RNA–Protein interactions for RNA: ENST00000359082.3

SHANK1-202, Transcript of SH3 and multiple ankyrin repeat domains 1, humanhuman

TSL 5 BASIC

Gene SHANK1, Length 6,459 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK1-202ENST00000359082 SEPT7Q16181 437 aaKnown RBP21.79■■□□□ 1.08
SHANK1-202ENST00000359082 CABP4P57796 275 aa21.78■■□□□ 1.08
SHANK1-202ENST00000359082 GOLGA6L10A6NI86 522 aa21.78■■□□□ 1.08
SHANK1-202ENST00000359082 LRRCC1Q9C099 1032 aa21.78■■□□□ 1.08
SHANK1-202ENST00000359082 RBM5P52756 815 aaKnown RBP eCLIP21.78■■□□□ 1.08
SHANK1-202ENST00000359082 ENOX2Q16206 610 aaKnown RBP21.78■■□□□ 1.08
SHANK1-202ENST00000359082 SEPT11Q9NVA2 429 aaKnown RBP21.78■■□□□ 1.08
SHANK1-202ENST00000359082 DACH1Q9UI36 760 aa21.77■■□□□ 1.08
SHANK1-202ENST00000359082 AEBP1Q8IUX7 1158 aa21.77■■□□□ 1.08
SHANK1-202ENST00000359082 GRIN2BQ13224 1484 aa21.77■■□□□ 1.08
SHANK1-202ENST00000359082 BRPF3Q9ULD4 1205 aa21.77■■□□□ 1.08
SHANK1-202ENST00000359082 BCAR3O75815 825 aa21.77■■□□□ 1.08
SHANK1-202ENST00000359082 CCDC192P0DO97 292 aa21.77■■□□□ 1.08
SHANK1-202ENST00000359082 TATP17735 454 aaPredicted RBP21.77■■□□□ 1.08
SHANK1-202ENST00000359082 TRIM22Q8IYM9 498 aa21.76■■□□□ 1.07
SHANK1-202ENST00000359082 STIM1Q13586 685 aa21.76■■□□□ 1.07
SHANK1-202ENST00000359082 JMYQ8N9B5 988 aa21.76■■□□□ 1.07
SHANK1-202ENST00000359082 ARHGAP5Q13017 1502 aa21.76■■□□□ 1.07
SHANK1-202ENST00000359082 ZRSR2Q15696 482 aaKnown RBP21.75■■□□□ 1.07
SHANK1-202ENST00000359082 AQRO60306 1485 aaKnown RBP eCLIP21.75■■□□□ 1.07
SHANK1-202ENST00000359082 FGD6Q6ZV73 1430 aa21.75■■□□□ 1.07
SHANK1-202ENST00000359082 CCDC66A2RUB6 948 aa21.75■■□□□ 1.07
SHANK1-202ENST00000359082 FAM193AP78312 1265 aa21.75■■□□□ 1.07
SHANK1-202ENST00000359082 HDGFL1Q5TGJ6 251 aa21.75■■□□□ 1.07
SHANK1-202ENST00000359082 NACAP1Q9BZK3 213 aa21.75■■□□□ 1.07
SHANK1-202ENST00000359082 SPINK5Q9NQ38 1064 aaPredicted RBP21.75■■□□□ 1.07
SHANK1-202ENST00000359082 SOGA3Q5TF21 947 aa21.75■■□□□ 1.07
SHANK1-202ENST00000359082 CENPHQ9H3R5 247 aa21.75■■□□□ 1.07
SHANK1-202ENST00000359082 ANKRD1Q15327 319 aa21.74■■□□□ 1.07
SHANK1-202ENST00000359082 DDX54Q8TDD1 881 aaKnown RBP21.74■■□□□ 1.07
SHANK1-202ENST00000359082 FKBP4Q02790 459 aaKnown RBP eCLIP21.74■■□□□ 1.07
SHANK1-202ENST00000359082 PRAM1Q96QH2 718 aa21.74■■□□□ 1.07
SHANK1-202ENST00000359082 CFAP70Q5T0N1 1121 aa21.74■■□□□ 1.07
SHANK1-202ENST00000359082 HSP90AB3PQ58FF7 597 aa21.73■■□□□ 1.07
SHANK1-202ENST00000359082 FYCO1Q9BQS8 1478 aa21.73■■□□□ 1.07
SHANK1-202ENST00000359082 RRBP1Q9P2E9 1410 aaKnown RBP21.73■■□□□ 1.07
SHANK1-202ENST00000359082 MATR3P43243 847 aaKnown RBP eCLIP21.72■■□□□ 1.07
SHANK1-202ENST00000359082 PIBF1Q8WXW3 757 aa21.72■■□□□ 1.07
SHANK1-202ENST00000359082 CCT4P50991 539 aaKnown RBP21.72■■□□□ 1.07
SHANK1-202ENST00000359082 K7ELQ4 463 aaPredicted RBP21.72■■□□□ 1.07
SHANK1-202ENST00000359082 AACSQ86V21 672 aa21.72■■□□□ 1.07
SHANK1-202ENST00000359082 TAX1BP1Q86VP1 789 aa21.72■■□□□ 1.07
SHANK1-202ENST00000359082 SULT6B1Q6IMI4 303 aa21.71■■□□□ 1.07
SHANK1-202ENST00000359082 LARP1BQ659C4 914 aaKnown RBP21.71■■□□□ 1.07
SHANK1-202ENST00000359082 TXNDC2Q86VQ3 553 aa21.71■■□□□ 1.07
SHANK1-202ENST00000359082 PKNOX2Q96KN3 472 aa21.71■■□□□ 1.07
SHANK1-202ENST00000359082 ANKRD18AQ8IVF6 992 aa21.71■■□□□ 1.07
SHANK1-202ENST00000359082 DCAF8L1A6NGE4 600 aa21.71■■□□□ 1.07
SHANK1-202ENST00000359082 NUTM2BA6NNL0 878 aaPredicted RBP21.71■■□□□ 1.07
SHANK1-202ENST00000359082 NUTM2EB1AL46 878 aaPredicted RBP21.71■■□□□ 1.07
SHANK1-202ENST00000359082 SSBP05455 408 aaKnown RBP eCLIP21.71■■□□□ 1.07
SHANK1-202ENST00000359082 NUTM2AQ8IVF1 878 aaPredicted RBP21.71■■□□□ 1.07
SHANK1-202ENST00000359082 ANKRD50Q9ULJ7 1429 aa21.7■■□□□ 1.07
SHANK1-202ENST00000359082 LUC7LQ9NQ29 371 aaKnown RBP21.7■■□□□ 1.06
SHANK1-202ENST00000359082 NOL7Q9UMY1 257 aaKnown RBP21.7■■□□□ 1.06
SHANK1-202ENST00000359082 PDRG1Q9NUG6 133 aa21.7■■□□□ 1.06
SHANK1-202ENST00000359082 WDR33Q9C0J8 1336 aaKnown RBP21.7■■□□□ 1.06
SHANK1-202ENST00000359082 SYNJ2O15056 1496 aa21.7■■□□□ 1.06
SHANK1-202ENST00000359082 CBFA2T2O43439 604 aa21.69■■□□□ 1.06
SHANK1-202ENST00000359082 TOM1L2Q6ZVM7 507 aa21.69■■□□□ 1.06
SHANK1-202ENST00000359082 PROSER2Q86WR7 435 aaPredicted RBP21.69■■□□□ 1.06
SHANK1-202ENST00000359082 CCDC57Q2TAC2 916 aa21.69■■□□□ 1.06
SHANK1-202ENST00000359082 MPHOSPH8Q99549 860 aa21.69■■□□□ 1.06
SHANK1-202ENST00000359082 KIAA0754O94854 1291 aa21.69■■□□□ 1.06
SHANK1-202ENST00000359082 KRT85P78386 507 aa21.68■■□□□ 1.06
SHANK1-202ENST00000359082 SPATA32Q96LK8 384 aa21.68■■□□□ 1.06
SHANK1-202ENST00000359082 CDK19Q9BWU1 502 aa21.68■■□□□ 1.06
SHANK1-202ENST00000359082 CWC27Q6UX04 472 aaKnown RBP21.68■■□□□ 1.06
SHANK1-202ENST00000359082 SRCIN1Q9C0H9 1055 aa21.68■■□□□ 1.06
SHANK1-202ENST00000359082 ZSCAN25Q6NSZ9 544 aa21.68■■□□□ 1.06
SHANK1-202ENST00000359082 CCDC112Q8NEF3 446 aa21.68■■□□□ 1.06
SHANK1-202ENST00000359082 TDO2P48775 406 aa21.67■■□□□ 1.06
SHANK1-202ENST00000359082 CASKIN1Q8WXD9 1431 aa21.67■■□□□ 1.06
SHANK1-202ENST00000359082 MPHOSPH10O00566 681 aaKnown RBP21.67■■□□□ 1.06
SHANK1-202ENST00000359082 HMGN5P82970 282 aaKnown RBP21.67■■□□□ 1.06
SHANK1-202ENST00000359082 JAKMIP1Q96N16 626 aaKnown RBP21.67■■□□□ 1.06
SHANK1-202ENST00000359082 ZSCAN29Q8IWY8 852 aaPredicted RBP21.66■■□□□ 1.06
SHANK1-202ENST00000359082 TXLNBQ8N3L3 684 aa21.66■■□□□ 1.06
SHANK1-202ENST00000359082 AKNAQ7Z591 1439 aa21.66■■□□□ 1.06
SHANK1-202ENST00000359082 IBSPP21815 317 aaPredicted RBP21.66■■□□□ 1.06
SHANK1-202ENST00000359082 ZNF530Q6P9A1 599 aaPredicted RBP21.66■■□□□ 1.06
SHANK1-202ENST00000359082 MRC2Q9UBG0 1479 aa21.65■■□□□ 1.06
SHANK1-202ENST00000359082 SPG7Q9UQ90 795 aa21.65■■□□□ 1.06
SHANK1-202ENST00000359082 ZNF76P36508 570 aa21.65■■□□□ 1.06
SHANK1-202ENST00000359082 CHD1LQ86WJ1 897 aa21.65■■□□□ 1.06
SHANK1-202ENST00000359082 GRPEL1Q9HAV7 217 aa21.64■■□□□ 1.06
SHANK1-202ENST00000359082 RAI14Q9P0K7 980 aa21.64■■□□□ 1.06
SHANK1-202ENST00000359082 UQCRHLA0A096LP55 91 aa21.64■■□□□ 1.05
SHANK1-202ENST00000359082 UQCRHP07919 91 aa21.64■■□□□ 1.05
SHANK1-202ENST00000359082 CEP57L1Q8IYX8 460 aa21.64■■□□□ 1.05
SHANK1-202ENST00000359082 PDE3AQ14432 1141 aa21.64■■□□□ 1.05
SHANK1-202ENST00000359082 UBAC1Q9BSL1 405 aa21.64■■□□□ 1.05
SHANK1-202ENST00000359082 BLOC1S2Q6QNY1 142 aa21.63■■□□□ 1.05
SHANK1-202ENST00000359082 LRRC9Q6ZRR7 1453 aa21.63■■□□□ 1.05
SHANK1-202ENST00000359082 ERLIN1O75477 346 aa21.63■■□□□ 1.05
SHANK1-202ENST00000359082 CDKL5O76039 1030 aa21.63■■□□□ 1.05
SHANK1-202ENST00000359082 USP5P45974 858 aa21.63■■□□□ 1.05
SHANK1-202ENST00000359082 BICDL1Q6ZP65 573 aa21.63■■□□□ 1.05
SHANK1-202ENST00000359082 BTBD11A6QL63 1104 aa21.63■■□□□ 1.05
SHANK1-202ENST00000359082 PNISRQ8TF01 805 aaKnown RBP21.63■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms