa14.64□□□□□ -0.07
HCFC1-202ENST00000369984 NUP133Q8WUM0 1156 aa14.64□□□□□ -0.07
HCFC1-202ENST00000369984 JAKMIP3Q5VZ66 844 aa14.63□□□□□ -0.07
HCFC1-202ENST00000369984 CEP57L1Q8IYX8 460 aa14.63□□□□□ -0.07
HCFC1-202ENST00000369984 NACAP1Q9BZK3 213 aa14.63□□□□□ -0.07
HCFC1-202ENST00000369984 CCDC91Q7Z6B0 441 aa14.63□□□□□ -0.07
HCFC1-202ENST00000369984 CDKL5O76039 1030 aa14.63□□□□□ -0.07
HCFC1-202ENST00000369984 SIL1Q9H173 461 aa14.63□□□□□ -0.07
HCFC1-202ENST00000369984 MAP2K1Q02750 393 aaPredicted RBP14.63□□□□□ -0.07
HCFC1-202ENST00000369984 GAS2L2Q8NHY3 880 aa14.63□□□□□ -0.07
HCFC1-202ENST00000369984 NOL7Q9UMY1 257 aaKnown RBP14.63□□□□□ -0.07
HCFC1-202ENST00000369984 SMTNL1A8MU46 457 aa14.62□□□□□ -0.07
HCFC1-202ENST00000369984 UPF3BQ9BZI7 483 aaKnown RBP14.62□□□□□ -0.07
HCFC1-202ENST00000369984 NUP62CLQ9H1M0 184 aa14.62□□□□□ -0.07
HCFC1-202ENST00000369984 PPM1EQ8WY54 764 aa14.62□□□□□ -0.07
HCFC1-202ENST00000369984 JPH4Q96JJ6 628 aa14.62□□□□□ -0.07
HCFC1-202ENST00000369984 CEP63Q96MT8 703 aa14.62□□□□□ -0.07
HCFC1-202ENST00000369984 TMCO3Q6UWJ1 677 aa14.62□□□□□ -0.07
HCFC1-202ENST00000369984 PDCL2Q8N4E4 241 aa14.62□□□□□ -0.07
HCFC1-202ENST00000369984 TWISTNBQ3B726 338 aaPredicted RBP14.61□□□□□ -0.07
HCFC1-202ENST00000369984 PRDM10Q9NQV6 1147 aa14.61□□□□□ -0.07
HCFC1-202ENST00000369984 MYOM3Q5VTT5 1437 aa14.61□□□□□ -0.07
HCFC1-202ENST00000369984 CRACR2AQ9BSW2 395 aa14.61□□□□□ -0.07
HCFC1-202ENST00000369984 CDCA7LQ96GN5 454 aa14.61□□□□□ -0.07
HCFC1-202ENST00000369984 SSR1P43307 286 aaKnown RBP14.61□□□□□ -0.07
HCFC1-202ENST00000369984 CASQ1P31415 396 aa14.61□□□□□ -0.07
HCFC1-202ENST00000369984 CCT4P50991 539 aaKnown RBP14.61□□□□□ -0.07
HCFC1-202ENST00000369984 SOGA3Q5TF21 947 aa14.61□□□□□ -0.07
HCFC1-202ENST00000369984 ABTB2Q8N961 1025 aa14.61□□□□□ -0.07
HCFC1-202ENST00000369984 EIF5P55010 431 aaKnown RBP14.6□□□□□ -0.07
HCFC1-202ENST00000369984 ARHGAP29Q52LW3 1261 aa14.6□□□□□ -0.07
HCFC1-202ENST00000369984 TCP11L2Q8N4U5 519 aa14.6□□□□□ -0.07
HCFC1-202ENST00000369984 SHTN1A0MZ66 631 aa14.6□□□□□ -0.07
HCFC1-202ENST00000369984 FKBP4Q02790 459 aaKnown RBP eCLIP14.6□□□□□ -0.07
HCFC1-202ENST00000369984 BMP2KQ9NSY1 1161 aaPredicted RBP14.6□□□□□ -0.07
HCFC1-202ENST00000369984 ARHGAP5Q13017 1502 aa14.6□□□□□ -0.07
HCFC1-202ENST00000369984 SRCIN1Q9C0H9 1055 aa14.6□□□□□ -0.07
HCFC1-202ENST00000369984 FILIP1Q7Z7B0 1213 aa14.6□□□□□ -0.07
HCFC1-202ENST00000369984 UBXN4Q92575 508 aa14.6□□□□□ -0.07
HCFC1-202ENST00000369984 SUPT6HQ7KZ85 1726 aaKnown RBP14.6□□□□□ -0.07
HCFC1-202ENST00000369984 NEBLO76041 1014 aa14.6□□□□□ -0.07
HCFC1-202ENST00000369984 MAP9Q49MG5 647 aa14.59□□□□□ -0.07
HCFC1-202ENST00000369984 TAF4BQ92750 862 aa14.59□□□□□ -0.07
HCFC1-202ENST00000369984 FYCO1Q9BQS8 1478 aa14.59□□□□□ -0.07
HCFC1-202ENST00000369984 PDE3AQ14432 1141 aa14.59□□□□□ -0.07
HCFC1-202ENST00000369984 TRIM21P19474 475 aaKnown RBP14.59□□□□□ -0.07
HCFC1-202ENST00000369984 CCDC57Q2TAC2 916 aa14.59□□□□□ -0.07
HCFC1-202ENST00000369984 STAMBPO95630 424 aa14.59□□□□□ -0.07
HCFC1-202ENST00000369984 SLC4A2P04920 1241 aa14.59□□□□□ -0.07
HCFC1-202ENST00000369984 PDRG1Q9NUG6 133 aa14.59□□□□□ -0.07
HCFC1-202ENST00000369984 CFAP100Q494V2 611 aa14.59□□□□□ -0.07
HCFC1-202ENST00000369984 ZNF428Q96B54 188 aa14.59□□□□□ -0.07
HCFC1-202ENST00000369984 SSBP05455 408 aaKnown RBP eCLIP14.59□□□□□ -0.07
HCFC1-202ENST00000369984 SMARCA4P51532 1647 aa14.59□□□□□ -0.07
HCFC1-202ENST00000369984 ZSCAN25Q6NSZ9 544 aa14.58□□□□□ -0.07
HCFC1-202ENST00000369984 CCDC113Q9H0I3 377 aa14.58□□□□□ -0.07
HCFC1-202ENST00000369984 SYCE3A1L190 88 aa14.58□□□□□ -0.07
HCFC1-202ENST00000369984 ESPNB1AK53 854 aa14.58□□□□□ -0.07
HCFC1-202ENST00000369984 BLOC1S2Q6QNY1 142 aa14.58□□□□□ -0.07
HCFC1-202ENST00000369984 CWC27Q6UX04 472 aaKnown RBP14.58□□□□□ -0.07
HCFC1-202ENST00000369984 EXOSC9Q06265 439 aaKnown RBP14.58□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms