RNA–Protein interactions for RNA: ENST00000356183.8

GTF3C1-201, Transcript of general transcription factor IIIC subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GTF3C1, Length 7,018 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-201ENST00000356183 AEBP2Q6ZN18 517 aaPredicted RBP13.03□□□□□ -0.32
GTF3C1-201ENST00000356183 ZSCAN30Q86W11 494 aa13.03□□□□□ -0.32
GTF3C1-201ENST00000356183 BCCIPQ9P287 314 aaKnown RBP eCLIP13.03□□□□□ -0.32
GTF3C1-201ENST00000356183 CDCA7LQ96GN5 454 aa13.03□□□□□ -0.32
GTF3C1-201ENST00000356183 EFCAB2Q5VUJ9 269 aa13.03□□□□□ -0.32
GTF3C1-201ENST00000356183 PHF23Q9BUL5 403 aaPredicted RBP13.03□□□□□ -0.32
GTF3C1-201ENST00000356183 LUC7LQ9NQ29 371 aaKnown RBP13.03□□□□□ -0.32
GTF3C1-201ENST00000356183 WASHC2CQ9Y4E1 1318 aa13.03□□□□□ -0.32
GTF3C1-201ENST00000356183 K7ELQ4 463 aaPredicted RBP13.03□□□□□ -0.32
GTF3C1-201ENST00000356183 CCDC148Q8NFR7 591 aa13.03□□□□□ -0.32
GTF3C1-201ENST00000356183 ZNF428Q96B54 188 aa13.02□□□□□ -0.32
GTF3C1-201ENST00000356183 CCDC144AA2RUR9 1427 aa13.02□□□□□ -0.32
GTF3C1-201ENST00000356183 CEP63Q96MT8 703 aa13.02□□□□□ -0.32
GTF3C1-201ENST00000356183 RRBP1Q9P2E9 1410 aaKnown RBP13.02□□□□□ -0.32
GTF3C1-201ENST00000356183 STIM1Q13586 685 aa13.02□□□□□ -0.33
GTF3C1-201ENST00000356183 FILIP1Q7Z7B0 1213 aa13.02□□□□□ -0.33
GTF3C1-201ENST00000356183 CAMK4Q16566 473 aa13.02□□□□□ -0.33
GTF3C1-201ENST00000356183 MCM2P49736 904 aa13.02□□□□□ -0.33
GTF3C1-201ENST00000356183 PDCP20941 246 aa13.01□□□□□ -0.33
GTF3C1-201ENST00000356183 GOPCQ9HD26 462 aa13.01□□□□□ -0.33
GTF3C1-201ENST00000356183 CCDC91Q7Z6B0 441 aa13.01□□□□□ -0.33
GTF3C1-201ENST00000356183 TXLNBQ8N3L3 684 aa13.01□□□□□ -0.33
GTF3C1-201ENST00000356183 SPDYE4A6NLX3 237 aa13□□□□□ -0.33
GTF3C1-201ENST00000356183 UBXN4Q92575 508 aa13□□□□□ -0.33
GTF3C1-201ENST00000356183 GNAI1P63096 354 aa13□□□□□ -0.33
GTF3C1-201ENST00000356183 TTC39AQ5SRH9 613 aa13□□□□□ -0.33
GTF3C1-201ENST00000356183 CRACR2AQ9BSW2 395 aa13□□□□□ -0.33
GTF3C1-201ENST00000356183 SSR1P43307 286 aaKnown RBP13□□□□□ -0.33
GTF3C1-201ENST00000356183 SYCE3A1L190 88 aa13□□□□□ -0.33
GTF3C1-201ENST00000356183 EPB41L2O43491 1005 aaKnown RBP13□□□□□ -0.33
GTF3C1-201ENST00000356183 DHX8Q14562 1220 aaKnown RBP13□□□□□ -0.33
GTF3C1-201ENST00000356183 DDX11Q96FC9 970 aa13□□□□□ -0.33
GTF3C1-201ENST00000356183 SPATA32Q96LK8 384 aa12.99□□□□□ -0.33
GTF3C1-201ENST00000356183 WDR33Q9C0J8 1336 aaKnown RBP12.99□□□□□ -0.33
GTF3C1-201ENST00000356183 SURF6O75683 361 aaKnown RBP12.99□□□□□ -0.33
GTF3C1-201ENST00000356183 CYP46A1Q9Y6A2 500 aa12.99□□□□□ -0.33
GTF3C1-201ENST00000356183 GTF2F1P35269 517 aaKnown RBP eCLIP12.99□□□□□ -0.33
GTF3C1-201ENST00000356183 JAKMIP3Q5VZ66 844 aa12.99□□□□□ -0.33
GTF3C1-201ENST00000356183 NUP62CLQ9H1M0 184 aa12.99□□□□□ -0.33
GTF3C1-201ENST00000356183 TBC1D2BQ9UPU7 963 aa12.99□□□□□ -0.33
GTF3C1-201ENST00000356183 CCDC97Q96F63 343 aaPredicted RBP12.98□□□□□ -0.33
GTF3C1-201ENST00000356183 CIZ1Q9ULV3 898 aaPredicted RBP12.98□□□□□ -0.33
GTF3C1-201ENST00000356183 TAF4BQ92750 862 aa12.98□□□□□ -0.33
GTF3C1-201ENST00000356183 UPF3BQ9BZI7 483 aaKnown RBP12.98□□□□□ -0.33
GTF3C1-201ENST00000356183 CCDC69A6NI79 296 aa12.98□□□□□ -0.33
GTF3C1-201ENST00000356183 FAM177BA6PVY3 158 aa12.98□□□□□ -0.33
GTF3C1-201ENST00000356183 KRT85P78386 507 aa12.98□□□□□ -0.33
GTF3C1-201ENST00000356183 JPH4Q96JJ6 628 aa12.98□□□□□ -0.33
GTF3C1-201ENST00000356183 ATP2B2Q01814 1243 aa12.98□□□□□ -0.33
GTF3C1-201ENST00000356183 PPP4R3BQ5MIZ7 849 aa12.98□□□□□ -0.33
GTF3C1-201ENST00000356183 LARP1BQ659C4 914 aaKnown RBP12.98□□□□□ -0.33
GTF3C1-201ENST00000356183 PDE3AQ14432 1141 aa12.98□□□□□ -0.33
GTF3C1-201ENST00000356183 SRRTQ9BXP5 876 aaKnown RBP12.98□□□□□ -0.33
GTF3C1-201ENST00000356183 CALCOCO1Q9P1Z2 691 aa12.98□□□□□ -0.33
GTF3C1-201ENST00000356183 UBE4AQ14139 1066 aa12.98□□□□□ -0.33
GTF3C1-201ENST00000356183 NOB1Q9ULX3 412 aaKnown RBP12.98□□□□□ -0.33
GTF3C1-201ENST00000356183 JMYQ8N9B5 988 aa12.97□□□□□ -0.33
GTF3C1-201ENST00000356183 HIP1O00291 1037 aa12.97□□□□□ -0.33
GTF3C1-201ENST00000356183 XPCQ01831 940 aaPredicted RBP12.97□□□□□ -0.33
GTF3C1-201ENST00000356183 MATR3P43243 847 aaKnown RBP eCLIP12.97□□□□□ -0.33
GTF3C1-201ENST00000356183 RAI14Q9P0K7 980 aa12.97□□□□□ -0.33
GTF3C1-201ENST00000356183 PTPN14Q15678 1187 aa12.97□□□□□ -0.33
GTF3C1-201ENST00000356183 NUP133Q8WUM0 1156 aa12.97□□□□□ -0.33
GTF3C1-201ENST00000356183 PNISRQ8TF01 805 aaKnown RBP12.96□□□□□ -0.33
GTF3C1-201ENST00000356183 CCDC178Q5BJE1 867 aa12.96□□□□□ -0.33
GTF3C1-201ENST00000356183 SLC3A2P08195 630 aaKnown RBP12.96□□□□□ -0.33
GTF3C1-201ENST00000356183 ARHGAP29Q52LW3 1261 aa12.96□□□□□ -0.33
GTF3C1-201ENST00000356183 EIF5P55010 431 aaKnown RBP12.96□□□□□ -0.34
GTF3C1-201ENST00000356183 ZNF526Q8TF50 670 aaPredicted RBP12.96□□□□□ -0.34
GTF3C1-201ENST00000356183 ADAMTS8Q9UP79 889 aa12.96□□□□□ -0.34
GTF3C1-201ENST00000356183 SMTNL1A8MU46 457 aa12.96□□□□□ -0.34
GTF3C1-201ENST00000356183 NEBLO76041 1014 aa12.95□□□□□ -0.34
GTF3C1-201ENST00000356183 CFAP100Q494V2 611 aa12.95□□□□□ -0.34
GTF3C1-201ENST00000356183 FGD6Q6ZV73 1430 aa12.95□□□□□ -0.34
GTF3C1-201ENST00000356183 URI1O94763 535 aaPredicted RBP12.95□□□□□ -0.34
GTF3C1-201ENST00000356183 MIA2Q96PC5 1412 aa12.95□□□□□ -0.34
GTF3C1-201ENST00000356183 IFFO1Q0D2I5 559 aa12.94□□□□□ -0.34
GTF3C1-201ENST00000356183 CCDC184Q52MB2 194 aa12.94□□□□□ -0.34
GTF3C1-201ENST00000356183 CEP57L1Q8IYX8 460 aa12.94□□□□□ -0.34
GTF3C1-201ENST00000356183 DNA2P51530 1060 aa12.94□□□□□ -0.34
GTF3C1-201ENST00000356183 ANKRD1Q15327 319 aa12.94□□□□□ -0.34
GTF3C1-201ENST00000356183 PIBF1Q8WXW3 757 aa12.94□□□□□ -0.34
GTF3C1-201ENST00000356183 SSBP05455 408 aaKnown RBP eCLIP12.94□□□□□ -0.34
GTF3C1-201ENST00000356183 MICALCLQ6ZW33 695 aa12.94□□□□□ -0.34
GTF3C1-201ENST00000356183 MAP9Q49MG5 647 aa12.94□□□□□ -0.34
GTF3C1-201ENST00000356183 GBP3Q9H0R5 595 aa12.94□□□□□ -0.34
GTF3C1-201ENST00000356183 PDRG1Q9NUG6 133 aa12.94□□□□□ -0.34
GTF3C1-201ENST00000356183 GTF2A1P52655 376 aaPredicted RBP12.94□□□□□ -0.34
GTF3C1-201ENST00000356183 ZNF397Q8NF99 534 aaPredicted RBP12.94□□□□□ -0.34
GTF3C1-201ENST00000356183 SIL1Q9H173 461 aa12.94□□□□□ -0.34
GTF3C1-201ENST00000356183 TRMT1Q9NXH9 659 aaKnown RBP12.93□□□□□ -0.34
GTF3C1-201ENST00000356183 ERICH3Q5RHP9 1530 aa12.93□□□□□ -0.34
GTF3C1-201ENST00000356183 STAMBPO95630 424 aa12.93□□□□□ -0.34
GTF3C1-201ENST00000356183 SERPINA10Q9UK55 444 aa12.93□□□□□ -0.34
GTF3C1-201ENST00000356183 FANCD2Q9BXW9 1451 aa12.93□□□□□ -0.34
GTF3C1-201ENST00000356183 IGF1RP08069 1367 aa12.93□□□□□ -0.34
GTF3C1-201ENST00000356183 WDR97A6NE52 1622 aa12.92□□□□□ -0.34
GTF3C1-201ENST00000356183 C11orf95C9JLR9 678 aaPredicted RBP12.92□□□□□ -0.34
GTF3C1-201ENST00000356183 PSME1Q06323 249 aa12.92□□□□□ -0.34
GTF3C1-201ENST00000356183 LRRC9Q6ZRR7 1453 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms