RNA–Protein interactions for RNA: ENST00000354268.8

SMARCAD1-201, Transcript of SWI/SNF-related, matrix-associated actin-dependent regulator of chromatin, subfamily a, containing DEAD/H box 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMARCAD1, Length 4,912 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCAD1-201ENST00000354268 FAM129BQ96TA1 746 aa3.09□□□□□ -1.92
SMARCAD1-201ENST00000354268 PATL2C9JE40 543 aaKnown RBP3.08□□□□□ -1.92
SMARCAD1-201ENST00000354268 F12P00748 615 aaPredicted RBP3.08□□□□□ -1.92
SMARCAD1-201ENST00000354268 ASB16Q96NS5 453 aa3.08□□□□□ -1.92
SMARCAD1-201ENST00000354268 CNTN3Q9P232 1028 aa3.08□□□□□ -1.92
SMARCAD1-201ENST00000354268 U2SURPO15042 1029 aaKnown RBP3.08□□□□□ -1.92
SMARCAD1-201ENST00000354268 TGFB3P10600 412 aa3.08□□□□□ -1.92
SMARCAD1-201ENST00000354268 RFX1P22670 979 aa3.08□□□□□ -1.92
SMARCAD1-201ENST00000354268 BACH2Q9BYV9 841 aa3.08□□□□□ -1.92
SMARCAD1-201ENST00000354268 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP3.08□□□□□ -1.92
SMARCAD1-201ENST00000354268 KLF4O43474 513 aa3.08□□□□□ -1.92
SMARCAD1-201ENST00000354268 CDK11BP21127 795 aaKnown RBP3.08□□□□□ -1.92
SMARCAD1-201ENST00000354268 NAALADL2Q58DX5 795 aa3.08□□□□□ -1.92
SMARCAD1-201ENST00000354268 SLC39A7Q92504 469 aa3.08□□□□□ -1.92
SMARCAD1-201ENST00000354268 EPHA4P54764 986 aa3.08□□□□□ -1.92
SMARCAD1-201ENST00000354268 PPARGC1BQ86YN6 1023 aaKnown RBP3.08□□□□□ -1.92
SMARCAD1-201ENST00000354268 ALKBH8Q96BT7 664 aaKnown RBP3.08□□□□□ -1.92
SMARCAD1-201ENST00000354268 ZBTB47Q9UFB7 747 aaPredicted RBP3.08□□□□□ -1.92
SMARCAD1-201ENST00000354268 USP31Q70CQ4 1352 aa3.08□□□□□ -1.92
SMARCAD1-201ENST00000354268 FZD9O00144 591 aa3.07□□□□□ -1.92
SMARCAD1-201ENST00000354268 MLLT1Q03111 559 aaPredicted RBP3.07□□□□□ -1.92
SMARCAD1-201ENST00000354268 SIX5Q8N196 739 aa3.07□□□□□ -1.92
SMARCAD1-201ENST00000354268 GJA8P48165 433 aa3.07□□□□□ -1.92
SMARCAD1-201ENST00000354268 PRPF38BQ5VTL8 546 aaKnown RBP3.07□□□□□ -1.92
SMARCAD1-201ENST00000354268 RNPC3Q96LT9 517 aaKnown RBP3.07□□□□□ -1.92
SMARCAD1-201ENST00000354268 FAM50BQ9Y247 325 aa3.07□□□□□ -1.92
SMARCAD1-201ENST00000354268 CFAP99D6REC4 459 aa3.07□□□□□ -1.92
SMARCAD1-201ENST00000354268 SIM2Q14190 667 aaPredicted RBP3.07□□□□□ -1.92
SMARCAD1-201ENST00000354268 PLEKHG4Q58EX7 1191 aa3.07□□□□□ -1.92
SMARCAD1-201ENST00000354268 HDGFL1Q5TGJ6 251 aa3.07□□□□□ -1.92
SMARCAD1-201ENST00000354268 ASTLQ6HA08 431 aaPredicted RBP3.07□□□□□ -1.92
SMARCAD1-201ENST00000354268 VTI1AQ96AJ9 217 aa3.07□□□□□ -1.92
SMARCAD1-201ENST00000354268 TFIP11Q9UBB9 837 aaKnown RBP3.07□□□□□ -1.92
SMARCAD1-201ENST00000354268 ZNF330Q9Y3S2 320 aaPredicted RBP3.07□□□□□ -1.92
SMARCAD1-201ENST00000354268 P4HBP07237 508 aaKnown RBP3.07□□□□□ -1.92
SMARCAD1-201ENST00000354268 SMC5Q8IY18 1101 aa3.07□□□□□ -1.92
SMARCAD1-201ENST00000354268 WDR70Q9NW82 654 aa3.07□□□□□ -1.92
SMARCAD1-201ENST00000354268 GTF3C5Q9Y5Q8 519 aaPredicted RBP3.07□□□□□ -1.92
SMARCAD1-201ENST00000354268 FAM196BA6NMK8 535 aa3.06□□□□□ -1.92
SMARCAD1-201ENST00000354268 RASA3Q14644 834 aa3.06□□□□□ -1.92
SMARCAD1-201ENST00000354268 ERFEQ4G0M1 354 aa3.06□□□□□ -1.92
SMARCAD1-201ENST00000354268 MICAL1Q8TDZ2 1067 aa3.06□□□□□ -1.92
SMARCAD1-201ENST00000354268 PRRX2Q99811 253 aa3.06□□□□□ -1.92
SMARCAD1-201ENST00000354268 TTF2Q9UNY4 1162 aaKnown RBP3.06□□□□□ -1.92
SMARCAD1-201ENST00000354268 DAB2P98082 770 aa3.06□□□□□ -1.92
SMARCAD1-201ENST00000354268 TSR1Q2NL82 804 aaKnown RBP3.06□□□□□ -1.92
SMARCAD1-201ENST00000354268 TSGA10IPQ3SY00 556 aa3.06□□□□□ -1.92
SMARCAD1-201ENST00000354268 KIAA0907Q7Z7F0 614 aaPredicted RBP3.06□□□□□ -1.92
SMARCAD1-201ENST00000354268 DDX41Q9UJV9 622 aaKnown RBP3.06□□□□□ -1.92
SMARCAD1-201ENST00000354268 ATP9BO43861 1147 aa3.06□□□□□ -1.92
SMARCAD1-201ENST00000354268 TMEM259Q4ZIN3 620 aa3.06□□□□□ -1.92
SMARCAD1-201ENST00000354268 RASGRP4Q8TDF6 673 aa3.06□□□□□ -1.92
SMARCAD1-201ENST00000354268 TREHO43280 583 aa3.05□□□□□ -1.92
SMARCAD1-201ENST00000354268 RAPGEF3O95398 923 aa3.05□□□□□ -1.92
SMARCAD1-201ENST00000354268 CCDC144BQ3MJ40 725 aa3.05□□□□□ -1.92
SMARCAD1-201ENST00000354268 SLC10A5Q5PT55 438 aa3.05□□□□□ -1.92
SMARCAD1-201ENST00000354268 FAM43BQ6ZT52 329 aaPredicted RBP3.05□□□□□ -1.92
SMARCAD1-201ENST00000354268 NKAIN3Q8N8D7 197 aa3.05□□□□□ -1.92
SMARCAD1-201ENST00000354268 CARD10Q9BWT7 1032 aa3.05□□□□□ -1.92
SMARCAD1-201ENST00000354268 BCCIPQ9P287 314 aaKnown RBP eCLIP3.05□□□□□ -1.92
SMARCAD1-201ENST00000354268 CECR2Q9BXF3 1484 aa3.05□□□□□ -1.92
SMARCAD1-201ENST00000354268 NLRP6P59044 892 aa3.05□□□□□ -1.92
SMARCAD1-201ENST00000354268 SDE2Q6IQ49 451 aa3.05□□□□□ -1.92
SMARCAD1-201ENST00000354268 COL26A1Q96A83 441 aa3.05□□□□□ -1.92
SMARCAD1-201ENST00000354268 PCDHGA10Q9Y5H3 936 aa3.05□□□□□ -1.92
SMARCAD1-201ENST00000354268 RBAK-RBAKDNI3L0D1 243 aa3.05□□□□□ -1.92
SMARCAD1-201ENST00000354268 WEE1P30291 646 aa3.05□□□□□ -1.92
SMARCAD1-201ENST00000354268 C16orf54Q6UWD8 224 aa3.05□□□□□ -1.92
SMARCAD1-201ENST00000354268 LRRC4BQ9NT99 713 aa3.05□□□□□ -1.92
SMARCAD1-201ENST00000354268 HRH3Q9Y5N1 445 aa3.05□□□□□ -1.92
SMARCAD1-201ENST00000354268 BDNFP23560 247 aa3.05□□□□□ -1.92
SMARCAD1-201ENST00000354268 IGF2-ASQ6U949 168 aa3.05□□□□□ -1.92
SMARCAD1-201ENST00000354268 KIAA1024Q9UPX6 916 aa3.05□□□□□ -1.92
SMARCAD1-201ENST00000354268 NR2E3Q9Y5X4 410 aa3.05□□□□□ -1.92
SMARCAD1-201ENST00000354268 ANKRD33BA6NCL7 494 aa3.04□□□□□ -1.92
SMARCAD1-201ENST00000354268 CLK2P49760 499 aaKnown RBP3.04□□□□□ -1.92
SMARCAD1-201ENST00000354268 SETDB2Q96T68 719 aa3.04□□□□□ -1.92
SMARCAD1-201ENST00000354268 KIF2CQ99661 725 aa3.04□□□□□ -1.92
SMARCAD1-201ENST00000354268 ANKFY1Q9P2R3 1169 aa3.04□□□□□ -1.92
SMARCAD1-201ENST00000354268 EYA4O95677 639 aa3.04□□□□□ -1.92
SMARCAD1-201ENST00000354268 MICALL2Q8IY33 904 aa3.04□□□□□ -1.92
SMARCAD1-201ENST00000354268 EXOC8Q8IYI6 725 aa3.04□□□□□ -1.92
SMARCAD1-201ENST00000354268 TMTC2Q8N394 836 aa3.04□□□□□ -1.92
SMARCAD1-201ENST00000354268 ZNF700Q9H0M5 742 aa3.04□□□□□ -1.92
SMARCAD1-201ENST00000354268 SALL3Q9BXA9 1300 aa3.04□□□□□ -1.92
SMARCAD1-201ENST00000354268 ESPNB1AK53 854 aa3.04□□□□□ -1.92
SMARCAD1-201ENST00000354268 FCHSD2O94868 740 aa3.04□□□□□ -1.92
SMARCAD1-201ENST00000354268 NBPF9Q3BBW0 867 aa3.04□□□□□ -1.92
SMARCAD1-201ENST00000354268 ERMP1Q7Z2K6 904 aa3.04□□□□□ -1.92
SMARCAD1-201ENST00000354268 KIFC2Q96AC6 838 aa3.04□□□□□ -1.92
SMARCAD1-201ENST00000354268 TGIF2Q9GZN2 237 aa3.04□□□□□ -1.92
SMARCAD1-201ENST00000354268 EID1Q9Y6B2 187 aa3.04□□□□□ -1.92
SMARCAD1-201ENST00000354268 TMEM238LA0A1B0GVL6 79 aa3.04□□□□□ -1.92
SMARCAD1-201ENST00000354268 FAM161AQ3B820 660 aa3.04□□□□□ -1.92
SMARCAD1-201ENST00000354268 SMYD5Q6GMV2 418 aa3.04□□□□□ -1.92
SMARCAD1-201ENST00000354268 SLX1AQ9BQ83 275 aa3.04□□□□□ -1.92
SMARCAD1-201ENST00000354268 PGAP2Q9UHJ9 254 aa3.04□□□□□ -1.92
SMARCAD1-201ENST00000354268 PHTF1Q9UMS5 762 aa3.04□□□□□ -1.92
SMARCAD1-201ENST00000354268 EDARQ9UNE0 448 aa3.04□□□□□ -1.92
SMARCAD1-201ENST00000354268 TOP2BQ02880 1626 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms