RNA–Protein interactions for RNA: ENST00000361311.4

CLSTN1-201, Transcript of calsyntenin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLSTN1, Length 4,647 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-201ENST00000361311 SMARCA5O60264 1052 aaPredicted RBP19.07■□□□□ 0.64
CLSTN1-201ENST00000361311 PSMA5P28066 241 aa19.07■□□□□ 0.64
CLSTN1-201ENST00000361311 THUMPD2Q9BTF0 503 aaKnown RBP19.07■□□□□ 0.64
CLSTN1-201ENST00000361311 NOLC1Q14978 699 aaKnown RBP eCLIP19.07■□□□□ 0.641e-6■■□□□ 12
CLSTN1-201ENST00000361311 FCHSD2O94868 740 aa19.06■□□□□ 0.64
CLSTN1-201ENST00000361311 ABCC11Q96J66 1382 aa19.06■□□□□ 0.64
CLSTN1-201ENST00000361311 LARP1BQ659C4 914 aaKnown RBP19.06■□□□□ 0.64
CLSTN1-201ENST00000361311 CCDC9Q9Y3X0 531 aaKnown RBP19.05■□□□□ 0.64
CLSTN1-201ENST00000361311 MAP3K11Q16584 847 aa19.05■□□□□ 0.64
CLSTN1-201ENST00000361311 CCDC94Q9BW85 323 aaPredicted RBP19.05■□□□□ 0.64
CLSTN1-201ENST00000361311 NOL7Q9UMY1 257 aaKnown RBP19.05■□□□□ 0.64
CLSTN1-201ENST00000361311 TCOF1Q13428 1488 aaKnown RBP19.05■□□□□ 0.64
CLSTN1-201ENST00000361311 FILIP1Q7Z7B0 1213 aa19.05■□□□□ 0.64
CLSTN1-201ENST00000361311 FMNL2Q96PY5 1086 aa19.05■□□□□ 0.64
CLSTN1-201ENST00000361311 CYP46A1Q9Y6A2 500 aa19.05■□□□□ 0.64
CLSTN1-201ENST00000361311 SMC2O95347 1197 aa19.04■□□□□ 0.64
CLSTN1-201ENST00000361311 UVSSAQ2YD98 709 aa19.04■□□□□ 0.64
CLSTN1-201ENST00000361311 HSP90B2PQ58FF3 399 aa19.04■□□□□ 0.64
CLSTN1-201ENST00000361311 SMAP1Q8IYB5 467 aaPredicted RBP19.04■□□□□ 0.64
CLSTN1-201ENST00000361311 CLASRPQ8N2M8 674 aaKnown RBP19.04■□□□□ 0.64
CLSTN1-201ENST00000361311 NGDNQ8NEJ9 315 aaKnown RBP19.04■□□□□ 0.64
CLSTN1-201ENST00000361311 ZMYM4Q5VZL5 1548 aa19.04■□□□□ 0.64
CLSTN1-201ENST00000361311 HCLS1P14317 486 aaPredicted RBP19.03■□□□□ 0.64
CLSTN1-201ENST00000361311 SETQ01105 290 aaPredicted RBP19.03■□□□□ 0.64
CLSTN1-201ENST00000361311 C16orf45Q96MC5 204 aaPredicted RBP19.03■□□□□ 0.64
CLSTN1-201ENST00000361311 FSD2A1L4K1 749 aa19.03■□□□□ 0.64
CLSTN1-201ENST00000361311 IQGAP2Q13576 1575 aa19.03■□□□□ 0.64
CLSTN1-201ENST00000361311 EXOC6BQ9Y2D4 811 aa19.03■□□□□ 0.64
CLSTN1-201ENST00000361311 PRAG1Q86YV5 1406 aa19.02■□□□□ 0.64
CLSTN1-201ENST00000361311 CCT4P50991 539 aaKnown RBP19.02■□□□□ 0.64
CLSTN1-201ENST00000361311 G3BP1Q13283 466 aaKnown RBP eCLIP19.02■□□□□ 0.643e-6■■□□□ 12.9
CLSTN1-201ENST00000361311 TPM1P09493 284 aa19.02■□□□□ 0.64
CLSTN1-201ENST00000361311 CEBPZQ03701 1054 aaKnown RBP19.02■□□□□ 0.64
CLSTN1-201ENST00000361311 NFE2L2Q16236 605 aa19.02■□□□□ 0.64
CLSTN1-201ENST00000361311 SYNJ2O15056 1496 aa19.02■□□□□ 0.64
CLSTN1-201ENST00000361311 TNNT1P13805 278 aa19.02■□□□□ 0.64
CLSTN1-201ENST00000361311 TERF1P54274 439 aa19.02■□□□□ 0.64
CLSTN1-201ENST00000361311 SRCIN1Q9C0H9 1055 aa19.02■□□□□ 0.63
CLSTN1-201ENST00000361311 TTC12Q9H892 705 aaPredicted RBP19.02■□□□□ 0.63
CLSTN1-201ENST00000361311 EID1Q9Y6B2 187 aa19.02■□□□□ 0.63
CLSTN1-201ENST00000361311 THOC2Q8NI27 1593 aaKnown RBP19.02■□□□□ 0.63
CLSTN1-201ENST00000361311 RBM25P49756 843 aaKnown RBP19.01■□□□□ 0.63
CLSTN1-201ENST00000361311 CAMK4Q16566 473 aa19.01■□□□□ 0.63
CLSTN1-201ENST00000361311 RBSNQ9H1K0 784 aa19.01■□□□□ 0.63
CLSTN1-201ENST00000361311 ASXL1Q8IXJ9 1541 aa19.01■□□□□ 0.63
CLSTN1-201ENST00000361311 CPLX1O14810 134 aa19.01■□□□□ 0.63
CLSTN1-201ENST00000361311 SPATA32Q96LK8 384 aa19.01■□□□□ 0.63
CLSTN1-201ENST00000361311 SCAF11Q99590 1463 aaKnown RBP19.01■□□□□ 0.63
CLSTN1-201ENST00000361311 MAP4K4O95819 1239 aaPredicted RBP19.01■□□□□ 0.63
CLSTN1-201ENST00000361311 NOC3LQ8WTT2 800 aaKnown RBP19■□□□□ 0.63
CLSTN1-201ENST00000361311 PTPN14Q15678 1187 aa19■□□□□ 0.63
CLSTN1-201ENST00000361311 SNAPC4Q5SXM2 1469 aa19■□□□□ 0.63
CLSTN1-201ENST00000361311 TTC22Q5TAA0 569 aa19■□□□□ 0.63
CLSTN1-201ENST00000361311 BLMP54132 1417 aaPredicted RBP19■□□□□ 0.63
CLSTN1-201ENST00000361311 CCDC141Q6ZP82 1450 aa18.99■□□□□ 0.63
CLSTN1-201ENST00000361311 FERMT3Q86UX7 667 aa18.99■□□□□ 0.63
CLSTN1-201ENST00000361311 ARHGEF11O15085 1522 aa18.99■□□□□ 0.63
CLSTN1-201ENST00000361311 INSRP06213 1382 aa18.99■□□□□ 0.63
CLSTN1-201ENST00000361311 TEFQ10587 303 aa18.99■□□□□ 0.63
CLSTN1-201ENST00000361311 SYNE3Q6ZMZ3 975 aa18.99■□□□□ 0.63
CLSTN1-201ENST00000361311 TMX3Q96JJ7 454 aa18.99■□□□□ 0.63
CLSTN1-201ENST00000361311 IL1RAPL2Q9NP60 686 aa18.99■□□□□ 0.63
CLSTN1-201ENST00000361311 CCP110O43303 1012 aa18.98■□□□□ 0.63
CLSTN1-201ENST00000361311 GTPBP4Q9BZE4 634 aaKnown RBP18.98■□□□□ 0.63
CLSTN1-201ENST00000361311 ACBD3Q9H3P7 528 aa18.98■□□□□ 0.63
CLSTN1-201ENST00000361311 PES1O00541 588 aaKnown RBP18.98■□□□□ 0.63
CLSTN1-201ENST00000361311 ZSCAN31Q96LW9 406 aaPredicted RBP18.98■□□□□ 0.63
CLSTN1-201ENST00000361311 PIK3C2GO75747 1445 aa18.98■□□□□ 0.63
CLSTN1-201ENST00000361311 CPLX2Q6PUV4 134 aaKnown RBP18.98■□□□□ 0.63
CLSTN1-201ENST00000361311 CCDC30Q5VVM6 783 aa18.97■□□□□ 0.63
CLSTN1-201ENST00000361311 PDILTQ8N807 584 aa18.97■□□□□ 0.63
CLSTN1-201ENST00000361311 JAKMIP1Q96N16 626 aaKnown RBP18.97■□□□□ 0.63
CLSTN1-201ENST00000361311 FSD1Q9BTV5 496 aa18.97■□□□□ 0.63
CLSTN1-201ENST00000361311 PDRG1Q9NUG6 133 aa18.97■□□□□ 0.63
CLSTN1-201ENST00000361311 TSR1Q2NL82 804 aaKnown RBP18.97■□□□□ 0.63
CLSTN1-201ENST00000361311 AK7Q96M32 723 aa18.97■□□□□ 0.63
CLSTN1-201ENST00000361311 LEKR1Q6ZMV7 388 aa18.97■□□□□ 0.63
CLSTN1-201ENST00000361311 CALCOCO1Q9P1Z2 691 aa18.97■□□□□ 0.63
CLSTN1-201ENST00000361311 DMRT2Q9Y5R5 561 aa18.97■□□□□ 0.63
CLSTN1-201ENST00000361311 MX1P20591 662 aa18.96■□□□□ 0.63
CLSTN1-201ENST00000361311 GAS2L3Q86XJ1 694 aa18.96■□□□□ 0.63
CLSTN1-201ENST00000361311 CCDC83Q8IWF9 413 aa18.96■□□□□ 0.63
CLSTN1-201ENST00000361311 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP18.96■□□□□ 0.631e-7■■■■■ 27.2
CLSTN1-201ENST00000361311 STK3Q13188 491 aa18.96■□□□□ 0.63
CLSTN1-201ENST00000361311 CABP1Q9NZU7 370 aa18.96■□□□□ 0.63
CLSTN1-201ENST00000361311 CWC27Q6UX04 472 aaKnown RBP18.96■□□□□ 0.63
CLSTN1-201ENST00000361311 KIF18AQ8NI77 898 aa18.96■□□□□ 0.63
CLSTN1-201ENST00000361311 PRAM1Q96QH2 718 aa18.96■□□□□ 0.63
CLSTN1-201ENST00000361311 ZNF445P59923 1031 aa18.95■□□□□ 0.62
CLSTN1-201ENST00000361311 ZGPATQ8N5A5 531 aaKnown RBP18.95■□□□□ 0.62
CLSTN1-201ENST00000361311 BBXQ8WY36 941 aaPredicted RBP18.95■□□□□ 0.62
CLSTN1-201ENST00000361311 UBXN4Q92575 508 aa18.95■□□□□ 0.62
CLSTN1-201ENST00000361311 PPP6R1Q9UPN7 881 aa18.95■□□□□ 0.62
CLSTN1-201ENST00000361311 SULT6B1Q6IMI4 303 aa18.95■□□□□ 0.62
CLSTN1-201ENST00000361311 ANTXR1Q9H6X2 564 aa18.95■□□□□ 0.62
CLSTN1-201ENST00000361311 UHRF1BP1Q6BDS2 1440 aa18.95■□□□□ 0.62
CLSTN1-201ENST00000361311 KIAA0586Q9BVV6 1533 aa18.95■□□□□ 0.62
CLSTN1-201ENST00000361311 CASTP20810 708 aaKnown RBP18.95■□□□□ 0.62
CLSTN1-201ENST00000361311 ZBTB40Q9NUA8 1239 aa18.95■□□□□ 0.62
CLSTN1-201ENST00000361311 SDSP20132 328 aa18.94■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms