RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 SMARCA5O60264 1052 aaPredicted RBP19.73■□□□□ 0.75
SCAF1-201ENST00000360565 MBD3O95983 291 aa19.73■□□□□ 0.75
SCAF1-201ENST00000360565 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.73■□□□□ 0.75
SCAF1-201ENST00000360565 MAP4K4O95819 1239 aaPredicted RBP19.72■□□□□ 0.75
SCAF1-201ENST00000360565 CHMP4CQ96CF2 233 aa19.72■□□□□ 0.75
SCAF1-201ENST00000360565 CCDC34Q96HJ3 373 aa19.72■□□□□ 0.75
SCAF1-201ENST00000360565 SRGAP3O43295 1099 aa19.72■□□□□ 0.75
SCAF1-201ENST00000360565 ATF3P18847 181 aa19.72■□□□□ 0.75
SCAF1-201ENST00000360565 FOSBP53539 338 aa19.72■□□□□ 0.75
SCAF1-201ENST00000360565 CWC22Q9HCG8 908 aaKnown RBP19.72■□□□□ 0.75
SCAF1-201ENST00000360565 CPLX1O14810 134 aa19.71■□□□□ 0.75
SCAF1-201ENST00000360565 F6X3S4 739 aa19.71■□□□□ 0.75
SCAF1-201ENST00000360565 APPP05067 770 aa19.71■□□□□ 0.75
SCAF1-201ENST00000360565 FAM83GA6ND36 823 aa19.71■□□□□ 0.75
SCAF1-201ENST00000360565 GRPEL1Q9HAV7 217 aa19.71■□□□□ 0.75
SCAF1-201ENST00000360565 CPLX2Q6PUV4 134 aaKnown RBP19.7■□□□□ 0.74
SCAF1-201ENST00000360565 ADGRL2O95490 1459 aa19.7■□□□□ 0.74
SCAF1-201ENST00000360565 ABCA5Q8WWZ7 1642 aa19.7■□□□□ 0.74
SCAF1-201ENST00000360565 RLBP1P12271 317 aa19.7■□□□□ 0.74
SCAF1-201ENST00000360565 C8orf34Q49A92 452 aa19.7■□□□□ 0.74
SCAF1-201ENST00000360565 SPATA31E1Q6ZUB1 1445 aa19.7■□□□□ 0.74
SCAF1-201ENST00000360565 POLR3AO14802 1390 aaPredicted RBP19.7■□□□□ 0.74
SCAF1-201ENST00000360565 TBC1D32Q96NH3 1257 aa19.7■□□□□ 0.74
SCAF1-201ENST00000360565 A2MP01023 1474 aa19.69■□□□□ 0.74
SCAF1-201ENST00000360565 FIBPO43427 364 aa19.69■□□□□ 0.74
SCAF1-201ENST00000360565 COL17A1Q9UMD9 1497 aaPredicted RBP19.69■□□□□ 0.74
SCAF1-201ENST00000360565 DENND4BO75064 1496 aaPredicted RBP19.69■□□□□ 0.74
SCAF1-201ENST00000360565 KIF21AQ7Z4S6 1674 aa19.68■□□□□ 0.74
SCAF1-201ENST00000360565 SYTL4Q96C24 671 aaPredicted RBP19.68■□□□□ 0.74
SCAF1-201ENST00000360565 ANKRD36BQ8N2N9 1353 aa19.68■□□□□ 0.74
SCAF1-201ENST00000360565 MBIPQ9NS73 344 aa19.68■□□□□ 0.74
SCAF1-201ENST00000360565 PSMA5P28066 241 aa19.67■□□□□ 0.74
SCAF1-201ENST00000360565 SIL1Q9H173 461 aa19.67■□□□□ 0.74
SCAF1-201ENST00000360565 IL16Q14005 1332 aa19.67■□□□□ 0.74
SCAF1-201ENST00000360565 GNAT3A8MTJ3 354 aa19.67■□□□□ 0.74
SCAF1-201ENST00000360565 PROSER2Q86WR7 435 aaPredicted RBP19.67■□□□□ 0.74
SCAF1-201ENST00000360565 FAM13BQ9NYF5 915 aa19.67■□□□□ 0.74
SCAF1-201ENST00000360565 PIK3C2GO75747 1445 aa19.67■□□□□ 0.74
SCAF1-201ENST00000360565 RNF123Q5XPI4 1314 aa19.66■□□□□ 0.74
SCAF1-201ENST00000360565 PDZRN4Q6ZMN7 1036 aaPredicted RBP19.66■□□□□ 0.74
SCAF1-201ENST00000360565 CREBRFQ8IUR6 639 aa19.66■□□□□ 0.74
SCAF1-201ENST00000360565 TRDNQ13061 729 aa19.66■□□□□ 0.74
SCAF1-201ENST00000360565 DNAJC2Q99543 621 aaKnown RBP19.65■□□□□ 0.74
SCAF1-201ENST00000360565 WASHC4Q2M389 1173 aa19.65■□□□□ 0.74
SCAF1-201ENST00000360565 ERC1Q8IUD2 1116 aa19.65■□□□□ 0.74
SCAF1-201ENST00000360565 RASSF8Q8NHQ8 419 aa19.65■□□□□ 0.74
SCAF1-201ENST00000360565 BMP2KLQ5H9B9 411 aa19.65■□□□□ 0.74
SCAF1-201ENST00000360565 UPF3BQ9BZI7 483 aaKnown RBP19.65■□□□□ 0.74
SCAF1-201ENST00000360565 XPCQ01831 940 aaPredicted RBP19.65■□□□□ 0.74
SCAF1-201ENST00000360565 SASS6Q6UVJ0 657 aa19.64■□□□□ 0.73
SCAF1-201ENST00000360565 HDAC1Q13547 482 aaPredicted RBP19.64■□□□□ 0.73
SCAF1-201ENST00000360565 NUTM1Q86Y26 1132 aa19.64■□□□□ 0.73
SCAF1-201ENST00000360565 SYNE3Q6ZMZ3 975 aa19.64■□□□□ 0.73
SCAF1-201ENST00000360565 ASXL2Q76L83 1435 aa19.63■□□□□ 0.73
SCAF1-201ENST00000360565 TBC1D9Q6ZT07 1266 aa19.63■□□□□ 0.73
SCAF1-201ENST00000360565 EIF4G3O43432 1585 aaKnown RBP19.63■□□□□ 0.73
SCAF1-201ENST00000360565 CWC27Q6UX04 472 aaKnown RBP19.63■□□□□ 0.73
SCAF1-201ENST00000360565 FBXW7Q969H0 707 aa19.62■□□□□ 0.73
SCAF1-201ENST00000360565 BTBD11A6QL63 1104 aa19.62■□□□□ 0.73
SCAF1-201ENST00000360565 MX1P20591 662 aa19.62■□□□□ 0.73
SCAF1-201ENST00000360565 CCDC73Q6ZRK6 1079 aa19.62■□□□□ 0.73
SCAF1-201ENST00000360565 R3HCC1Q9Y3T6 440 aaKnown RBP19.62■□□□□ 0.73
SCAF1-201ENST00000360565 CYP46A1Q9Y6A2 500 aa19.62■□□□□ 0.73
SCAF1-201ENST00000360565 MYL6BP14649 208 aa19.62■□□□□ 0.73
SCAF1-201ENST00000360565 CCDC173Q0VFZ6 552 aa19.62■□□□□ 0.73
SCAF1-201ENST00000360565 PDCP20941 246 aa19.61■□□□□ 0.73
SCAF1-201ENST00000360565 RALYLQ86SE5 291 aaKnown RBP19.61■□□□□ 0.73
SCAF1-201ENST00000360565 USHBP1Q8N6Y0 703 aa19.61■□□□□ 0.73
SCAF1-201ENST00000360565 ZNF592Q92610 1267 aa19.61■□□□□ 0.73
SCAF1-201ENST00000360565 WDR33Q9C0J8 1336 aaKnown RBP19.61■□□□□ 0.73
SCAF1-201ENST00000360565 HIP1O00291 1037 aa19.61■□□□□ 0.73
SCAF1-201ENST00000360565 TATP17735 454 aaPredicted RBP19.61■□□□□ 0.73
SCAF1-201ENST00000360565 AKAP17AQ02040 695 aaKnown RBP19.61■□□□□ 0.73
SCAF1-201ENST00000360565 AMOTL2Q9Y2J4 779 aa19.61■□□□□ 0.73
SCAF1-201ENST00000360565 DMRT2Q9Y5R5 561 aa19.61■□□□□ 0.73
SCAF1-201ENST00000360565 TSPY26PQ9H489 355 aa19.61■□□□□ 0.73
SCAF1-201ENST00000360565 ANO8Q9HCE9 1232 aaPredicted RBP19.61■□□□□ 0.73
SCAF1-201ENST00000360565 CEBPAP49715 358 aaPredicted RBP19.6■□□□□ 0.73
SCAF1-201ENST00000360565 AACSQ86V21 672 aa19.6■□□□□ 0.73
SCAF1-201ENST00000360565 EIF2AK4Q9P2K8 1649 aaKnown RBP19.6■□□□□ 0.73
SCAF1-201ENST00000360565 TRIM29Q14134 588 aa19.6■□□□□ 0.73
SCAF1-201ENST00000360565 TAF7Q15545 349 aaPredicted RBP19.6■□□□□ 0.73
SCAF1-201ENST00000360565 TNPO1Q92973 898 aaKnown RBP19.6■□□□□ 0.73
SCAF1-201ENST00000360565 CCDC39Q9UFE4 941 aa19.6■□□□□ 0.73
SCAF1-201ENST00000360565 POLKQ9UBT6 870 aa19.59■□□□□ 0.73
SCAF1-201ENST00000360565 ANKLE2Q86XL3 938 aa19.59■□□□□ 0.73
SCAF1-201ENST00000360565 MPNDQ8N594 471 aa19.59■□□□□ 0.73
SCAF1-201ENST00000360565 KDM6BO15054 1643 aa19.59■□□□□ 0.73
SCAF1-201ENST00000360565 SSFA2P28290 1259 aa19.59■□□□□ 0.73
SCAF1-201ENST00000360565 NUCB1Q02818 461 aa19.58■□□□□ 0.73
SCAF1-201ENST00000360565 ESPNB1AK53 854 aa19.58■□□□□ 0.73
SCAF1-201ENST00000360565 SEC24BO95487 1268 aa19.58■□□□□ 0.73
SCAF1-201ENST00000360565 HSP90AB2PQ58FF8 381 aa19.58■□□□□ 0.73
SCAF1-201ENST00000360565 ZRANB1Q9UGI0 708 aa19.58■□□□□ 0.72
SCAF1-201ENST00000360565 ZC3H6P61129 1189 aaKnown RBP19.57■□□□□ 0.72
SCAF1-201ENST00000360565 NFXL1Q6ZNB6 911 aa19.57■□□□□ 0.72
SCAF1-201ENST00000360565 VSIG10Q8N0Z9 540 aa19.57■□□□□ 0.72
SCAF1-201ENST00000360565 FLIIQ13045 1269 aa19.57■□□□□ 0.72
SCAF1-201ENST00000360565 STK3Q13188 491 aa19.57■□□□□ 0.72
SCAF1-201ENST00000360565 ARHGAP45Q92619 1136 aa19.57■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms