RNA–Protein interactions for RNA: ENST00000369682.4

PLXNA3-201, Transcript of plexin A3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PLXNA3, Length 10,885 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PLXNA3-201ENST00000369682 VPS37DQ86XT2 251 aa13.75□□□□□ -0.21
PLXNA3-201ENST00000369682 RALYLQ86SE5 291 aaKnown RBP13.75□□□□□ -0.21
PLXNA3-201ENST00000369682 LEKR1Q6ZMV7 388 aa13.75□□□□□ -0.21
PLXNA3-201ENST00000369682 C16orf45Q96MC5 204 aaPredicted RBP13.75□□□□□ -0.21
PLXNA3-201ENST00000369682 HDAC5Q9UQL6 1122 aa13.75□□□□□ -0.21
PLXNA3-201ENST00000369682 DNMBPQ6XZF7 1577 aa13.74□□□□□ -0.21
PLXNA3-201ENST00000369682 SLC4A2P04920 1241 aa13.74□□□□□ -0.21
PLXNA3-201ENST00000369682 CASTP20810 708 aaKnown RBP13.74□□□□□ -0.21
PLXNA3-201ENST00000369682 TOPBP1Q92547 1522 aa13.74□□□□□ -0.21
PLXNA3-201ENST00000369682 IGSF3O75054 1194 aa13.74□□□□□ -0.21
PLXNA3-201ENST00000369682 USP25Q9UHP3 1055 aa13.74□□□□□ -0.21
PLXNA3-201ENST00000369682 CKAP2LQ8IYA6 745 aa13.73□□□□□ -0.21
PLXNA3-201ENST00000369682 SRRTQ9BXP5 876 aaKnown RBP13.73□□□□□ -0.21
PLXNA3-201ENST00000369682 HFM1A2PYH4 1435 aa13.73□□□□□ -0.21
PLXNA3-201ENST00000369682 IQGAP2Q13576 1575 aa13.73□□□□□ -0.21
PLXNA3-201ENST00000369682 SAFBQ15424 915 aaKnown RBP eCLIP13.73□□□□□ -0.21
PLXNA3-201ENST00000369682 GRIN2BQ13224 1484 aa13.73□□□□□ -0.21
PLXNA3-201ENST00000369682 PDE3AQ14432 1141 aa13.73□□□□□ -0.21
PLXNA3-201ENST00000369682 LARP1BQ659C4 914 aaKnown RBP13.73□□□□□ -0.21
PLXNA3-201ENST00000369682 ACBD3Q9H3P7 528 aa13.73□□□□□ -0.21
PLXNA3-201ENST00000369682 RRS1Q15050 365 aaKnown RBP13.72□□□□□ -0.21
PLXNA3-201ENST00000369682 CPLX2Q6PUV4 134 aaKnown RBP13.72□□□□□ -0.21
PLXNA3-201ENST00000369682 EXOC6BQ9Y2D4 811 aa13.72□□□□□ -0.21
PLXNA3-201ENST00000369682 GPRASP1Q5JY77 1395 aa13.71□□□□□ -0.21
PLXNA3-201ENST00000369682 UBE2Q2Q8WVN8 375 aa13.71□□□□□ -0.21
PLXNA3-201ENST00000369682 EPS15P42566 896 aa13.71□□□□□ -0.21
PLXNA3-201ENST00000369682 LETM1O95202 739 aaPredicted RBP13.71□□□□□ -0.21
PLXNA3-201ENST00000369682 IGHDP01880 384 aa13.71□□□□□ -0.21
PLXNA3-201ENST00000369682 CT47B1P0C2W7 299 aaPredicted RBP13.71□□□□□ -0.21
PLXNA3-201ENST00000369682 SPATA32Q96LK8 384 aa13.71□□□□□ -0.21
PLXNA3-201ENST00000369682 DAPK1P53355 1430 aa13.71□□□□□ -0.21
PLXNA3-201ENST00000369682 SYNJ2O15056 1496 aa13.71□□□□□ -0.22
PLXNA3-201ENST00000369682 RDXP35241 583 aaKnown RBP13.71□□□□□ -0.22
PLXNA3-201ENST00000369682 PDRG1Q9NUG6 133 aa13.71□□□□□ -0.22
PLXNA3-201ENST00000369682 CYP46A1Q9Y6A2 500 aa13.71□□□□□ -0.22
PLXNA3-201ENST00000369682 GNAI2P04899 355 aa13.7□□□□□ -0.22
PLXNA3-201ENST00000369682 DCTN1Q14203 1278 aa13.7□□□□□ -0.22
PLXNA3-201ENST00000369682 AACSQ86V21 672 aa13.7□□□□□ -0.22
PLXNA3-201ENST00000369682 CCDC102AQ96A19 550 aa13.7□□□□□ -0.22
PLXNA3-201ENST00000369682 KIF14Q15058 1648 aa13.7□□□□□ -0.22
PLXNA3-201ENST00000369682 HMGXB3Q12766 1538 aa13.7□□□□□ -0.22
PLXNA3-201ENST00000369682 SLFN5Q08AF3 891 aa13.7□□□□□ -0.22
PLXNA3-201ENST00000369682 WDR33Q9C0J8 1336 aaKnown RBP13.7□□□□□ -0.22
PLXNA3-201ENST00000369682 TAF3Q5VWG9 929 aa13.7□□□□□ -0.22
PLXNA3-201ENST00000369682 CCDC83Q8IWF9 413 aa13.7□□□□□ -0.22
PLXNA3-201ENST00000369682 PSMA5P28066 241 aa13.7□□□□□ -0.22
PLXNA3-201ENST00000369682 ATF7IPQ6VMQ6 1270 aa13.7□□□□□ -0.22
PLXNA3-201ENST00000369682 CCDC85AQ96PX6 553 aaPredicted RBP13.7□□□□□ -0.22
PLXNA3-201ENST00000369682 TCEAL9Q9UHQ7 104 aa13.7□□□□□ -0.22
PLXNA3-201ENST00000369682 KIAA1107Q9UPP5 1409 aa13.7□□□□□ -0.22
PLXNA3-201ENST00000369682 CALRP27797 417 aaKnown RBP13.7□□□□□ -0.22
PLXNA3-201ENST00000369682 NCAPD3P42695 1498 aa13.69□□□□□ -0.22
PLXNA3-201ENST00000369682 NUP62CLQ9H1M0 184 aa13.69□□□□□ -0.22
PLXNA3-201ENST00000369682 POLA1P09884 1462 aaPredicted RBP13.69□□□□□ -0.22
PLXNA3-201ENST00000369682 GTF2F1P35269 517 aaKnown RBP eCLIP13.69□□□□□ -0.223e-6■■□□□ 14
PLXNA3-201ENST00000369682 HSP90AB2PQ58FF8 381 aa13.69□□□□□ -0.22
PLXNA3-201ENST00000369682 PRXQ9BXM0 1461 aa13.69□□□□□ -0.22
PLXNA3-201ENST00000369682 SULT6B1Q6IMI4 303 aa13.68□□□□□ -0.22
PLXNA3-201ENST00000369682 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.68□□□□□ -0.22
PLXNA3-201ENST00000369682 V9GYY5 206 aaPredicted RBP13.68□□□□□ -0.22
PLXNA3-201ENST00000369682 SSH1Q8WYL5 1049 aa13.68□□□□□ -0.22
PLXNA3-201ENST00000369682 SETD1BQ9UPS6 1966 aaKnown RBP13.68□□□□□ -0.22
PLXNA3-201ENST00000369682 RAB11FIP4Q86YS3 637 aa13.68□□□□□ -0.22
PLXNA3-201ENST00000369682 LRRCC1Q9C099 1032 aa13.68□□□□□ -0.22
PLXNA3-201ENST00000369682 DNA2P51530 1060 aa13.68□□□□□ -0.22
PLXNA3-201ENST00000369682 GUCY1B3Q02153 619 aa13.68□□□□□ -0.22
PLXNA3-201ENST00000369682 ZFYVE27Q5T4F4 411 aa13.68□□□□□ -0.22
PLXNA3-201ENST00000369682 PRAM1Q96QH2 718 aa13.68□□□□□ -0.22
PLXNA3-201ENST00000369682 PRG4Q92954 1404 aaPredicted RBP13.68□□□□□ -0.22
PLXNA3-201ENST00000369682 ZNF396Q96N95 335 aaPredicted RBP13.68□□□□□ -0.22
PLXNA3-201ENST00000369682 ERICH2A1L162 156 aa13.67□□□□□ -0.22
PLXNA3-201ENST00000369682 PSME1Q06323 249 aa13.67□□□□□ -0.22
PLXNA3-201ENST00000369682 NLRP2Q9NX02 1062 aa13.67□□□□□ -0.22
PLXNA3-201ENST00000369682 CT47A1Q5JQC4 288 aaPredicted RBP13.67□□□□□ -0.22
PLXNA3-201ENST00000369682 OFD1O75665 1012 aa13.67□□□□□ -0.22
PLXNA3-201ENST00000369682 NSD3Q9BZ95 1437 aa13.67□□□□□ -0.22
PLXNA3-201ENST00000369682 DDX58O95786 925 aaKnown RBP13.67□□□□□ -0.22
PLXNA3-201ENST00000369682 PPFIBP1Q86W92 1011 aa13.67□□□□□ -0.22
PLXNA3-201ENST00000369682 CWC22Q9HCG8 908 aaKnown RBP13.67□□□□□ -0.22
PLXNA3-201ENST00000369682 XRCC6P12956 609 aaKnown RBP eCLIP13.67□□□□□ -0.226e-6■□□□□ 9.2
PLXNA3-201ENST00000369682 EVA1CP58658 441 aa13.67□□□□□ -0.22
PLXNA3-201ENST00000369682 PRPF40BQ6NWY9 871 aaKnown RBP13.67□□□□□ -0.22
PLXNA3-201ENST00000369682 MYL6BP14649 208 aa13.66□□□□□ -0.22
PLXNA3-201ENST00000369682 KRT85P78386 507 aa13.66□□□□□ -0.22
PLXNA3-201ENST00000369682 CAMSAP2Q08AD1 1489 aa13.66□□□□□ -0.22
PLXNA3-201ENST00000369682 EPRSP07814 1512 aaKnown RBP13.66□□□□□ -0.22
PLXNA3-201ENST00000369682 BIN1O00499 593 aa13.66□□□□□ -0.22
PLXNA3-201ENST00000369682 GCC1Q96CN9 775 aa13.66□□□□□ -0.22
PLXNA3-201ENST00000369682 LRRFIP2Q9Y608 721 aaKnown RBP13.66□□□□□ -0.22
PLXNA3-201ENST00000369682 MCM10Q7L590 875 aa13.66□□□□□ -0.22
PLXNA3-201ENST00000369682 GPATCH11Q8N954 259 aa13.66□□□□□ -0.22
PLXNA3-201ENST00000369682 NUP133Q8WUM0 1156 aa13.66□□□□□ -0.22
PLXNA3-201ENST00000369682 BIVM-ERCC5R4GMW8 1640 aa13.65□□□□□ -0.22
PLXNA3-201ENST00000369682 SNAPC4Q5SXM2 1469 aa13.65□□□□□ -0.22
PLXNA3-201ENST00000369682 CLASRPQ8N2M8 674 aaKnown RBP13.65□□□□□ -0.22
PLXNA3-201ENST00000369682 MRC2Q9UBG0 1479 aa13.65□□□□□ -0.22
PLXNA3-201ENST00000369682 AK9Q5TCS8 1911 aa13.65□□□□□ -0.22
PLXNA3-201ENST00000369682 LIG1P18858 919 aa13.65□□□□□ -0.22
PLXNA3-201ENST00000369682 ZSCAN23Q3MJ62 389 aa13.65□□□□□ -0.22
PLXNA3-201ENST00000369682 MAP3K11Q16584 847 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms