RNA–Protein interactions for RNA: ENST00000347968.7

MBD1-204, Transcript of methyl-CpG binding domain protein 1, humanhuman

TSL 1 (best) BASIC

Gene MBD1, Length 3,091 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD1-204ENST00000347968 NUCB2P80303 420 aa19.82■□□□□ 0.76
MBD1-204ENST00000347968 CHD1LQ86WJ1 897 aa19.82■□□□□ 0.76
MBD1-204ENST00000347968 RIMBP3CA6NJZ7 1639 aa19.82■□□□□ 0.76
MBD1-204ENST00000347968 RIMBP3BA6NNM3 1639 aa19.82■□□□□ 0.76
MBD1-204ENST00000347968 RIMBP3Q9UFD9 1639 aa19.82■□□□□ 0.76
MBD1-204ENST00000347968 NOL8Q76FK4 1167 aaKnown RBP19.82■□□□□ 0.76
MBD1-204ENST00000347968 KIDINS220Q9ULH0 1771 aa19.82■□□□□ 0.76
MBD1-204ENST00000347968 KANK1Q14678 1352 aa19.81■□□□□ 0.76
MBD1-204ENST00000347968 HDAC1Q13547 482 aaPredicted RBP19.81■□□□□ 0.76
MBD1-204ENST00000347968 POGZQ7Z3K3 1410 aa19.8■□□□□ 0.76
MBD1-204ENST00000347968 NUCB1Q02818 461 aa19.8■□□□□ 0.76
MBD1-204ENST00000347968 ADCY5O95622 1261 aa19.79■□□□□ 0.76
MBD1-204ENST00000347968 CYP2E1P05181 493 aaPredicted RBP19.79■□□□□ 0.76
MBD1-204ENST00000347968 SPC24Q8NBT2 197 aa19.79■□□□□ 0.76
MBD1-204ENST00000347968 CHMP4CQ96CF2 233 aa19.79■□□□□ 0.76
MBD1-204ENST00000347968 ATP10AO60312 1499 aa19.79■□□□□ 0.76
MBD1-204ENST00000347968 NOB1Q9ULX3 412 aaKnown RBP19.79■□□□□ 0.76
MBD1-204ENST00000347968 PYCARDQ9ULZ3 195 aa19.79■□□□□ 0.76
MBD1-204ENST00000347968 FKBP5Q13451 457 aaPredicted RBP19.79■□□□□ 0.76
MBD1-204ENST00000347968 TAF3Q5VWG9 929 aa19.79■□□□□ 0.76
MBD1-204ENST00000347968 TRIM6-TRIM34B2RNG4 842 aa19.78■□□□□ 0.76
MBD1-204ENST00000347968 SSH1Q8WYL5 1049 aa19.78■□□□□ 0.76
MBD1-204ENST00000347968 TRIM34Q9BYJ4 488 aa19.78■□□□□ 0.76
MBD1-204ENST00000347968 EXOSC9Q06265 439 aaKnown RBP19.78■□□□□ 0.76
MBD1-204ENST00000347968 TRPM1Q7Z4N2 1603 aa19.78■□□□□ 0.76
MBD1-204ENST00000347968 PIK3C2GO75747 1445 aa19.77■□□□□ 0.76
MBD1-204ENST00000347968 UGGT1Q9NYU2 1555 aa19.77■□□□□ 0.76
MBD1-204ENST00000347968 SLFN14P0C7P3 912 aa19.77■□□□□ 0.76
MBD1-204ENST00000347968 CHGAP10645 457 aaKnown RBP19.77■□□□□ 0.75
MBD1-204ENST00000347968 SMARCA5O60264 1052 aaPredicted RBP19.76■□□□□ 0.75
MBD1-204ENST00000347968 BMP2KLQ5H9B9 411 aa19.76■□□□□ 0.75
MBD1-204ENST00000347968 GADD45BO75293 160 aaPredicted RBP19.76■□□□□ 0.75
MBD1-204ENST00000347968 ST7Q9NRC1 585 aa19.76■□□□□ 0.75
MBD1-204ENST00000347968 HCLS1P14317 486 aaPredicted RBP19.75■□□□□ 0.75
MBD1-204ENST00000347968 CAPN2P17655 700 aa19.75■□□□□ 0.75
MBD1-204ENST00000347968 SENP3Q9H4L4 574 aaPredicted RBP19.75■□□□□ 0.75
MBD1-204ENST00000347968 DDX19BQ9UMR2 479 aa19.75■□□□□ 0.75
MBD1-204ENST00000347968 ANKRD7Q92527 254 aa19.75■□□□□ 0.75
MBD1-204ENST00000347968 NCBP1Q09161 790 aaKnown RBP19.74■□□□□ 0.75
MBD1-204ENST00000347968 CHAF1AQ13111 956 aaPredicted RBP19.74■□□□□ 0.75
MBD1-204ENST00000347968 OGFRQ9NZT2 677 aa19.74■□□□□ 0.75
MBD1-204ENST00000347968 MROH1Q8NDA8 1641 aa19.73■□□□□ 0.75
MBD1-204ENST00000347968 CARD14Q9BXL6 1004 aa19.73■□□□□ 0.75
MBD1-204ENST00000347968 ASXL1Q8IXJ9 1541 aa19.73■□□□□ 0.75
MBD1-204ENST00000347968 GPRASP1Q5JY77 1395 aa19.73■□□□□ 0.75
MBD1-204ENST00000347968 CFAP65Q6ZU64 1925 aaKnown RBP19.73■□□□□ 0.75
MBD1-204ENST00000347968 DEPDC5O75140 1603 aa19.72■□□□□ 0.75
MBD1-204ENST00000347968 RUNDC1Q96C34 613 aa19.72■□□□□ 0.75
MBD1-204ENST00000347968 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.72■□□□□ 0.75
MBD1-204ENST00000347968 V9GYY5 206 aaPredicted RBP19.72■□□□□ 0.75
MBD1-204ENST00000347968 ATF7IPQ6VMQ6 1270 aa19.72■□□□□ 0.75
MBD1-204ENST00000347968 ZBTB40Q9NUA8 1239 aa19.72■□□□□ 0.75
MBD1-204ENST00000347968 CLTCL1P53675 1640 aa19.71■□□□□ 0.75
MBD1-204ENST00000347968 TIGD1Q96MW7 591 aa19.7■□□□□ 0.74
MBD1-204ENST00000347968 CTNNA3Q9UI47 895 aa19.7■□□□□ 0.74
MBD1-204ENST00000347968 KCNF1Q9H3M0 494 aa19.7■□□□□ 0.74
MBD1-204ENST00000347968 FRMPD1Q5SYB0 1578 aa19.7■□□□□ 0.74
MBD1-204ENST00000347968 YEATS2Q9ULM3 1422 aa19.7■□□□□ 0.74
MBD1-204ENST00000347968 APBB1O00213 710 aa19.7■□□□□ 0.74
MBD1-204ENST00000347968 RABEP1Q15276 862 aa19.7■□□□□ 0.74
MBD1-204ENST00000347968 C16orf45Q96MC5 204 aaPredicted RBP19.7■□□□□ 0.74
MBD1-204ENST00000347968 IRX3P78415 501 aaPredicted RBP19.69■□□□□ 0.74
MBD1-204ENST00000347968 DIAPH3Q9NSV4 1193 aa19.69■□□□□ 0.74
MBD1-204ENST00000347968 SPTLC3Q9NUV7 552 aa19.69■□□□□ 0.74
MBD1-204ENST00000347968 HECW2Q9P2P5 1572 aa19.69■□□□□ 0.74
MBD1-204ENST00000347968 TSPOAP1O95153 1857 aa19.69■□□□□ 0.74
MBD1-204ENST00000347968 ABCA6Q8N139 1617 aa19.69■□□□□ 0.74
MBD1-204ENST00000347968 DTNBO60941 627 aa19.68■□□□□ 0.74
MBD1-204ENST00000347968 TET3O43151 1660 aa19.68■□□□□ 0.74
MBD1-204ENST00000347968 TRPM2O94759 1503 aa19.68■□□□□ 0.74
MBD1-204ENST00000347968 PRDM15P57071 1507 aaPredicted RBP19.68■□□□□ 0.74
MBD1-204ENST00000347968 GSPT1P15170 499 aaKnown RBP19.68■□□□□ 0.74
MBD1-204ENST00000347968 SPHKAPQ2M3C7 1700 aa19.68■□□□□ 0.74
MBD1-204ENST00000347968 PTPRTO14522 1441 aa19.68■□□□□ 0.74
MBD1-204ENST00000347968 CFAP74Q9C0B2 1584 aa19.68■□□□□ 0.74
MBD1-204ENST00000347968 CDC45O75419 566 aa19.67■□□□□ 0.74
MBD1-204ENST00000347968 FEZ1Q99689 392 aa19.67■□□□□ 0.74
MBD1-204ENST00000347968 MLH3Q9UHC1 1453 aa19.67■□□□□ 0.74
MBD1-204ENST00000347968 TERF2Q15554 542 aa19.67■□□□□ 0.74
MBD1-204ENST00000347968 VWDEQ8N2E2 1590 aa19.67■□□□□ 0.74
MBD1-204ENST00000347968 CEP152O94986 1710 aa19.67■□□□□ 0.74
MBD1-204ENST00000347968 U2SURPO15042 1029 aaKnown RBP19.67■□□□□ 0.74
MBD1-204ENST00000347968 NUTM2DQ5VT03 806 aaPredicted RBP19.67■□□□□ 0.74
MBD1-204ENST00000347968 AP5Z1O43299 807 aa19.66■□□□□ 0.74
MBD1-204ENST00000347968 C16orf71Q8IYS4 520 aaPredicted RBP19.66■□□□□ 0.74
MBD1-204ENST00000347968 TMX1Q9H3N1 280 aa19.66■□□□□ 0.74
MBD1-204ENST00000347968 NEO1Q92859 1461 aa19.66■□□□□ 0.74
MBD1-204ENST00000347968 NPHP1O15259 732 aa19.66■□□□□ 0.74
MBD1-204ENST00000347968 MBD3O95983 291 aa19.66■□□□□ 0.74
MBD1-204ENST00000347968 KIAA1524Q8TCG1 905 aa19.66■□□□□ 0.74
MBD1-204ENST00000347968 DNAJC2Q99543 621 aaKnown RBP19.66■□□□□ 0.74
MBD1-204ENST00000347968 U2AF1L5P0DN76 240 aaPredicted RBP19.65■□□□□ 0.74
MBD1-204ENST00000347968 U2AF1Q01081 240 aaKnown RBP eCLIP19.65■□□□□ 0.74
MBD1-204ENST00000347968 CDCA8Q53HL2 280 aa19.65■□□□□ 0.74
MBD1-204ENST00000347968 WDR63Q8IWG1 891 aa19.65■□□□□ 0.74
MBD1-204ENST00000347968 SECISBP2LQ93073 1101 aaKnown RBP19.65■□□□□ 0.74
MBD1-204ENST00000347968 PPRC1Q5VV67 1664 aaKnown RBP19.65■□□□□ 0.74
MBD1-204ENST00000347968 ZNF592Q92610 1267 aa19.65■□□□□ 0.74
MBD1-204ENST00000347968 CCDC66A2RUB6 948 aa19.65■□□□□ 0.74
MBD1-204ENST00000347968 GABPB1Q06547 395 aaPredicted RBP19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms