RNA–Protein interactions for RNA: ENST00000368210.7

PTPRK-204, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPRK, Length 5,025 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-204ENST00000368210 CREBRFQ8IUR6 639 aa15.93■□□□□ 0.14
PTPRK-204ENST00000368210 VPS37DQ86XT2 251 aa15.93■□□□□ 0.14
PTPRK-204ENST00000368210 ERC1Q8IUD2 1116 aa15.93■□□□□ 0.14
PTPRK-204ENST00000368210 RPAP2Q8IXW5 612 aaPredicted RBP15.93■□□□□ 0.14
PTPRK-204ENST00000368210 TRAK2O60296 914 aa15.92■□□□□ 0.14
PTPRK-204ENST00000368210 CLSTN1O94985 981 aa15.92■□□□□ 0.14
PTPRK-204ENST00000368210 WASHC4Q2M389 1173 aa15.92■□□□□ 0.14
PTPRK-204ENST00000368210 KDM5BQ9UGL1 1544 aa15.92■□□□□ 0.14
PTPRK-204ENST00000368210 WASLO00401 505 aaPredicted RBP15.92■□□□□ 0.14
PTPRK-204ENST00000368210 PSMA5P28066 241 aa15.92■□□□□ 0.14
PTPRK-204ENST00000368210 EMILIN1Q9Y6C2 1016 aa15.92■□□□□ 0.14
PTPRK-204ENST00000368210 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.92■□□□□ 0.14
PTPRK-204ENST00000368210 ITSN2Q9NZM3 1697 aa15.91■□□□□ 0.14
PTPRK-204ENST00000368210 RALYLQ86SE5 291 aaKnown RBP15.91■□□□□ 0.14
PTPRK-204ENST00000368210 DCTN1Q14203 1278 aa15.91■□□□□ 0.14
PTPRK-204ENST00000368210 IFT57Q9NWB7 429 aa15.91■□□□□ 0.14
PTPRK-204ENST00000368210 ALDH1L2Q3SY69 923 aa15.9■□□□□ 0.14
PTPRK-204ENST00000368210 MCM10Q7L590 875 aa15.9■□□□□ 0.14
PTPRK-204ENST00000368210 NSD2O96028 1365 aa15.9■□□□□ 0.14
PTPRK-204ENST00000368210 LRPPRCP42704 1394 aaKnown RBP15.9■□□□□ 0.14
PTPRK-204ENST00000368210 UQCRHLA0A096LP55 91 aa15.89■□□□□ 0.13
PTPRK-204ENST00000368210 MARCH6O60337 910 aa15.89■□□□□ 0.13
PTPRK-204ENST00000368210 UQCRHP07919 91 aa15.89■□□□□ 0.13
PTPRK-204ENST00000368210 HIP1O00291 1037 aa15.89■□□□□ 0.13
PTPRK-204ENST00000368210 DUOX2Q9NRD8 1548 aa15.89■□□□□ 0.13
PTPRK-204ENST00000368210 SYCP2Q9BX26 1530 aa15.89■□□□□ 0.13
PTPRK-204ENST00000368210 GNAT3A8MTJ3 354 aa15.89■□□□□ 0.13
PTPRK-204ENST00000368210 NFXL1Q6ZNB6 911 aa15.89■□□□□ 0.13
PTPRK-204ENST00000368210 SKAP1Q86WV1 359 aa15.89■□□□□ 0.13
PTPRK-204ENST00000368210 CFAP43Q8NDM7 1665 aa15.89■□□□□ 0.13
PTPRK-204ENST00000368210 PRAG1Q86YV5 1406 aa15.89■□□□□ 0.13
PTPRK-204ENST00000368210 NOL10Q9BSC4 688 aaKnown RBP15.89■□□□□ 0.13
PTPRK-204ENST00000368210 ADAMTS12P58397 1594 aa15.89■□□□□ 0.13
PTPRK-204ENST00000368210 WDR62O43379 1518 aa15.88■□□□□ 0.13
PTPRK-204ENST00000368210 KIAA0556O60303 1618 aa15.88■□□□□ 0.13
PTPRK-204ENST00000368210 STRN4Q9NRL3 753 aa15.88■□□□□ 0.13
PTPRK-204ENST00000368210 MIS18AQ9NYP9 233 aa15.88■□□□□ 0.13
PTPRK-204ENST00000368210 NOC3LQ8WTT2 800 aaKnown RBP15.88■□□□□ 0.13
PTPRK-204ENST00000368210 SPG7Q9UQ90 795 aa15.88■□□□□ 0.13
PTPRK-204ENST00000368210 SRGAP3O43295 1099 aa15.88■□□□□ 0.13
PTPRK-204ENST00000368210 AMOTL1Q8IY63 956 aa15.88■□□□□ 0.13
PTPRK-204ENST00000368210 PPP6R1Q9UPN7 881 aa15.88■□□□□ 0.13
PTPRK-204ENST00000368210 DNAJC2Q99543 621 aaKnown RBP15.88■□□□□ 0.13
PTPRK-204ENST00000368210 ARGLU1Q9NWB6 273 aaPredicted RBP15.88■□□□□ 0.13
PTPRK-204ENST00000368210 XPCQ01831 940 aaPredicted RBP15.87■□□□□ 0.13
PTPRK-204ENST00000368210 CABP4P57796 275 aa15.87■□□□□ 0.13
PTPRK-204ENST00000368210 BTBD11A6QL63 1104 aa15.87■□□□□ 0.13
PTPRK-204ENST00000368210 KCNH5Q8NCM2 988 aa15.87■□□□□ 0.13
PTPRK-204ENST00000368210 TPD52L1Q16890 204 aaPredicted RBP15.86■□□□□ 0.13
PTPRK-204ENST00000368210 NUP160Q12769 1436 aa15.86■□□□□ 0.13
PTPRK-204ENST00000368210 ERICH2A1L162 156 aa15.86■□□□□ 0.13
PTPRK-204ENST00000368210 TOM1L2Q6ZVM7 507 aa15.86■□□□□ 0.13
PTPRK-204ENST00000368210 AMOTL2Q9Y2J4 779 aa15.86■□□□□ 0.13
PTPRK-204ENST00000368210 K7ELQ4 463 aaPredicted RBP15.86■□□□□ 0.13
PTPRK-204ENST00000368210 FOSBP53539 338 aa15.86■□□□□ 0.13
PTPRK-204ENST00000368210 RBM42Q9BTD8 480 aaKnown RBP15.86■□□□□ 0.13
PTPRK-204ENST00000368210 CCDC73Q6ZRK6 1079 aa15.86■□□□□ 0.13
PTPRK-204ENST00000368210 MBD3O95983 291 aa15.85■□□□□ 0.13
PTPRK-204ENST00000368210 SIL1Q9H173 461 aa15.85■□□□□ 0.13
PTPRK-204ENST00000368210 ZHX1Q9UKY1 873 aaPredicted RBP15.85■□□□□ 0.13
PTPRK-204ENST00000368210 MYL6BP14649 208 aa15.85■□□□□ 0.13
PTPRK-204ENST00000368210 ZC3H6P61129 1189 aaKnown RBP15.85■□□□□ 0.13
PTPRK-204ENST00000368210 PES1O00541 588 aaKnown RBP15.84■□□□□ 0.13
PTPRK-204ENST00000368210 CAVIN1Q6NZI2 390 aaKnown RBP15.84■□□□□ 0.13
PTPRK-204ENST00000368210 SASS6Q6UVJ0 657 aa15.84■□□□□ 0.13
PTPRK-204ENST00000368210 IL1RAPL2Q9NP60 686 aa15.84■□□□□ 0.13
PTPRK-204ENST00000368210 PRDM11Q9NQV5 511 aa15.84■□□□□ 0.13
PTPRK-204ENST00000368210 TRIM27P14373 513 aa15.84■□□□□ 0.13
PTPRK-204ENST00000368210 PDCP20941 246 aa15.84■□□□□ 0.13
PTPRK-204ENST00000368210 KIF6Q6ZMV9 814 aa15.84■□□□□ 0.13
PTPRK-204ENST00000368210 DDX54Q8TDD1 881 aaKnown RBP15.84■□□□□ 0.13
PTPRK-204ENST00000368210 TRAPPC8Q9Y2L5 1435 aa15.84■□□□□ 0.13
PTPRK-204ENST00000368210 TESK2Q96S53 571 aa15.84■□□□□ 0.13
PTPRK-204ENST00000368210 CWC22Q9HCG8 908 aaKnown RBP15.84■□□□□ 0.13
PTPRK-204ENST00000368210 EXOC6BQ9Y2D4 811 aa15.84■□□□□ 0.13
PTPRK-204ENST00000368210 PRPF40AO75400 957 aaKnown RBP15.83■□□□□ 0.13
PTPRK-204ENST00000368210 ASXL2Q76L83 1435 aa15.83■□□□□ 0.12
PTPRK-204ENST00000368210 ZNF592Q92610 1267 aa15.83■□□□□ 0.12
PTPRK-204ENST00000368210 GRPEL1Q9HAV7 217 aa15.83■□□□□ 0.12
PTPRK-204ENST00000368210 TPM3P06753 285 aa15.83■□□□□ 0.12
PTPRK-204ENST00000368210 CEBPAP49715 358 aaPredicted RBP15.83■□□□□ 0.12
PTPRK-204ENST00000368210 MAPK8IP2Q13387 824 aaPredicted RBP15.83■□□□□ 0.12
PTPRK-204ENST00000368210 SAFBQ15424 915 aaKnown RBP eCLIP15.83■□□□□ 0.12
PTPRK-204ENST00000368210 AEBP1Q8IUX7 1158 aa15.83■□□□□ 0.12
PTPRK-204ENST00000368210 PARD3Q8TEW0 1356 aa15.82■□□□□ 0.12
PTPRK-204ENST00000368210 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.82■□□□□ 0.12
PTPRK-204ENST00000368210 CCDC27Q2M243 656 aa15.82■□□□□ 0.12
PTPRK-204ENST00000368210 TBC1D2BQ9UPU7 963 aa15.82■□□□□ 0.12
PTPRK-204ENST00000368210 VPS53Q5VIR6 699 aa15.82■□□□□ 0.12
PTPRK-204ENST00000368210 DEF6Q9H4E7 631 aa15.82■□□□□ 0.12
PTPRK-204ENST00000368210 A2MP01023 1474 aa15.82■□□□□ 0.12
PTPRK-204ENST00000368210 FAM177BA6PVY3 158 aa15.82■□□□□ 0.12
PTPRK-204ENST00000368210 RNF214Q8ND24 703 aa15.82■□□□□ 0.12
PTPRK-204ENST00000368210 ANKRD36BQ8N2N9 1353 aa15.81■□□□□ 0.12
PTPRK-204ENST00000368210 PATL2C9JE40 543 aaKnown RBP15.81■□□□□ 0.12
PTPRK-204ENST00000368210 PRDM10Q9NQV6 1147 aa15.81■□□□□ 0.12
PTPRK-204ENST00000368210 CYP46A1Q9Y6A2 500 aa15.81■□□□□ 0.12
PTPRK-204ENST00000368210 MAP4K4O95819 1239 aaPredicted RBP15.81■□□□□ 0.12
PTPRK-204ENST00000368210 TAF7Q15545 349 aaPredicted RBP15.81■□□□□ 0.12
PTPRK-204ENST00000368210 PHF8Q9UPP1 1060 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms