RNA–Protein interactions for RNA: ENST00000362011.6

SHISA4-201, Transcript of shisa family member 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHISA4, Length 1,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA4-201ENST00000362011 SEPT12Q8IYM1 358 aa27.84■■■□□ 2.05
SHISA4-201ENST00000362011 CRYBG1Q9Y4K1 1723 aa27.84■■■□□ 2.05
SHISA4-201ENST00000362011 PHRF1Q9P1Y6 1649 aaKnown RBP27.83■■■□□ 2.05
SHISA4-201ENST00000362011 NLRP6P59044 892 aa27.82■■■□□ 2.04
SHISA4-201ENST00000362011 MRS2Q9HD23 443 aa27.82■■■□□ 2.04
SHISA4-201ENST00000362011 CCDC184Q52MB2 194 aa27.8■■■□□ 2.04
SHISA4-201ENST00000362011 AATKQ6ZMQ8 1374 aa27.79■■■□□ 2.04
SHISA4-201ENST00000362011 FAM83GA6ND36 823 aa27.79■■■□□ 2.04
SHISA4-201ENST00000362011 HAP1P54257 671 aaPredicted RBP27.79■■■□□ 2.04
SHISA4-201ENST00000362011 SLIT3O75094 1523 aa27.79■■■□□ 2.04
SHISA4-201ENST00000362011 NUTM2GQ5VZR2 741 aa27.78■■■□□ 2.04
SHISA4-201ENST00000362011 LMOD2Q6P5Q4 547 aa27.77■■■□□ 2.04
SHISA4-201ENST00000362011 DEFB132Q7Z7B7 95 aa27.77■■■□□ 2.04
SHISA4-201ENST00000362011 NRAPQ86VF7 1730 aa27.76■■■□□ 2.03
SHISA4-201ENST00000362011 SMG6Q86US8 1419 aaKnown RBP27.75■■■□□ 2.03
SHISA4-201ENST00000362011 KRT27Q7Z3Y8 459 aa27.74■■■□□ 2.03
SHISA4-201ENST00000362011 NFAT5O94916 1531 aa27.74■■■□□ 2.03
SHISA4-201ENST00000362011 PEAK1Q9H792 1746 aa27.74■■■□□ 2.03
SHISA4-201ENST00000362011 MTHFSP49914 203 aa27.73■■■□□ 2.03
SHISA4-201ENST00000362011 USP19O94966 1318 aa27.71■■■□□ 2.03
SHISA4-201ENST00000362011 SF3B2Q13435 895 aaKnown RBP27.7■■■□□ 2.03
SHISA4-201ENST00000362011 CFAP53Q96M91 514 aa27.69■■■□□ 2.02
SHISA4-201ENST00000362011 POLKQ9UBT6 870 aa27.69■■■□□ 2.02
SHISA4-201ENST00000362011 CCDC9Q9Y3X0 531 aaKnown RBP27.69■■■□□ 2.02
SHISA4-201ENST00000362011 SOX12O15370 315 aa27.68■■■□□ 2.02
SHISA4-201ENST00000362011 FBLN1P23142 703 aa27.68■■■□□ 2.02
SHISA4-201ENST00000362011 KCNH5Q8NCM2 988 aa27.68■■■□□ 2.02
SHISA4-201ENST00000362011 COL14A1Q05707 1796 aaKnown RBP27.68■■■□□ 2.02
SHISA4-201ENST00000362011 PLEKHG5O94827 1062 aa27.67■■■□□ 2.02
SHISA4-201ENST00000362011 COL3A1P02461 1466 aaPredicted RBP27.67■■■□□ 2.02
SHISA4-201ENST00000362011 RRS1Q15050 365 aaKnown RBP27.67■■■□□ 2.02
SHISA4-201ENST00000362011 BTG4Q9NY30 223 aa27.67■■■□□ 2.02
SHISA4-201ENST00000362011 RGPD5Q99666 1765 aa27.66■■■□□ 2.02
SHISA4-201ENST00000362011 EMILIN1Q9Y6C2 1016 aa27.66■■■□□ 2.02
SHISA4-201ENST00000362011 LRP5O75197 1615 aa27.65■■■□□ 2.02
SHISA4-201ENST00000362011 FAM98CQ17RN3 349 aaKnown RBP27.64■■■□□ 2.01
SHISA4-201ENST00000362011 PPM1GO15355 546 aaPredicted RBP27.63■■■□□ 2.01
SHISA4-201ENST00000362011 PNISRQ8TF01 805 aaKnown RBP27.63■■■□□ 2.01
SHISA4-201ENST00000362011 INSRP06213 1382 aa27.63■■■□□ 2.01
SHISA4-201ENST00000362011 KIF24Q5T7B8 1368 aa27.63■■■□□ 2.01
SHISA4-201ENST00000362011 MAP3K19Q56UN5 1328 aa27.62■■■□□ 2.01
SHISA4-201ENST00000362011 SPATA31A5Q5VU36 1347 aa27.62■■■□□ 2.01
SHISA4-201ENST00000362011 SPATA31A7Q8IWB4 1347 aa27.62■■■□□ 2.01
SHISA4-201ENST00000362011 GCP02774 474 aa27.62■■■□□ 2.01
SHISA4-201ENST00000362011 FAM9BQ8IZU0 186 aa27.62■■■□□ 2.01
SHISA4-201ENST00000362011 THSD7AQ9UPZ6 1657 aa27.6■■■□□ 2.01
SHISA4-201ENST00000362011 BAG6P46379 1132 aa27.6■■■□□ 2.01
SHISA4-201ENST00000362011 COL18A1P39060 1754 aa27.59■■■□□ 2.01
SHISA4-201ENST00000362011 RTL1A6NKG5 1358 aa27.59■■■□□ 2.01
SHISA4-201ENST00000362011 FLT4P35916 1363 aa27.59■■■□□ 2.01
SHISA4-201ENST00000362011 WDR43Q15061 677 aaKnown RBP eCLIP27.58■■■□□ 2.01
SHISA4-201ENST00000362011 AMPHP49418 695 aa27.57■■■□□ 2
SHISA4-201ENST00000362011 DISP2A7MBM2 1401 aa27.57■■■□□ 2
SHISA4-201ENST00000362011 ABCC6O95255 1503 aa27.56■■■□□ 2
SHISA4-201ENST00000362011 RGPD1P0DJD0 1748 aa27.55■■■□□ 2
SHISA4-201ENST00000362011 DIAPH1O60610 1272 aaKnown RBP27.55■■■□□ 2
SHISA4-201ENST00000362011 RGPD2P0DJD1 1756 aa27.54■■■□□ 2
SHISA4-201ENST00000362011 A0A0G2JS52 829 aa27.54■■■□□ 2
SHISA4-201ENST00000362011 MYT1Q01538 1121 aa27.54■■■□□ 2
SHISA4-201ENST00000362011 NUDCQ9Y266 331 aa27.54■■■□□ 2
SHISA4-201ENST00000362011 ARHGEF25Q86VW2 580 aa27.53■■■□□ 2
SHISA4-201ENST00000362011 ZBTB7CA1YPR0 619 aa27.52■■■□□ 2
SHISA4-201ENST00000362011 HOXC9P31274 260 aa27.52■■■□□ 2
SHISA4-201ENST00000362011 PRDM11Q9NQV5 511 aa27.52■■■□□ 2
SHISA4-201ENST00000362011 FAM208AQ9UK61 1670 aaKnown RBP27.52■■■□□ 2
SHISA4-201ENST00000362011 SPATA31A1Q5TZJ5 1347 aa27.51■■□□□ 1.99
SHISA4-201ENST00000362011 ZC3H6P61129 1189 aaKnown RBP27.5■■□□□ 1.99
SHISA4-201ENST00000362011 IP6K1Q92551 441 aa27.5■■□□□ 1.99
SHISA4-201ENST00000362011 CPDO75976 1380 aa27.5■■□□□ 1.99
SHISA4-201ENST00000362011 EN1Q05925 392 aaPredicted RBP27.49■■□□□ 1.99
SHISA4-201ENST00000362011 HSP90AB2PQ58FF8 381 aa27.49■■□□□ 1.99
SHISA4-201ENST00000362011 KIAA0232Q92628 1395 aa27.49■■□□□ 1.99
SHISA4-201ENST00000362011 LMO7Q8WWI1 1683 aa27.49■■□□□ 1.99
SHISA4-201ENST00000362011 TNS1Q9HBL0 1735 aaKnown RBP27.49■■□□□ 1.99
SHISA4-201ENST00000362011 PSDA5PKW4 1024 aaPredicted RBP27.48■■□□□ 1.99
SHISA4-201ENST00000362011 FAM182BQ5T319 152 aa27.48■■□□□ 1.99
SHISA4-201ENST00000362011 IL13P35225 146 aa27.47■■□□□ 1.99
SHISA4-201ENST00000362011 YTHDC1Q96MU7 727 aaKnown RBP27.47■■□□□ 1.99
SHISA4-201ENST00000362011 ADAMTS8Q9UP79 889 aa27.47■■□□□ 1.99
SHISA4-201ENST00000362011 U2SURPO15042 1029 aaKnown RBP27.46■■□□□ 1.99
SHISA4-201ENST00000362011 EIF4A2Q14240 407 aaKnown RBP27.46■■□□□ 1.99
SHISA4-201ENST00000362011 CAMTA1Q9Y6Y1 1673 aa27.44■■□□□ 1.98
SHISA4-201ENST00000362011 U2AF1L5P0DN76 240 aaPredicted RBP27.43■■□□□ 1.98
SHISA4-201ENST00000362011 U2AF1Q01081 240 aaKnown RBP eCLIP27.43■■□□□ 1.98
SHISA4-201ENST00000362011 CHRNA2Q15822 529 aa27.42■■□□□ 1.98
SHISA4-201ENST00000362011 FAM196AQ6ZSG2 479 aa27.41■■□□□ 1.98
SHISA4-201ENST00000362011 BARGINQ6ZT62 677 aa27.41■■□□□ 1.98
SHISA4-201ENST00000362011 CAMKK2Q96RR4 588 aa27.41■■□□□ 1.98
SHISA4-201ENST00000362011 EZH2Q15910 746 aaKnown RBP27.39■■□□□ 1.97
SHISA4-201ENST00000362011 R3HDM1Q15032 1099 aaKnown RBP27.38■■□□□ 1.97
SHISA4-201ENST00000362011 LTV1Q96GA3 475 aaPredicted RBP27.38■■□□□ 1.97
SHISA4-201ENST00000362011 DLG5Q8TDM6 1919 aa27.37■■□□□ 1.97
SHISA4-201ENST00000362011 HNRNPUQ00839 825 aaKnown RBP eCLIP27.37■■□□□ 1.97
SHISA4-201ENST00000362011 STRN4Q9NRL3 753 aa27.37■■□□□ 1.97
SHISA4-201ENST00000362011 PNNQ9H307 717 aaKnown RBP27.36■■□□□ 1.97
SHISA4-201ENST00000362011 AXIN2Q9Y2T1 843 aa27.36■■□□□ 1.97
SHISA4-201ENST00000362011 TRIM37O94972 964 aa27.35■■□□□ 1.97
SHISA4-201ENST00000362011 CCDC146Q8IYE0 955 aa27.35■■□□□ 1.97
SHISA4-201ENST00000362011 ANKRD24Q8TF21 1146 aa27.35■■□□□ 1.97
SHISA4-201ENST00000362011 IGSF1Q8N6C5 1336 aa27.34■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms