RNA–Protein interactions for RNA: ENST00000349311.12

UBE2D3-204, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene UBE2D3, Length 838 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-204ENST00000349311 TNFRSF10AO00220 468 aa11.79□□□□□ -0.52
UBE2D3-204ENST00000349311 CARD14Q9BXL6 1004 aa11.79□□□□□ -0.52
UBE2D3-204ENST00000349311 HMGXB3Q12766 1538 aa11.78□□□□□ -0.52
UBE2D3-204ENST00000349311 GRM5P41594 1212 aa11.78□□□□□ -0.52
UBE2D3-204ENST00000349311 MCCD1P59942 119 aaPredicted RBP11.78□□□□□ -0.52
UBE2D3-204ENST00000349311 PDZRN3Q9UPQ7 1066 aa11.78□□□□□ -0.52
UBE2D3-204ENST00000349311 VAC14Q08AM6 782 aa11.77□□□□□ -0.53
UBE2D3-204ENST00000349311 CDV3Q9UKY7 258 aaKnown RBP11.77□□□□□ -0.53
UBE2D3-204ENST00000349311 TLL2Q9Y6L7 1015 aa11.77□□□□□ -0.53
UBE2D3-204ENST00000349311 NRG2O14511 850 aaPredicted RBP11.76□□□□□ -0.53
UBE2D3-204ENST00000349311 SMPD1P17405 629 aa11.76□□□□□ -0.53
UBE2D3-204ENST00000349311 ALG2Q9H553 416 aa11.76□□□□□ -0.53
UBE2D3-204ENST00000349311 ESPNB1AK53 854 aa11.75□□□□□ -0.53
UBE2D3-204ENST00000349311 TRAK2O60296 914 aa11.75□□□□□ -0.53
UBE2D3-204ENST00000349311 CYP4X1Q8N118 509 aa11.75□□□□□ -0.53
UBE2D3-204ENST00000349311 J3QL48 77 aa11.74□□□□□ -0.53
UBE2D3-204ENST00000349311 ADH1CP00326 375 aa11.74□□□□□ -0.53
UBE2D3-204ENST00000349311 SOX11P35716 441 aa11.74□□□□□ -0.53
UBE2D3-204ENST00000349311 ZNF330Q9Y3S2 320 aaPredicted RBP11.74□□□□□ -0.53
UBE2D3-204ENST00000349311 POM121CA8CG34 1229 aa11.73□□□□□ -0.53
UBE2D3-204ENST00000349311 GFRA3O60609 400 aa11.73□□□□□ -0.53
UBE2D3-204ENST00000349311 NCAPD3P42695 1498 aa11.73□□□□□ -0.53
UBE2D3-204ENST00000349311 LAPTM4AQ15012 233 aa11.73□□□□□ -0.53
UBE2D3-204ENST00000349311 ACIN1Q9UKV3 1341 aaKnown RBP11.73□□□□□ -0.53
UBE2D3-204ENST00000349311 AVPP01185 164 aa11.72□□□□□ -0.53
UBE2D3-204ENST00000349311 EIF4G2P78344 907 aaKnown RBP eCLIP11.72□□□□□ -0.53
UBE2D3-204ENST00000349311 ERICH6Q7L0X2 663 aa11.72□□□□□ -0.53
UBE2D3-204ENST00000349311 DZIP3Q86Y13 1208 aaKnown RBP11.72□□□□□ -0.53
UBE2D3-204ENST00000349311 WWC1Q8IX03 1113 aa11.72□□□□□ -0.53
UBE2D3-204ENST00000349311 ADAMTS19Q8TE59 1207 aa11.72□□□□□ -0.53
UBE2D3-204ENST00000349311 ZNF592Q92610 1267 aa11.72□□□□□ -0.53
UBE2D3-204ENST00000349311 SLC10A4Q96EP9 437 aa11.72□□□□□ -0.53
UBE2D3-204ENST00000349311 ALDH1A1P00352 501 aa11.71□□□□□ -0.53
UBE2D3-204ENST00000349311 NR5A1Q13285 461 aa11.71□□□□□ -0.53
UBE2D3-204ENST00000349311 PHTF2Q8N3S3 785 aa11.71□□□□□ -0.53
UBE2D3-204ENST00000349311 BAZ1BQ9UIG0 1483 aaKnown RBP11.7□□□□□ -0.54
UBE2D3-204ENST00000349311 TTC24A2A3L6 582 aaPredicted RBP11.7□□□□□ -0.54
UBE2D3-204ENST00000349311 KCTD15Q96SI1 283 aaPredicted RBP11.7□□□□□ -0.54
UBE2D3-204ENST00000349311 KLF16Q9BXK1 252 aaPredicted RBP11.7□□□□□ -0.54
UBE2D3-204ENST00000349311 CEP126Q9P2H0 1117 aa11.7□□□□□ -0.54
UBE2D3-204ENST00000349311 VASH1Q7L8A9 365 aaPredicted RBP11.69□□□□□ -0.54
UBE2D3-204ENST00000349311 C14orf37Q86TY3 774 aa11.69□□□□□ -0.54
UBE2D3-204ENST00000349311 IRX2Q9BZI1 471 aaPredicted RBP11.69□□□□□ -0.54
UBE2D3-204ENST00000349311 CHIC2Q9UKJ5 165 aa11.69□□□□□ -0.54
UBE2D3-204ENST00000349311 TIMELESSQ9UNS1 1208 aa11.69□□□□□ -0.54
UBE2D3-204ENST00000349311 PCDHB9Q9Y5E1 797 aa11.69□□□□□ -0.54
UBE2D3-204ENST00000349311 DGAT1O75907 488 aa11.68□□□□□ -0.54
UBE2D3-204ENST00000349311 CENPBP07199 599 aaPredicted RBP11.68□□□□□ -0.54
UBE2D3-204ENST00000349311 NR3C2P08235 984 aa11.68□□□□□ -0.54
UBE2D3-204ENST00000349311 NBPF20Q3BBV1 942 aa11.68□□□□□ -0.54
UBE2D3-204ENST00000349311 SEPT12Q8IYM1 358 aa11.68□□□□□ -0.54
UBE2D3-204ENST00000349311 INTS6LQ5JSJ4 861 aaKnown RBP11.67□□□□□ -0.54
UBE2D3-204ENST00000349311 CC2D2AQ9P2K1 1620 aa11.67□□□□□ -0.54
UBE2D3-204ENST00000349311 CCDC88BA6NC98 1476 aa11.66□□□□□ -0.54
UBE2D3-204ENST00000349311 GIGYF1O75420 1035 aaPredicted RBP11.66□□□□□ -0.54
UBE2D3-204ENST00000349311 ARID5BQ14865 1188 aa11.66□□□□□ -0.54
UBE2D3-204ENST00000349311 NNTQ13423 1086 aa11.65□□□□□ -0.54
UBE2D3-204ENST00000349311 CCDC125Q86Z20 511 aa11.65□□□□□ -0.54
UBE2D3-204ENST00000349311 HPS1Q92902 700 aa11.65□□□□□ -0.54
UBE2D3-204ENST00000349311 FSHRP23945 695 aa11.64□□□□□ -0.55
UBE2D3-204ENST00000349311 CRIPAKQ8N1N5 446 aa11.64□□□□□ -0.55
UBE2D3-204ENST00000349311 WASF2Q9Y6W5 498 aa11.64□□□□□ -0.55
UBE2D3-204ENST00000349311 SMCPP49901 116 aaPredicted RBP11.63□□□□□ -0.55
UBE2D3-204ENST00000349311 SEMA3FQ13275 785 aa11.63□□□□□ -0.55
UBE2D3-204ENST00000349311 PRDM2Q13029 1718 aa11.63□□□□□ -0.55
UBE2D3-204ENST00000349311 HDGFL1Q5TGJ6 251 aa11.62□□□□□ -0.55
UBE2D3-204ENST00000349311 CCDC116Q8IYX3 515 aa11.62□□□□□ -0.55
UBE2D3-204ENST00000349311 FAM187AA6NFU0 413 aa11.61□□□□□ -0.55
UBE2D3-204ENST00000349311 GLMNQ92990 594 aa11.61□□□□□ -0.55
UBE2D3-204ENST00000349311 LCE2BO14633 110 aa11.6□□□□□ -0.55
UBE2D3-204ENST00000349311 RNF20Q5VTR2 975 aa11.6□□□□□ -0.55
UBE2D3-204ENST00000349311 UCN2Q96RP3 112 aa11.6□□□□□ -0.55
UBE2D3-204ENST00000349311 ERVH48-1M5A8F1 160 aa11.59□□□□□ -0.55
UBE2D3-204ENST00000349311 TIMP2P16035 220 aa11.59□□□□□ -0.55
UBE2D3-204ENST00000349311 DHX9Q08211 1270 aaKnown RBP11.59□□□□□ -0.55
UBE2D3-204ENST00000349311 TRAF7Q6Q0C0 670 aa11.59□□□□□ -0.55
UBE2D3-204ENST00000349311 CCDC85AQ96PX6 553 aaPredicted RBP11.59□□□□□ -0.55
UBE2D3-204ENST00000349311 ZNF777Q9ULD5 760 aaPredicted RBP11.59□□□□□ -0.55
UBE2D3-204ENST00000349311 CTC1Q2NKJ3 1217 aa11.58□□□□□ -0.56
UBE2D3-204ENST00000349311 TSGA10IPQ3SY00 556 aa11.58□□□□□ -0.56
UBE2D3-204ENST00000349311 PKDCCQ504Y2 493 aa11.58□□□□□ -0.56
UBE2D3-204ENST00000349311 PPP1R26Q5T8A7 1209 aaPredicted RBP11.58□□□□□ -0.56
UBE2D3-204ENST00000349311 NFATC2IPQ8NCF5 419 aa11.58□□□□□ -0.56
UBE2D3-204ENST00000349311 EMILIN1Q9Y6C2 1016 aa11.58□□□□□ -0.56
UBE2D3-204ENST00000349311 PIK3CDO00329 1044 aa11.56□□□□□ -0.56
UBE2D3-204ENST00000349311 LILRA1O75019 489 aa11.56□□□□□ -0.56
UBE2D3-204ENST00000349311 ITPKCQ96DU7 683 aa11.56□□□□□ -0.56
UBE2D3-204ENST00000349311 TMPRSS4Q9NRS4 437 aa11.56□□□□□ -0.56
UBE2D3-204ENST00000349311 NEUROD1Q13562 356 aa11.55□□□□□ -0.56
UBE2D3-204ENST00000349311 WDR4P57081 412 aaKnown RBP11.54□□□□□ -0.56
UBE2D3-204ENST00000349311 ERVK-9P63128 1117 aa11.54□□□□□ -0.56
UBE2D3-204ENST00000349311 SLFNL1Q499Z3 407 aa11.54□□□□□ -0.56
UBE2D3-204ENST00000349311 Q6ZVU0 165 aa11.54□□□□□ -0.56
UBE2D3-204ENST00000349311 AAASQ9NRG9 546 aa11.54□□□□□ -0.56
UBE2D3-204ENST00000349311 ZIC2O95409 532 aaPredicted RBP11.53□□□□□ -0.56
UBE2D3-204ENST00000349311 MAP7D1Q3KQU3 841 aa11.53□□□□□ -0.56
UBE2D3-204ENST00000349311 ZNF784Q8NCA9 323 aaPredicted RBP11.53□□□□□ -0.56
UBE2D3-204ENST00000349311 CALR3Q96L12 384 aaKnown RBP11.53□□□□□ -0.56
UBE2D3-204ENST00000349311 CDCA7Q9BWT1 371 aaPredicted RBP11.53□□□□□ -0.56
UBE2D3-204ENST00000349311 C1orf115Q9H7X2 142 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms