RNA–Protein interactions for RNA: ENST00000344140.5

CACNB1-201, Transcript of calcium voltage-gated channel auxiliary subunit beta 1, humanhuman

TSL 1 (best) BASIC

Gene CACNB1, Length 1,889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB1-201ENST00000344140 RTL1A6NKG5 1358 aa28.93■■■□□ 2.22
CACNB1-201ENST00000344140 PIP4K2BP78356 416 aa28.93■■■□□ 2.22
CACNB1-201ENST00000344140 ROBO1Q9Y6N7 1651 aa28.92■■■□□ 2.22
CACNB1-201ENST00000344140 NFAT5O94916 1531 aa28.92■■■□□ 2.22
CACNB1-201ENST00000344140 PRKAR2BP31323 418 aa28.92■■■□□ 2.22
CACNB1-201ENST00000344140 NEUROD2Q15784 382 aa28.92■■■□□ 2.22
CACNB1-201ENST00000344140 RRP7AQ9Y3A4 280 aaKnown RBP28.92■■■□□ 2.22
CACNB1-201ENST00000344140 USP19O94966 1318 aa28.92■■■□□ 2.22
CACNB1-201ENST00000344140 LMOD2Q6P5Q4 547 aa28.91■■■□□ 2.22
CACNB1-201ENST00000344140 SLIT3O75094 1523 aa28.91■■■□□ 2.22
CACNB1-201ENST00000344140 HMOX1P09601 288 aa28.9■■■□□ 2.22
CACNB1-201ENST00000344140 TMPOP42166 694 aaKnown RBP28.9■■■□□ 2.22
CACNB1-201ENST00000344140 SLFN5Q08AF3 891 aa28.9■■■□□ 2.22
CACNB1-201ENST00000344140 E9PSI1 815 aa28.89■■■□□ 2.22
CACNB1-201ENST00000344140 HOXC9P31274 260 aa28.89■■■□□ 2.22
CACNB1-201ENST00000344140 ALS2Q96Q42 1657 aa28.89■■■□□ 2.22
CACNB1-201ENST00000344140 WDR63Q8IWG1 891 aa28.89■■■□□ 2.21
CACNB1-201ENST00000344140 PXDNQ92626 1479 aa28.88■■■□□ 2.21
CACNB1-201ENST00000344140 GCP02774 474 aa28.87■■■□□ 2.21
CACNB1-201ENST00000344140 DUSP27Q5VZP5 1158 aa28.87■■■□□ 2.21
CACNB1-201ENST00000344140 TRMT2AQ8IZ69 625 aaKnown RBP28.87■■■□□ 2.21
CACNB1-201ENST00000344140 DDX17Q92841 729 aaKnown RBP28.87■■■□□ 2.21
CACNB1-201ENST00000344140 ARHGEF10O15013 1369 aa28.86■■■□□ 2.21
CACNB1-201ENST00000344140 TNS3Q68CZ2 1445 aa28.86■■■□□ 2.21
CACNB1-201ENST00000344140 IP6K1Q92551 441 aa28.85■■■□□ 2.21
CACNB1-201ENST00000344140 RGPD1P0DJD0 1748 aa28.84■■■□□ 2.21
CACNB1-201ENST00000344140 NHSL1Q5SYE7 1610 aa28.84■■■□□ 2.21
CACNB1-201ENST00000344140 FKBP8Q14318 412 aa28.83■■■□□ 2.21
CACNB1-201ENST00000344140 SULT6B1Q6IMI4 303 aa28.83■■■□□ 2.21
CACNB1-201ENST00000344140 RCAN3Q9UKA8 241 aa28.83■■■□□ 2.21
CACNB1-201ENST00000344140 PHRF1Q9P1Y6 1649 aaKnown RBP28.83■■■□□ 2.21
CACNB1-201ENST00000344140 SPATA31A3Q5VYP0 1347 aa28.82■■■□□ 2.2
CACNB1-201ENST00000344140 LTN1O94822 1766 aa28.82■■■□□ 2.2
CACNB1-201ENST00000344140 RIPK4P57078 832 aa28.82■■■□□ 2.2
CACNB1-201ENST00000344140 NFE2L2Q16236 605 aa28.81■■■□□ 2.2
CACNB1-201ENST00000344140 ARHGEF25Q86VW2 580 aa28.81■■■□□ 2.2
CACNB1-201ENST00000344140 RNF123Q5XPI4 1314 aa28.81■■■□□ 2.2
CACNB1-201ENST00000344140 PHACTR3Q96KR7 559 aa28.8■■■□□ 2.2
CACNB1-201ENST00000344140 SPINK5Q9NQ38 1064 aaPredicted RBP28.8■■■□□ 2.2
CACNB1-201ENST00000344140 IGSF1Q8N6C5 1336 aa28.8■■■□□ 2.2
CACNB1-201ENST00000344140 TRIM35Q9UPQ4 493 aa28.79■■■□□ 2.2
CACNB1-201ENST00000344140 SOS2Q07890 1332 aaPredicted RBP28.79■■■□□ 2.2
CACNB1-201ENST00000344140 AHDC1Q5TGY3 1603 aaPredicted RBP28.78■■■□□ 2.2
CACNB1-201ENST00000344140 AEBP1Q8IUX7 1158 aa28.78■■■□□ 2.2
CACNB1-201ENST00000344140 KDRP35968 1356 aa28.78■■■□□ 2.2
CACNB1-201ENST00000344140 EYA1Q99502 592 aa28.78■■■□□ 2.2
CACNB1-201ENST00000344140 MED1Q15648 1581 aaPredicted RBP28.77■■■□□ 2.2
CACNB1-201ENST00000344140 IL16Q14005 1332 aa28.75■■■□□ 2.19
CACNB1-201ENST00000344140 PHLPP1O60346 1717 aa28.74■■■□□ 2.19
CACNB1-201ENST00000344140 MYH16Q9H6N6 1097 aa28.74■■■□□ 2.19
CACNB1-201ENST00000344140 LMOD3Q0VAK6 560 aa28.74■■■□□ 2.19
CACNB1-201ENST00000344140 ZBTB7CA1YPR0 619 aa28.73■■■□□ 2.19
CACNB1-201ENST00000344140 PLEKHG5O94827 1062 aa28.73■■■□□ 2.19
CACNB1-201ENST00000344140 ERICH6BQ5W0A0 696 aa28.72■■■□□ 2.19
CACNB1-201ENST00000344140 LTV1Q96GA3 475 aaPredicted RBP28.72■■■□□ 2.19
CACNB1-201ENST00000344140 CALD1Q05682 793 aaKnown RBP28.7■■■□□ 2.19
CACNB1-201ENST00000344140 RRP1P56182 461 aaKnown RBP28.67■■■□□ 2.18
CACNB1-201ENST00000344140 ZC3H6P61129 1189 aaKnown RBP28.67■■■□□ 2.18
CACNB1-201ENST00000344140 LRRC59Q96AG4 307 aaKnown RBP28.67■■■□□ 2.18
CACNB1-201ENST00000344140 COL16A1Q07092 1604 aaPredicted RBP28.66■■■□□ 2.18
CACNB1-201ENST00000344140 IRX6P78412 446 aaPredicted RBP28.65■■■□□ 2.18
CACNB1-201ENST00000344140 CABLES1Q8TDN4 633 aa28.65■■■□□ 2.18
CACNB1-201ENST00000344140 CPDO75976 1380 aa28.65■■■□□ 2.18
CACNB1-201ENST00000344140 CRYBG1Q9Y4K1 1723 aa28.64■■■□□ 2.18
CACNB1-201ENST00000344140 ABCC6O95255 1503 aa28.64■■■□□ 2.18
CACNB1-201ENST00000344140 ANKRD24Q8TF21 1146 aa28.63■■■□□ 2.17
CACNB1-201ENST00000344140 GAS2L2Q8NHY3 880 aa28.62■■■□□ 2.17
CACNB1-201ENST00000344140 NBPF6Q5VWK0 638 aa28.61■■■□□ 2.17
CACNB1-201ENST00000344140 NBPF4Q96M43 638 aa28.61■■■□□ 2.17
CACNB1-201ENST00000344140 FANCIQ9NVI1 1328 aa28.61■■■□□ 2.17
CACNB1-201ENST00000344140 AXIN2Q9Y2T1 843 aa28.61■■■□□ 2.17
CACNB1-201ENST00000344140 DLG5Q8TDM6 1919 aa28.6■■■□□ 2.17
CACNB1-201ENST00000344140 CT47B1P0C2W7 299 aaPredicted RBP28.59■■■□□ 2.17
CACNB1-201ENST00000344140 MTHFSDQ2M296 383 aaKnown RBP28.58■■■□□ 2.17
CACNB1-201ENST00000344140 IFT57Q9NWB7 429 aa28.58■■■□□ 2.17
CACNB1-201ENST00000344140 NCAPD2Q15021 1401 aa28.58■■■□□ 2.17
CACNB1-201ENST00000344140 ERBB3P21860 1342 aa28.58■■■□□ 2.16
CACNB1-201ENST00000344140 HSPA1LP34931 641 aa28.57■■■□□ 2.16
CACNB1-201ENST00000344140 KIAA0232Q92628 1395 aa28.57■■■□□ 2.16
CACNB1-201ENST00000344140 GNAI1P63096 354 aa28.57■■■□□ 2.16
CACNB1-201ENST00000344140 USHBP1Q8N6Y0 703 aa28.57■■■□□ 2.16
CACNB1-201ENST00000344140 FBXO41Q8TF61 875 aa28.57■■■□□ 2.16
CACNB1-201ENST00000344140 TSR2Q969E8 191 aaKnown RBP28.56■■■□□ 2.16
CACNB1-201ENST00000344140 GOLGA6L2Q8N9W4 650 aaPredicted RBP28.55■■■□□ 2.16
CACNB1-201ENST00000344140 THUMPD2Q9BTF0 503 aaKnown RBP28.55■■■□□ 2.16
CACNB1-201ENST00000344140 COL18A1P39060 1754 aa28.55■■■□□ 2.16
CACNB1-201ENST00000344140 HTATSF1O43719 755 aaKnown RBP28.54■■■□□ 2.16
CACNB1-201ENST00000344140 HAP1P54257 671 aaPredicted RBP28.54■■■□□ 2.16
CACNB1-201ENST00000344140 FAM83GA6ND36 823 aa28.53■■■□□ 2.16
CACNB1-201ENST00000344140 ZNF853P0CG23 659 aa28.53■■■□□ 2.16
CACNB1-201ENST00000344140 RTF1Q92541 710 aaKnown RBP28.53■■■□□ 2.16
CACNB1-201ENST00000344140 CFAP44Q96MT7 982 aa28.53■■■□□ 2.16
CACNB1-201ENST00000344140 CAMTA1Q9Y6Y1 1673 aa28.53■■■□□ 2.16
CACNB1-201ENST00000344140 COL22A1Q8NFW1 1626 aaPredicted RBP28.51■■■□□ 2.15
CACNB1-201ENST00000344140 CHRNA2Q15822 529 aa28.51■■■□□ 2.15
CACNB1-201ENST00000344140 PRDM11Q9NQV5 511 aa28.51■■■□□ 2.15
CACNB1-201ENST00000344140 LAS1LQ9Y4W2 734 aaKnown RBP28.51■■■□□ 2.15
CACNB1-201ENST00000344140 RGPD5Q99666 1765 aa28.5■■■□□ 2.15
CACNB1-201ENST00000344140 JCADQ9P266 1359 aa28.5■■■□□ 2.15
CACNB1-201ENST00000344140 EXOSC9Q06265 439 aaKnown RBP28.5■■■□□ 2.15
Retrieved 100 of 20,778 RNA–protein pairs in 193.5 ms