RNA–Protein interactions for RNA: ENST00000355497.9

LMX1B-201, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,809 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-201ENST00000355497 DHX37Q8IY37 1157 aaKnown RBP17.57■□□□□ 0.4
LMX1B-201ENST00000355497 CCDC57Q2TAC2 916 aa17.57■□□□□ 0.4
LMX1B-201ENST00000355497 PKNOX2Q96KN3 472 aa17.57■□□□□ 0.4
LMX1B-201ENST00000355497 LRRCC1Q9C099 1032 aa17.57■□□□□ 0.4
LMX1B-201ENST00000355497 SMG6Q86US8 1419 aaKnown RBP17.57■□□□□ 0.4
LMX1B-201ENST00000355497 SEPT11Q9NVA2 429 aaKnown RBP17.57■□□□□ 0.4
LMX1B-201ENST00000355497 MYOM3Q5VTT5 1437 aa17.57■□□□□ 0.4
LMX1B-201ENST00000355497 RBM42Q9BTD8 480 aaKnown RBP17.56■□□□□ 0.4
LMX1B-201ENST00000355497 LARP1BQ659C4 914 aaKnown RBP17.56■□□□□ 0.4
LMX1B-201ENST00000355497 CDKL5O76039 1030 aa17.55■□□□□ 0.4
LMX1B-201ENST00000355497 CCT4P50991 539 aaKnown RBP17.55■□□□□ 0.4
LMX1B-201ENST00000355497 PDE3AQ14432 1141 aa17.55■□□□□ 0.4
LMX1B-201ENST00000355497 SPATA32Q96LK8 384 aa17.55■□□□□ 0.4
LMX1B-201ENST00000355497 ZSCAN25Q6NSZ9 544 aa17.55■□□□□ 0.4
LMX1B-201ENST00000355497 TOP2AP11388 1531 aaKnown RBP17.55■□□□□ 0.4
LMX1B-201ENST00000355497 PRKAR2BP31323 418 aa17.55■□□□□ 0.4
LMX1B-201ENST00000355497 NUP133Q8WUM0 1156 aa17.55■□□□□ 0.4
LMX1B-201ENST00000355497 CEP57L1Q8IYX8 460 aa17.54■□□□□ 0.4
LMX1B-201ENST00000355497 STK11IPQ8N1F8 1099 aa17.54■□□□□ 0.4
LMX1B-201ENST00000355497 CCDC102AQ96A19 550 aa17.54■□□□□ 0.4
LMX1B-201ENST00000355497 GPRASP1Q5JY77 1395 aa17.54■□□□□ 0.4
LMX1B-201ENST00000355497 JAKMIP3Q5VZ66 844 aa17.53■□□□□ 0.4
LMX1B-201ENST00000355497 LRRFIP2Q9Y608 721 aaKnown RBP17.53■□□□□ 0.4
LMX1B-201ENST00000355497 DESP17661 470 aa17.53■□□□□ 0.4
LMX1B-201ENST00000355497 TAF4BQ92750 862 aa17.53■□□□□ 0.4
LMX1B-201ENST00000355497 BMP2KQ9NSY1 1161 aaPredicted RBP17.53■□□□□ 0.4
LMX1B-201ENST00000355497 SMTNL1A8MU46 457 aa17.53■□□□□ 0.4
LMX1B-201ENST00000355497 MAP4K4O95819 1239 aaPredicted RBP17.53■□□□□ 0.4
LMX1B-201ENST00000355497 CDCA7LQ96GN5 454 aa17.53■□□□□ 0.4
LMX1B-201ENST00000355497 PPP2R1AP30153 589 aa17.52■□□□□ 0.4
LMX1B-201ENST00000355497 MPNDQ8N594 471 aa17.52■□□□□ 0.4
LMX1B-201ENST00000355497 NUP62CLQ9H1M0 184 aa17.52■□□□□ 0.4
LMX1B-201ENST00000355497 PDRG1Q9NUG6 133 aa17.52■□□□□ 0.4
LMX1B-201ENST00000355497 CFAP45Q9UL16 551 aa17.52■□□□□ 0.4
LMX1B-201ENST00000355497 ZSCAN31Q96LW9 406 aaPredicted RBP17.52■□□□□ 0.4
LMX1B-201ENST00000355497 SLC4A2P04920 1241 aa17.52■□□□□ 0.4
LMX1B-201ENST00000355497 UPF3BQ9BZI7 483 aaKnown RBP17.52■□□□□ 0.4
LMX1B-201ENST00000355497 KIAA1328Q86T90 577 aa17.51■□□□□ 0.39
LMX1B-201ENST00000355497 SRCIN1Q9C0H9 1055 aa17.51■□□□□ 0.39
LMX1B-201ENST00000355497 SIL1Q9H173 461 aa17.51■□□□□ 0.39
LMX1B-201ENST00000355497 CCDC148Q8NFR7 591 aa17.51■□□□□ 0.39
LMX1B-201ENST00000355497 EPB41L2O43491 1005 aaKnown RBP17.51■□□□□ 0.39
LMX1B-201ENST00000355497 ABTB2Q8N961 1025 aa17.5■□□□□ 0.39
LMX1B-201ENST00000355497 CUX1P39880 1505 aa17.5■□□□□ 0.39
LMX1B-201ENST00000355497 DYDC1Q8WWB3 177 aa17.5■□□□□ 0.39
LMX1B-201ENST00000355497 SCAPERQ9BY12 1400 aa17.5■□□□□ 0.39
LMX1B-201ENST00000355497 NEBLO76041 1014 aa17.5■□□□□ 0.39
LMX1B-201ENST00000355497 BLOC1S2Q6QNY1 142 aa17.5■□□□□ 0.39
LMX1B-201ENST00000355497 HDGFL1Q5TGJ6 251 aa17.5■□□□□ 0.39
LMX1B-201ENST00000355497 SSBP05455 408 aaKnown RBP eCLIP17.49■□□□□ 0.39
LMX1B-201ENST00000355497 PPP6R1Q9UPN7 881 aa17.49■□□□□ 0.39
LMX1B-201ENST00000355497 EIF5P55010 431 aaKnown RBP17.49■□□□□ 0.39
LMX1B-201ENST00000355497 PNISRQ8TF01 805 aaKnown RBP17.49■□□□□ 0.39
LMX1B-201ENST00000355497 TMEM132EQ6IEE7 984 aa17.48■□□□□ 0.39
LMX1B-201ENST00000355497 WASF1Q92558 559 aa17.48■□□□□ 0.39
LMX1B-201ENST00000355497 TATP17735 454 aaPredicted RBP17.48■□□□□ 0.39
LMX1B-201ENST00000355497 CADPSQ9ULU8 1353 aa17.48■□□□□ 0.39
LMX1B-201ENST00000355497 IL27Q8NEV9 243 aa17.48■□□□□ 0.39
LMX1B-201ENST00000355497 RRBP1Q9P2E9 1410 aaKnown RBP17.48■□□□□ 0.39
LMX1B-201ENST00000355497 FYCO1Q9BQS8 1478 aa17.48■□□□□ 0.39
LMX1B-201ENST00000355497 MATR3P43243 847 aaKnown RBP eCLIP17.48■□□□□ 0.39
LMX1B-201ENST00000355497 ARHGAP29Q52LW3 1261 aa17.48■□□□□ 0.39
LMX1B-201ENST00000355497 CCDC91Q7Z6B0 441 aa17.48■□□□□ 0.39
LMX1B-201ENST00000355497 SLC26A8Q96RN1 970 aa17.48■□□□□ 0.39
LMX1B-201ENST00000355497 CTNNA3Q9UI47 895 aa17.48■□□□□ 0.39
LMX1B-201ENST00000355497 ERICH4A6NGS2 130 aa17.47■□□□□ 0.39
LMX1B-201ENST00000355497 ZNF397Q8NF99 534 aaPredicted RBP17.47■□□□□ 0.39
LMX1B-201ENST00000355497 TAF3Q5VWG9 929 aa17.47■□□□□ 0.39
LMX1B-201ENST00000355497 TSR2Q969E8 191 aaKnown RBP17.47■□□□□ 0.39
LMX1B-201ENST00000355497 JAKMIP1Q96N16 626 aaKnown RBP17.47■□□□□ 0.39
LMX1B-201ENST00000355497 AACSQ86V21 672 aa17.47■□□□□ 0.39
LMX1B-201ENST00000355497 UBAC1Q9BSL1 405 aa17.47■□□□□ 0.39
LMX1B-201ENST00000355497 GBP3Q9H0R5 595 aa17.47■□□□□ 0.39
LMX1B-201ENST00000355497 CHD1LQ86WJ1 897 aa17.46■□□□□ 0.39
LMX1B-201ENST00000355497 CIZ1Q9ULV3 898 aaPredicted RBP17.46■□□□□ 0.39
LMX1B-201ENST00000355497 KRT32Q14532 448 aa17.46■□□□□ 0.39
LMX1B-201ENST00000355497 FILIP1Q7Z7B0 1213 aa17.46■□□□□ 0.39
LMX1B-201ENST00000355497 CEP131Q9UPN4 1083 aa17.46■□□□□ 0.39
LMX1B-201ENST00000355497 BCAR3O75815 825 aa17.46■□□□□ 0.38
LMX1B-201ENST00000355497 CABP4P57796 275 aa17.46■□□□□ 0.38
LMX1B-201ENST00000355497 UBXN4Q92575 508 aa17.46■□□□□ 0.38
LMX1B-201ENST00000355497 SSR1P43307 286 aaKnown RBP17.45■□□□□ 0.38
LMX1B-201ENST00000355497 FKBP4Q02790 459 aaKnown RBP eCLIP17.45■□□□□ 0.38
LMX1B-201ENST00000355497 SHTN1A0MZ66 631 aa17.45■□□□□ 0.38
LMX1B-201ENST00000355497 MPHOSPH10O00566 681 aaKnown RBP17.45■□□□□ 0.38
LMX1B-201ENST00000355497 ZNF76P36508 570 aa17.45■□□□□ 0.38
LMX1B-201ENST00000355497 TDO2P48775 406 aa17.45■□□□□ 0.38
LMX1B-201ENST00000355497 PDCL2Q8N4E4 241 aa17.45■□□□□ 0.38
LMX1B-201ENST00000355497 GIMAP7Q8NHV1 300 aa17.45■□□□□ 0.38
LMX1B-201ENST00000355497 POTEJP0CG39 1038 aa17.45■□□□□ 0.38
LMX1B-201ENST00000355497 PDIA4P13667 645 aaKnown RBP17.45■□□□□ 0.38
LMX1B-201ENST00000355497 CRACR2AQ9BSW2 395 aa17.45■□□□□ 0.38
LMX1B-201ENST00000355497 ESCO1Q5FWF5 840 aa17.44■□□□□ 0.38
LMX1B-201ENST00000355497 MPHOSPH8Q99549 860 aa17.44■□□□□ 0.38
LMX1B-201ENST00000355497 FGD6Q6ZV73 1430 aa17.44■□□□□ 0.38
LMX1B-201ENST00000355497 MAP2K1Q02750 393 aaPredicted RBP17.44■□□□□ 0.38
LMX1B-201ENST00000355497 MAP3K11Q16584 847 aa17.44■□□□□ 0.38
LMX1B-201ENST00000355497 TMCO3Q6UWJ1 677 aa17.44■□□□□ 0.38
LMX1B-201ENST00000355497 RBM5P52756 815 aaKnown RBP eCLIP17.44■□□□□ 0.38
LMX1B-201ENST00000355497 BACH2Q9BYV9 841 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 67.7 ms