RNA–Protein interactions for RNA: ENST00000340647.8

BRCC3-202, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS P2 TSL 2 BASIC

Gene BRCC3, Length 1,101 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-202ENST00000340647 EDC4Q6P2E9 1401 aaKnown RBP24.1■■□□□ 1.45
BRCC3-202ENST00000340647 CLSPNQ9HAW4 1339 aa24.1■■□□□ 1.45
BRCC3-202ENST00000340647 SF3B2Q13435 895 aaKnown RBP24.09■■□□□ 1.45
BRCC3-202ENST00000340647 SOX12O15370 315 aa24.08■■□□□ 1.45
BRCC3-202ENST00000340647 PEAK1Q9H792 1746 aa24.07■■□□□ 1.44
BRCC3-202ENST00000340647 KCNH5Q8NCM2 988 aa24.07■■□□□ 1.44
BRCC3-202ENST00000340647 OVOS2A0A0J9YW53 1432 aa24.07■■□□□ 1.44
BRCC3-202ENST00000340647 OVOS2Q6IE36 1432 aa24.07■■□□□ 1.44
BRCC3-202ENST00000340647 LRRC37A3O60309 1634 aa24.06■■□□□ 1.44
BRCC3-202ENST00000340647 TIMELESSQ9UNS1 1208 aa24.06■■□□□ 1.44
BRCC3-202ENST00000340647 THRAP3Q9Y2W1 955 aaKnown RBP24.06■■□□□ 1.44
BRCC3-202ENST00000340647 SBF2Q86WG5 1849 aa24.05■■□□□ 1.44
BRCC3-202ENST00000340647 ABCC6O95255 1503 aa24.05■■□□□ 1.44
BRCC3-202ENST00000340647 LRP5O75197 1615 aa24.04■■□□□ 1.44
BRCC3-202ENST00000340647 HDGFL2Q7Z4V5 671 aaPredicted RBP24.04■■□□□ 1.44
BRCC3-202ENST00000340647 WDR17Q8IZU2 1322 aa24.04■■□□□ 1.44
BRCC3-202ENST00000340647 MYOM1P52179 1685 aa24.03■■□□□ 1.44
BRCC3-202ENST00000340647 TERF2IPQ9NYB0 399 aa24.03■■□□□ 1.44
BRCC3-202ENST00000340647 NINLQ9Y2I6 1382 aa24.02■■□□□ 1.44
BRCC3-202ENST00000340647 DISP2A7MBM2 1401 aa24.01■■□□□ 1.43
BRCC3-202ENST00000340647 PSDA5PKW4 1024 aaPredicted RBP24■■□□□ 1.43
BRCC3-202ENST00000340647 EN1Q05925 392 aaPredicted RBP24■■□□□ 1.43
BRCC3-202ENST00000340647 FAM196AQ6ZSG2 479 aa24■■□□□ 1.43
BRCC3-202ENST00000340647 TOM1L2Q6ZVM7 507 aa23.99■■□□□ 1.43
BRCC3-202ENST00000340647 TRIM37O94972 964 aa23.98■■□□□ 1.43
BRCC3-202ENST00000340647 BAG6P46379 1132 aa23.98■■□□□ 1.43
BRCC3-202ENST00000340647 ANKRD36BQ8N2N9 1353 aa23.98■■□□□ 1.43
BRCC3-202ENST00000340647 CARD10Q9BWT7 1032 aa23.97■■□□□ 1.43
BRCC3-202ENST00000340647 SLC24A1O60721 1099 aa23.96■■□□□ 1.43
BRCC3-202ENST00000340647 FBLN1P23142 703 aa23.96■■□□□ 1.43
BRCC3-202ENST00000340647 TMF1P82094 1093 aa23.96■■□□□ 1.43
BRCC3-202ENST00000340647 PDE3BQ13370 1112 aa23.96■■□□□ 1.43
BRCC3-202ENST00000340647 RREB1Q92766 1687 aa23.95■■□□□ 1.42
BRCC3-202ENST00000340647 CAMKK2Q96RR4 588 aa23.94■■□□□ 1.42
BRCC3-202ENST00000340647 RGPD2P0DJD1 1756 aa23.93■■□□□ 1.42
BRCC3-202ENST00000340647 ERBB3P21860 1342 aa23.93■■□□□ 1.42
BRCC3-202ENST00000340647 EZH2Q15910 746 aaKnown RBP23.93■■□□□ 1.42
BRCC3-202ENST00000340647 KIF20BQ96Q89 1820 aa23.92■■□□□ 1.42
BRCC3-202ENST00000340647 NUP188Q5SRE5 1749 aa23.91■■□□□ 1.42
BRCC3-202ENST00000340647 FYB1O15117 783 aa23.91■■□□□ 1.42
BRCC3-202ENST00000340647 PTF1AQ7RTS3 328 aa23.91■■□□□ 1.42
BRCC3-202ENST00000340647 MARCH10Q8NA82 808 aaPredicted RBP23.91■■□□□ 1.42
BRCC3-202ENST00000340647 DDB1Q16531 1140 aa23.9■■□□□ 1.42
BRCC3-202ENST00000340647 CARD14Q9BXL6 1004 aa23.9■■□□□ 1.42
BRCC3-202ENST00000340647 CSB-PGBD3P0DP91 1061 aa23.89■■□□□ 1.41
BRCC3-202ENST00000340647 OVOS2A0A0G2JMS6 1433 aa23.88■■□□□ 1.41
BRCC3-202ENST00000340647 IP6K1Q92551 441 aa23.88■■□□□ 1.41
BRCC3-202ENST00000340647 CCDC7Q96M83 1385 aa23.88■■□□□ 1.41
BRCC3-202ENST00000340647 MAP3K19Q56UN5 1328 aa23.87■■□□□ 1.41
BRCC3-202ENST00000340647 APBA3O96018 575 aa23.87■■□□□ 1.41
BRCC3-202ENST00000340647 R3HDM1Q15032 1099 aaKnown RBP23.87■■□□□ 1.41
BRCC3-202ENST00000340647 CCER1Q8TC90 406 aaPredicted RBP23.87■■□□□ 1.41
BRCC3-202ENST00000340647 ANKRD24Q8TF21 1146 aa23.87■■□□□ 1.41
BRCC3-202ENST00000340647 FAM208AQ9UK61 1670 aaKnown RBP23.86■■□□□ 1.41
BRCC3-202ENST00000340647 BCL9O00512 1426 aa23.86■■□□□ 1.41
BRCC3-202ENST00000340647 CDCA7Q9BWT1 371 aaPredicted RBP23.86■■□□□ 1.41
BRCC3-202ENST00000340647 GGNBP2Q9H3C7 697 aa23.86■■□□□ 1.41
BRCC3-202ENST00000340647 COG3Q96JB2 828 aa23.85■■□□□ 1.41
BRCC3-202ENST00000340647 RGPD3A6NKT7 1758 aaPredicted RBP23.84■■□□□ 1.41
BRCC3-202ENST00000340647 RGPD4Q7Z3J3 1758 aa23.84■■□□□ 1.41
BRCC3-202ENST00000340647 TNS2Q63HR2 1409 aa23.84■■□□□ 1.41
BRCC3-202ENST00000340647 HOXC9P31274 260 aa23.82■■□□□ 1.4
BRCC3-202ENST00000340647 CDCA8Q53HL2 280 aa23.82■■□□□ 1.4
BRCC3-202ENST00000340647 NLRP2Q9NX02 1062 aa23.82■■□□□ 1.4
BRCC3-202ENST00000340647 SHANK3Q9BYB0 1731 aa23.81■■□□□ 1.4
BRCC3-202ENST00000340647 PARD3Q8TEW0 1356 aa23.8■■□□□ 1.4
