RNA–Protein interactions for RNA: ENST00000344548.7

CDC42-202, Transcript of cell division cycle 42, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CDC42, Length 2,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-202ENST00000344548 EXOC6Q8TAG9 804 aa17.75■□□□□ 0.43
CDC42-202ENST00000344548 ZNF335Q9H4Z2 1342 aaPredicted RBP17.75■□□□□ 0.43
CDC42-202ENST00000344548 SULT6B1Q6IMI4 303 aa17.75■□□□□ 0.43
CDC42-202ENST00000344548 TSR2Q969E8 191 aaKnown RBP17.75■□□□□ 0.43
CDC42-202ENST00000344548 MST1RQ04912 1400 aa17.75■□□□□ 0.43
CDC42-202ENST00000344548 NCBP3Q53F19 620 aaKnown RBP17.74■□□□□ 0.43
CDC42-202ENST00000344548 THUMPD2Q9BTF0 503 aaKnown RBP17.74■□□□□ 0.43
CDC42-202ENST00000344548 SBNO1A3KN83 1393 aa17.74■□□□□ 0.43
CDC42-202ENST00000344548 XIRP1Q702N8 1843 aaKnown RBP17.73■□□□□ 0.43
CDC42-202ENST00000344548 AMPHP49418 695 aa17.73■□□□□ 0.43
CDC42-202ENST00000344548 USP54Q70EL1 1684 aa17.73■□□□□ 0.43
CDC42-202ENST00000344548 ATF3P18847 181 aa17.73■□□□□ 0.43
CDC42-202ENST00000344548 FLT4P35916 1363 aa17.73■□□□□ 0.43
CDC42-202ENST00000344548 RGPD1P0DJD0 1748 aa17.72■□□□□ 0.43
CDC42-202ENST00000344548 PNNQ9H307 717 aaKnown RBP17.72■□□□□ 0.43
CDC42-202ENST00000344548 HOXC9P31274 260 aa17.72■□□□□ 0.43
CDC42-202ENST00000344548 NFE2L2Q16236 605 aa17.72■□□□□ 0.43
CDC42-202ENST00000344548 KRT28Q7Z3Y7 464 aa17.72■□□□□ 0.43
CDC42-202ENST00000344548 FAM83GA6ND36 823 aa17.7■□□□□ 0.42
CDC42-202ENST00000344548 EYA1Q99502 592 aa17.7■□□□□ 0.42
CDC42-202ENST00000344548 FANCIQ9NVI1 1328 aa17.7■□□□□ 0.42
CDC42-202ENST00000344548 LMOD2Q6P5Q4 547 aa17.7■□□□□ 0.42
CDC42-202ENST00000344548 CRBNQ96SW2 442 aa17.69■□□□□ 0.42
CDC42-202ENST00000344548 NFAT5O94916 1531 aa17.69■□□□□ 0.42
CDC42-202ENST00000344548 TRPM3Q9HCF6 1732 aaPredicted RBP17.69■□□□□ 0.42
CDC42-202ENST00000344548 DCTN1Q14203 1278 aa17.69■□□□□ 0.42
CDC42-202ENST00000344548 LTV1Q96GA3 475 aaPredicted RBP17.68■□□□□ 0.42
CDC42-202ENST00000344548 DLG5Q8TDM6 1919 aa17.68■□□□□ 0.42
CDC42-202ENST00000344548 NCOA3Q9Y6Q9 1424 aa17.68■□□□□ 0.42
CDC42-202ENST00000344548 BCL2L13Q9BXK5 485 aa17.67■□□□□ 0.42
CDC42-202ENST00000344548 DCCP43146 1447 aa17.67■□□□□ 0.42
CDC42-202ENST00000344548 EXOSC9Q06265 439 aaKnown RBP17.67■□□□□ 0.42
CDC42-202ENST00000344548 CADPS2Q86UW7 1296 aa17.67■□□□□ 0.42
CDC42-202ENST00000344548 MYH16Q9H6N6 1097 aa17.67■□□□□ 0.42
CDC42-202ENST00000344548 LTN1O94822 1766 aa17.66■□□□□ 0.42
CDC42-202ENST00000344548 ZBTB7CA1YPR0 619 aa17.66■□□□□ 0.42
CDC42-202ENST00000344548 GCP02774 474 aa17.66■□□□□ 0.42
CDC42-202ENST00000344548 NEFMP07197 916 aa17.66■□□□□ 0.42
CDC42-202ENST00000344548 RARSP54136 660 aaKnown RBP17.66■□□□□ 0.42
CDC42-202ENST00000344548 MSH6P52701 1360 aa17.65■□□□□ 0.42
CDC42-202ENST00000344548 IGSF1Q8N6C5 1336 aa17.65■□□□□ 0.42
CDC42-202ENST00000344548 KIF1AQ12756 1690 aa17.64■□□□□ 0.42
CDC42-202ENST00000344548 LAS1LQ9Y4W2 734 aaKnown RBP17.64■□□□□ 0.41
CDC42-202ENST00000344548 IL16Q14005 1332 aa17.64■□□□□ 0.41
CDC42-202ENST00000344548 ARHGEF10O15013 1369 aa17.64■□□□□ 0.41
CDC42-202ENST00000344548 USHBP1Q8N6Y0 703 aa17.64■□□□□ 0.41
CDC42-202ENST00000344548 TNNQ9UQP3 1299 aa17.64■□□□□ 0.41
CDC42-202ENST00000344548 KDRP35968 1356 aa17.63■□□□□ 0.41
CDC42-202ENST00000344548 IP6K1Q92551 441 aa17.63■□□□□ 0.41
CDC42-202ENST00000344548 CCDC136Q96JN2 1154 aa17.63■□□□□ 0.41
CDC42-202ENST00000344548 KIF24Q5T7B8 1368 aa17.62■□□□□ 0.41
CDC42-202ENST00000344548 MTHFSDQ2M296 383 aaKnown RBP17.61■□□□□ 0.41
CDC42-202ENST00000344548 BRINP3Q76B58 766 aa17.61■□□□□ 0.41
CDC42-202ENST00000344548 ARHGEF25Q86VW2 580 aa17.61■□□□□ 0.41
CDC42-202ENST00000344548 SLIT3O75094 1523 aa17.61■□□□□ 0.41
CDC42-202ENST00000344548 USP19O94966 1318 aa17.61■□□□□ 0.41
CDC42-202ENST00000344548 ALS2Q96Q42 1657 aa17.61■□□□□ 0.41
CDC42-202ENST00000344548 MCM10Q7L590 875 aa17.61■□□□□ 0.41
CDC42-202ENST00000344548 KCNH5Q8NCM2 988 aa17.61■□□□□ 0.41
CDC42-202ENST00000344548 CABLES1Q8TDN4 633 aa17.61■□□□□ 0.41
CDC42-202ENST00000344548 AXIN2Q9Y2T1 843 aa17.61■□□□□ 0.41
CDC42-202ENST00000344548 MED1Q15648 1581 aaPredicted RBP17.6■□□□□ 0.41
CDC42-202ENST00000344548 ZNF853P0CG23 659 aa17.6■□□□□ 0.41
CDC42-202ENST00000344548 NBPF6Q5VWK0 638 aa17.6■□□□□ 0.41
CDC42-202ENST00000344548 FRAT1Q92837 279 aaPredicted RBP17.6■□□□□ 0.41
CDC42-202ENST00000344548 NBPF4Q96M43 638 aa17.6■□□□□ 0.41
CDC42-202ENST00000344548 LRRC59Q96AG4 307 aaKnown RBP17.59■□□□□ 0.41
CDC42-202ENST00000344548 ZC3H6P61129 1189 aaKnown RBP17.59■□□□□ 0.41
CDC42-202ENST00000344548 MBIPQ9NS73 344 aa17.59■□□□□ 0.41
CDC42-202ENST00000344548 TSPYL6Q8N831 410 aa17.58■□□□□ 0.4
CDC42-202ENST00000344548 PANK1Q8TE04 598 aa17.58■□□□□ 0.4
CDC42-202ENST00000344548 RTL1A6NKG5 1358 aa17.58■□□□□ 0.4
CDC42-202ENST00000344548 PXDNQ92626 1479 aa17.58■□□□□ 0.4
CDC42-202ENST00000344548 RGPD2P0DJD1 1756 aa17.58■□□□□ 0.4
CDC42-202ENST00000344548 SLAIN2Q9P270 581 aa17.58■□□□□ 0.4
CDC42-202ENST00000344548 NPHP3Q7Z494 1330 aa17.57■□□□□ 0.4
CDC42-202ENST00000344548 RLBP1P12271 317 aa17.57■□□□□ 0.4
CDC42-202ENST00000344548 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.57■□□□□ 0.4
CDC42-202ENST00000344548 SSH1Q8WYL5 1049 aa17.57■□□□□ 0.4
CDC42-202ENST00000344548 ELL2O00472 640 aaPredicted RBP17.56■□□□□ 0.4
CDC42-202ENST00000344548 TSHZ2Q9NRE2 1034 aa17.56■□□□□ 0.4
CDC42-202ENST00000344548 IFT57Q9NWB7 429 aa17.56■□□□□ 0.4
CDC42-202ENST00000344548 CFAP44Q96MT7 982 aa17.55■□□□□ 0.4
CDC42-202ENST00000344548 PHRF1Q9P1Y6 1649 aaKnown RBP17.55■□□□□ 0.4
CDC42-202ENST00000344548 SPATA31A3Q5VYP0 1347 aa17.54■□□□□ 0.4
CDC42-202ENST00000344548 KRT24Q2M2I5 525 aa17.54■□□□□ 0.4
CDC42-202ENST00000344548 GNAI1P63096 354 aa17.54■□□□□ 0.4
CDC42-202ENST00000344548 LMOD3Q0VAK6 560 aa17.54■□□□□ 0.4
CDC42-202ENST00000344548 C8orf58Q8NAV2 365 aa17.54■□□□□ 0.4
CDC42-202ENST00000344548 CLUAP1Q96AJ1 413 aa17.54■□□□□ 0.4
CDC42-202ENST00000344548 COG6Q9Y2V7 657 aa17.54■□□□□ 0.4
CDC42-202ENST00000344548 MIS18AQ9NYP9 233 aa17.53■□□□□ 0.4
CDC42-202ENST00000344548 RGPD5Q99666 1765 aa17.53■□□□□ 0.4
CDC42-202ENST00000344548 TNS3Q68CZ2 1445 aa17.53■□□□□ 0.4
CDC42-202ENST00000344548 VAMP4O75379 141 aa17.52■□□□□ 0.4
CDC42-202ENST00000344548 SMC4Q9NTJ3 1288 aa17.52■□□□□ 0.4
CDC42-202ENST00000344548 CRB1P82279 1406 aa17.52■□□□□ 0.4
CDC42-202ENST00000344548 TCERG1O14776 1098 aaKnown RBP17.52■□□□□ 0.4
CDC42-202ENST00000344548 CANXP27824 592 aaKnown RBP17.52■□□□□ 0.4
CDC42-202ENST00000344548 PELP1Q8IZL8 1130 aaKnown RBP17.52■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms