RNA–Protein interactions for RNA: ENST00000358389.7

CNOT3-202, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 4,118 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-202ENST00000358389 PLB1Q6P1J6 1458 aa13.84□□□□□ -0.19
CNOT3-202ENST00000358389 NSD3Q9BZ95 1437 aa13.84□□□□□ -0.19
CNOT3-202ENST00000358389 RSPH4AQ5TD94 716 aa13.83□□□□□ -0.2
CNOT3-202ENST00000358389 GOLGA6L6A8MZA4 724 aa13.83□□□□□ -0.2
CNOT3-202ENST00000358389 CLASP1Q7Z460 1538 aa13.83□□□□□ -0.2
CNOT3-202ENST00000358389 CEP170Q5SW79 1584 aa13.82□□□□□ -0.2
CNOT3-202ENST00000358389 TRPM1Q7Z4N2 1603 aa13.82□□□□□ -0.2
CNOT3-202ENST00000358389 USP26Q9BXU7 913 aa13.82□□□□□ -0.2
CNOT3-202ENST00000358389 GADD45BO75293 160 aaPredicted RBP13.82□□□□□ -0.2
CNOT3-202ENST00000358389 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.82□□□□□ -0.21e-6■■■■□ 26.5
CNOT3-202ENST00000358389 SMARCA5O60264 1052 aaPredicted RBP13.82□□□□□ -0.2
CNOT3-202ENST00000358389 CCDC27Q2M243 656 aa13.82□□□□□ -0.2
CNOT3-202ENST00000358389 C16orf45Q96MC5 204 aaPredicted RBP13.82□□□□□ -0.2
CNOT3-202ENST00000358389 ZDHHC9Q9Y397 364 aa13.82□□□□□ -0.2
CNOT3-202ENST00000358389 NPHP1O15259 732 aa13.81□□□□□ -0.2
CNOT3-202ENST00000358389 PRDM15P57071 1507 aaPredicted RBP13.81□□□□□ -0.2
CNOT3-202ENST00000358389 SCAPERQ9BY12 1400 aa13.81□□□□□ -0.2
CNOT3-202ENST00000358389 FAM184AQ8NB25 1140 aa13.81□□□□□ -0.2
CNOT3-202ENST00000358389 URB2Q14146 1524 aaKnown RBP13.81□□□□□ -0.2
CNOT3-202ENST00000358389 NPC1L1Q9UHC9 1359 aa13.81□□□□□ -0.2
CNOT3-202ENST00000358389 CCDC66A2RUB6 948 aa13.81□□□□□ -0.2
CNOT3-202ENST00000358389 FIBPO43427 364 aa13.81□□□□□ -0.2
CNOT3-202ENST00000358389 TMX3Q96JJ7 454 aa13.81□□□□□ -0.2
CNOT3-202ENST00000358389 GSPT1P15170 499 aaKnown RBP13.8□□□□□ -0.2
CNOT3-202ENST00000358389 MCCP23508 829 aa13.8□□□□□ -0.2
CNOT3-202ENST00000358389 TMEM51Q9NW97 253 aa13.8□□□□□ -0.2
CNOT3-202ENST00000358389 SCAF11Q99590 1463 aaKnown RBP13.8□□□□□ -0.2
CNOT3-202ENST00000358389 HDGFL2Q7Z4V5 671 aaPredicted RBP13.79□□□□□ -0.2
CNOT3-202ENST00000358389 USP48Q86UV5 1035 aa13.79□□□□□ -0.2
CNOT3-202ENST00000358389 OTUD7AQ8TE49 926 aaPredicted RBP13.79□□□□□ -0.2
CNOT3-202ENST00000358389 THUMPD2Q9BTF0 503 aaKnown RBP13.79□□□□□ -0.2
CNOT3-202ENST00000358389 UPF3BQ9BZI7 483 aaKnown RBP13.79□□□□□ -0.2
CNOT3-202ENST00000358389 GGNBP2Q9H3C7 697 aa13.79□□□□□ -0.2
CNOT3-202ENST00000358389 ANO2Q9NQ90 1003 aa13.79□□□□□ -0.2
CNOT3-202ENST00000358389 CYP2E1P05181 493 aaPredicted RBP13.79□□□□□ -0.2
CNOT3-202ENST00000358389 FKBP5Q13451 457 aaPredicted RBP13.79□□□□□ -0.2
CNOT3-202ENST00000358389 EIF4G3O43432 1585 aaKnown RBP13.78□□□□□ -0.2
CNOT3-202ENST00000358389 TRIM6-TRIM34B2RNG4 842 aa13.78□□□□□ -0.2
CNOT3-202ENST00000358389 TNNT3P45378 269 aaPredicted RBP13.78□□□□□ -0.2
CNOT3-202ENST00000358389 PLEKHM2Q8IWE5 1019 aa13.78□□□□□ -0.2
CNOT3-202ENST00000358389 OGFRQ9NZT2 677 aa13.78□□□□□ -0.2
CNOT3-202ENST00000358389 PLA2R1Q13018 1463 aa13.78□□□□□ -0.2
CNOT3-202ENST00000358389 ADGBQ8N7X0 1667 aa13.78□□□□□ -0.2
CNOT3-202ENST00000358389 TTC22Q5TAA0 569 aa13.78□□□□□ -0.2
CNOT3-202ENST00000358389 GIMAP6Q6P9H5 292 aa13.78□□□□□ -0.2
CNOT3-202ENST00000358389 PYCARDQ9ULZ3 195 aa13.78□□□□□ -0.2
CNOT3-202ENST00000358389 SDSP20132 328 aa13.78□□□□□ -0.2
CNOT3-202ENST00000358389 RILPL2Q969X0 211 aa13.78□□□□□ -0.2
CNOT3-202ENST00000358389 SLC4A10Q6U841 1118 aa13.77□□□□□ -0.2
CNOT3-202ENST00000358389 AEBP1Q8IUX7 1158 aa13.77□□□□□ -0.2
CNOT3-202ENST00000358389 ERC2O15083 957 aa13.77□□□□□ -0.21
CNOT3-202ENST00000358389 ZBTB7BO15156 539 aaPredicted RBP13.77□□□□□ -0.21
CNOT3-202ENST00000358389 NUP160Q12769 1436 aa13.77□□□□□ -0.21
CNOT3-202ENST00000358389 CCDC112Q8NEF3 446 aa13.77□□□□□ -0.21
CNOT3-202ENST00000358389 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.77□□□□□ -0.21
CNOT3-202ENST00000358389 V9GYY5 206 aaPredicted RBP13.77□□□□□ -0.21
CNOT3-202ENST00000358389 UVSSAQ2YD98 709 aa13.76□□□□□ -0.21
CNOT3-202ENST00000358389 CCDC183Q5T5S1 534 aa13.76□□□□□ -0.21
CNOT3-202ENST00000358389 FEZ1Q99689 392 aa13.76□□□□□ -0.21
CNOT3-202ENST00000358389 TMEM132EQ6IEE7 984 aa13.76□□□□□ -0.21
CNOT3-202ENST00000358389 CCDC141Q6ZP82 1450 aa13.76□□□□□ -0.21
CNOT3-202ENST00000358389 TPD52L1Q16890 204 aaPredicted RBP13.76□□□□□ -0.21
CNOT3-202ENST00000358389 IPO4Q8TEX9 1081 aaKnown RBP13.76□□□□□ -0.21
CNOT3-202ENST00000358389 ATAD2Q6PL18 1390 aa13.76□□□□□ -0.21
CNOT3-202ENST00000358389 PHF23Q9BUL5 403 aaPredicted RBP13.75□□□□□ -0.21
CNOT3-202ENST00000358389 NAA30Q147X3 362 aaPredicted RBP13.75□□□□□ -0.21
CNOT3-202ENST00000358389 RTF1Q92541 710 aaKnown RBP13.75□□□□□ -0.21
CNOT3-202ENST00000358389 LARP6Q9BRS8 491 aaKnown RBP13.75□□□□□ -0.21
CNOT3-202ENST00000358389 KDM4AO75164 1064 aa13.75□□□□□ -0.21
CNOT3-202ENST00000358389 TNNT1P13805 278 aa13.75□□□□□ -0.21
CNOT3-202ENST00000358389 TIGD1Q96MW7 591 aa13.75□□□□□ -0.21
CNOT3-202ENST00000358389 DTNBO60941 627 aa13.75□□□□□ -0.21
CNOT3-202ENST00000358389 TRIM35Q9UPQ4 493 aa13.75□□□□□ -0.21
CNOT3-202ENST00000358389 GTF2F1P35269 517 aaKnown RBP eCLIP13.74□□□□□ -0.21
CNOT3-202ENST00000358389 CNPY2Q9Y2B0 182 aa13.74□□□□□ -0.21
CNOT3-202ENST00000358389 PTGS1P23219 599 aa13.74□□□□□ -0.21
CNOT3-202ENST00000358389 TSHZ3Q63HK5 1081 aa13.74□□□□□ -0.21
CNOT3-202ENST00000358389 PPIP5K1Q6PFW1 1433 aa13.73□□□□□ -0.21
CNOT3-202ENST00000358389 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.73□□□□□ -0.21
CNOT3-202ENST00000358389 DNAJC5BQ9UF47 199 aa13.73□□□□□ -0.21
CNOT3-202ENST00000358389 RAPGEF6Q8TEU7 1601 aa13.73□□□□□ -0.21
CNOT3-202ENST00000358389 HMOX1P09601 288 aa13.73□□□□□ -0.21
CNOT3-202ENST00000358389 ZRSR1Q15695 479 aaKnown RBP13.73□□□□□ -0.21
CNOT3-202ENST00000358389 SIRT2Q8IXJ6 389 aa13.73□□□□□ -0.21
CNOT3-202ENST00000358389 WDR33Q9C0J8 1336 aaKnown RBP13.73□□□□□ -0.21
CNOT3-202ENST00000358389 TRIM5Q9C035 493 aa13.73□□□□□ -0.21
CNOT3-202ENST00000358389 ITSN2Q9NZM3 1697 aa13.72□□□□□ -0.21
CNOT3-202ENST00000358389 GOLGA6L4A6NEF3 574 aa13.72□□□□□ -0.21
CNOT3-202ENST00000358389 BRD1O95696 1058 aa13.72□□□□□ -0.21
CNOT3-202ENST00000358389 PAXIP1Q6ZW49 1069 aaPredicted RBP13.72□□□□□ -0.21
CNOT3-202ENST00000358389 ADGRF5Q8IZF2 1346 aa13.72□□□□□ -0.21
CNOT3-202ENST00000358389 EIF2AK4Q9P2K8 1649 aaKnown RBP13.72□□□□□ -0.21
CNOT3-202ENST00000358389 TPM3P06753 285 aa13.72□□□□□ -0.21
CNOT3-202ENST00000358389 ALDH1L2Q3SY69 923 aa13.72□□□□□ -0.21
CNOT3-202ENST00000358389 TSPYL6Q8N831 410 aa13.72□□□□□ -0.21
CNOT3-202ENST00000358389 DIAPH1O60610 1272 aaKnown RBP13.71□□□□□ -0.21
CNOT3-202ENST00000358389 CCDC186Q7Z3E2 898 aa13.71□□□□□ -0.21
CNOT3-202ENST00000358389 CERS3Q8IU89 383 aa13.71□□□□□ -0.21
CNOT3-202ENST00000358389 KIAA1524Q8TCG1 905 aa13.71□□□□□ -0.21
CNOT3-202ENST00000358389 CABP2Q9NPB3 220 aa13.71□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 50 ms