BRCC3-202ENST00000340647 HSPA5P11021 654 aaKnown RBP23.8■■□□□ 1.4
BRCC3-202ENST00000340647 RRS1Q15050 365 aaKnown RBP23.8■■□□□ 1.4
BRCC3-202ENST00000340647 NSD3Q9BZ95 1437 aa23.79■■□□□ 1.4
BRCC3-202ENST00000340647 EXOC5O00471 708 aa23.79■■□□□ 1.4
BRCC3-202ENST00000340647 LTV1Q96GA3 475 aaPredicted RBP23.78■■□□□ 1.4
BRCC3-202ENST00000340647 NHSQ6T4R5 1651 aa23.78■■□□□ 1.4
BRCC3-202ENST00000340647 C11orf95C9JLR9 678 aaPredicted RBP23.77■■□□□ 1.4
BRCC3-202ENST00000340647 IL2RBP14784 551 aa23.77■■□□□ 1.4
BRCC3-202ENST00000340647 PROM2Q8N271 834 aa23.77■■□□□ 1.4
BRCC3-202ENST00000340647 BCL11BQ9C0K0 894 aaPredicted RBP23.77■■□□□ 1.4
BRCC3-202ENST00000340647 ANKRD26Q9UPS8 1709 aa23.76■■□□□ 1.39
BRCC3-202ENST00000340647 MAP2P11137 1827 aaKnown RBP23.76■■□□□ 1.39
BRCC3-202ENST00000340647 PLSCR1O15162 318 aa23.75■■□□□ 1.39
BRCC3-202ENST00000340647 KCNQ2O43526 872 aa23.75■■□□□ 1.39
BRCC3-202ENST00000340647 EIF4G2P78344 907 aaKnown RBP eCLIP23.74■■□□□ 1.39
BRCC3-202ENST00000340647 RTL1A6NKG5 1358 aa23.74■■□□□ 1.39
BRCC3-202ENST00000340647 KAT6BQ8WYB5 2073 aa23.74■■□□□ 1.39
BRCC3-202ENST00000340647 AMPHP49418 695 aa23.73■■□□□ 1.39
BRCC3-202ENST00000340647 BTAF1O14981 1849 aa23.73■■□□□ 1.39
BRCC3-202ENST00000340647 MEGF6O75095 1541 aa23.72■■□□□ 1.39
BRCC3-202ENST00000340647 HSP90AB2PQ58FF8 381 aa23.71■■□□□ 1.39
BRCC3-202ENST00000340647 NBPF6Q5VWK0 638 aa23.71■■□□□ 1.39
BRCC3-202ENST00000340647 NBPF4Q96M43 638 aa23.71■■□□□ 1.39
BRCC3-202ENST00000340647 INSRP06213 1382 aa23.68■■□□□ 1.38
BRCC3-202ENST00000340647 EMILIN1Q9Y6C2 1016 aa23.68■■□□□ 1.38
BRCC3-202ENST00000340647 ACSBG1Q96GR2 724 aa23.67■■□□□ 1.38
BRCC3-202ENST00000340647 ANO8Q9HCE9 1232 aaPredicted RBP23.67■■□□□ 1.38
BRCC3-202ENST00000340647 USHBP1Q8N6Y0 703 aa23.66■■□□□ 1.38
BRCC3-202ENST00000340647 FLT4P35916 1363 aa23.65■■□□□ 1.38
BRCC3-202ENST00000340647 KIF24Q5T7B8 1368 aa23.65■■□□□ 1.38
BRCC3-202ENST00000340647 CASZ1Q86V15 1759 aa23.65■■□□□ 1.38
BRCC3-202ENST00000340647 POLR3GLQ9BT43 218 aa23.65■■□□□ 1.38
BRCC3-202ENST00000340647 DOT1LQ8TEK3 1739 aa23.64■■□□□ 1.38
BRCC3-202ENST00000340647 PANK3Q9H999 370 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms