RNA–Protein interactions for RNA: ENST00000339754.10

NECAP1-201, Transcript of NECAP endocytosis associated 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene NECAP1, Length 2,593 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-201ENST00000339754 DEPDC5O75140 1603 aa11.55□□□□□ -0.56
NECAP1-201ENST00000339754 PPP4R3BQ5MIZ7 849 aa11.55□□□□□ -0.56
NECAP1-201ENST00000339754 CFAP70Q5T0N1 1121 aa11.55□□□□□ -0.56
NECAP1-201ENST00000339754 GCC1Q96CN9 775 aa11.55□□□□□ -0.56
NECAP1-201ENST00000339754 TRIM35Q9UPQ4 493 aa11.55□□□□□ -0.56
NECAP1-201ENST00000339754 HMGN5P82970 282 aaKnown RBP11.55□□□□□ -0.56
NECAP1-201ENST00000339754 CHAMP1Q96JM3 812 aa11.55□□□□□ -0.56
NECAP1-201ENST00000339754 IPO8O15397 1037 aaKnown RBP11.54□□□□□ -0.56
NECAP1-201ENST00000339754 CDC45O75419 566 aa11.54□□□□□ -0.56
NECAP1-201ENST00000339754 RAPGEF3O95398 923 aa11.54□□□□□ -0.56
NECAP1-201ENST00000339754 U2AF1L5P0DN76 240 aaPredicted RBP11.54□□□□□ -0.56
NECAP1-201ENST00000339754 U2AF1Q01081 240 aaKnown RBP eCLIP11.54□□□□□ -0.56
NECAP1-201ENST00000339754 ZGPATQ8N5A5 531 aaKnown RBP11.54□□□□□ -0.56
NECAP1-201ENST00000339754 CFAP53Q96M91 514 aa11.54□□□□□ -0.56
NECAP1-201ENST00000339754 PTPRTO14522 1441 aa11.54□□□□□ -0.56
NECAP1-201ENST00000339754 POGZQ7Z3K3 1410 aa11.54□□□□□ -0.56
NECAP1-201ENST00000339754 TRPM2O94759 1503 aa11.54□□□□□ -0.56
NECAP1-201ENST00000339754 RNF214Q8ND24 703 aa11.54□□□□□ -0.56
NECAP1-201ENST00000339754 ZBTB7BO15156 539 aaPredicted RBP11.53□□□□□ -0.56
NECAP1-201ENST00000339754 LETM1O95202 739 aaPredicted RBP11.53□□□□□ -0.56
NECAP1-201ENST00000339754 USP26Q9BXU7 913 aa11.53□□□□□ -0.56
NECAP1-201ENST00000339754 SLC12A5Q9H2X9 1139 aa11.53□□□□□ -0.56
NECAP1-201ENST00000339754 PLEKHF1Q96S99 279 aa11.53□□□□□ -0.56
NECAP1-201ENST00000339754 CLTCL1P53675 1640 aa11.53□□□□□ -0.56
NECAP1-201ENST00000339754 GSPT1P15170 499 aaKnown RBP11.52□□□□□ -0.56
NECAP1-201ENST00000339754 TMPOP42166 694 aaKnown RBP11.52□□□□□ -0.56
NECAP1-201ENST00000339754 NOLC1Q14978 699 aaKnown RBP eCLIP11.52□□□□□ -0.56
NECAP1-201ENST00000339754 SIRT2Q8IXJ6 389 aa11.52□□□□□ -0.56
NECAP1-201ENST00000339754 PIBF1Q8WXW3 757 aa11.52□□□□□ -0.56
NECAP1-201ENST00000339754 ABCC11Q96J66 1382 aa11.52□□□□□ -0.57
NECAP1-201ENST00000339754 PTMAP06454 111 aaKnown RBP11.52□□□□□ -0.57
NECAP1-201ENST00000339754 DNTTIP2Q5QJE6 756 aaKnown RBP11.52□□□□□ -0.57
NECAP1-201ENST00000339754 SBNO2Q9Y2G9 1366 aa11.52□□□□□ -0.57
NECAP1-201ENST00000339754 TET3O43151 1660 aa11.51□□□□□ -0.57
NECAP1-201ENST00000339754 GTF2E1P29083 439 aaPredicted RBP11.51□□□□□ -0.57
NECAP1-201ENST00000339754 BBXQ8WY36 941 aaPredicted RBP11.51□□□□□ -0.57
NECAP1-201ENST00000339754 VWDEQ8N2E2 1590 aa11.51□□□□□ -0.57
NECAP1-201ENST00000339754 IL16Q14005 1332 aa11.51□□□□□ -0.57
NECAP1-201ENST00000339754 RIMBP3CA6NJZ7 1639 aa11.51□□□□□ -0.57
NECAP1-201ENST00000339754 RIMBP3BA6NNM3 1639 aa11.51□□□□□ -0.57
NECAP1-201ENST00000339754 MROH1Q8NDA8 1641 aa11.51□□□□□ -0.57
NECAP1-201ENST00000339754 RIMBP3Q9UFD9 1639 aa11.51□□□□□ -0.57
NECAP1-201ENST00000339754 MED14O60244 1454 aa11.51□□□□□ -0.57
NECAP1-201ENST00000339754 ZBTB7CA1YPR0 619 aa11.51□□□□□ -0.57
NECAP1-201ENST00000339754 GGT6Q6P531 493 aa11.51□□□□□ -0.57
NECAP1-201ENST00000339754 ALDH1L2Q3SY69 923 aa11.5□□□□□ -0.57
NECAP1-201ENST00000339754 ZNF830Q96NB3 372 aaPredicted RBP11.5□□□□□ -0.57
NECAP1-201ENST00000339754 PPRC1Q5VV67 1664 aaKnown RBP11.5□□□□□ -0.57
NECAP1-201ENST00000339754 FAM177BA6PVY3 158 aa11.5□□□□□ -0.57
NECAP1-201ENST00000339754 MBD3O95983 291 aa11.5□□□□□ -0.57
NECAP1-201ENST00000339754 TSPY26PQ9H489 355 aa11.5□□□□□ -0.57
NECAP1-201ENST00000339754 C1orf115Q9H7X2 142 aa11.5□□□□□ -0.57
NECAP1-201ENST00000339754 KIF3AQ9Y496 699 aa11.5□□□□□ -0.57
NECAP1-201ENST00000339754 MLH3Q9UHC1 1453 aa11.5□□□□□ -0.57
NECAP1-201ENST00000339754 REREQ9P2R6 1566 aa11.5□□□□□ -0.57
NECAP1-201ENST00000339754 PLEKHM2Q8IWE5 1019 aa11.49□□□□□ -0.57
NECAP1-201ENST00000339754 BCL2L12Q9HB09 334 aa11.49□□□□□ -0.57
NECAP1-201ENST00000339754 SPTLC3Q9NUV7 552 aa11.49□□□□□ -0.57
NECAP1-201ENST00000339754 ADGRF5Q8IZF2 1346 aa11.49□□□□□ -0.57
NECAP1-201ENST00000339754 MYO3AQ8NEV4 1616 aa11.49□□□□□ -0.57
NECAP1-201ENST00000339754 NEO1Q92859 1461 aa11.49□□□□□ -0.57
NECAP1-201ENST00000339754 BRPF1P55201 1214 aaPredicted RBP11.49□□□□□ -0.57
NECAP1-201ENST00000339754 MPNDQ8N594 471 aa11.49□□□□□ -0.57
NECAP1-201ENST00000339754 ABCA6Q8N139 1617 aa11.48□□□□□ -0.57
NECAP1-201ENST00000339754 USP32Q8NFA0 1604 aa11.48□□□□□ -0.57
NECAP1-201ENST00000339754 HECW2Q9P2P5 1572 aa11.48□□□□□ -0.57
NECAP1-201ENST00000339754 C17orf53Q8N3J3 647 aaPredicted RBP11.48□□□□□ -0.57
NECAP1-201ENST00000339754 HOXD11P31277 338 aaPredicted RBP11.48□□□□□ -0.57
NECAP1-201ENST00000339754 FKBP5Q13451 457 aaPredicted RBP11.48□□□□□ -0.57
NECAP1-201ENST00000339754 MAP3K4Q9Y6R4 1608 aa11.48□□□□□ -0.57
NECAP1-201ENST00000339754 FRMPD1Q5SYB0 1578 aa11.48□□□□□ -0.57
NECAP1-201ENST00000339754 UGGT1Q9NYU2 1555 aa11.48□□□□□ -0.57
NECAP1-201ENST00000339754 SPDYE4A6NLX3 237 aa11.47□□□□□ -0.57
NECAP1-201ENST00000339754 PDE4CQ08493 712 aa11.47□□□□□ -0.57
NECAP1-201ENST00000339754 FAM69CQ0P6D2 419 aa11.47□□□□□ -0.57
NECAP1-201ENST00000339754 TMEM51Q9NW97 253 aa11.47□□□□□ -0.57
NECAP1-201ENST00000339754 ST18O60284 1047 aa11.47□□□□□ -0.57
NECAP1-201ENST00000339754 TTC12Q9H892 705 aaPredicted RBP11.47□□□□□ -0.57
NECAP1-201ENST00000339754 PIK3R4Q99570 1358 aa11.46□□□□□ -0.57
NECAP1-201ENST00000339754 UVSSAQ2YD98 709 aa11.46□□□□□ -0.57
NECAP1-201ENST00000339754 TTC22Q5TAA0 569 aa11.46□□□□□ -0.57
NECAP1-201ENST00000339754 FOXD4L5Q5VV16 416 aaPredicted RBP11.46□□□□□ -0.57
NECAP1-201ENST00000339754 PDCL2Q8N4E4 241 aa11.46□□□□□ -0.57
NECAP1-201ENST00000339754 FOXD4L4Q8WXT5 416 aaPredicted RBP11.46□□□□□ -0.57
NECAP1-201ENST00000339754 CFAP44Q96MT7 982 aa11.46□□□□□ -0.57
NECAP1-201ENST00000339754 MYOM2P54296 1465 aa11.46□□□□□ -0.58
NECAP1-201ENST00000339754 ANKRD7Q92527 254 aa11.46□□□□□ -0.58
NECAP1-201ENST00000339754 EFCAB6Q5THR3 1501 aa11.45□□□□□ -0.58
NECAP1-201ENST00000339754 BRD1O95696 1058 aa11.45□□□□□ -0.58
NECAP1-201ENST00000339754 CHMP4BQ9H444 224 aaKnown RBP11.45□□□□□ -0.58
NECAP1-201ENST00000339754 NEURL4Q96JN8 1562 aa11.45□□□□□ -0.58
NECAP1-201ENST00000339754 DCAF8L1A6NGE4 600 aa11.45□□□□□ -0.58
NECAP1-201ENST00000339754 ARHGAP45Q92619 1136 aa11.45□□□□□ -0.58
NECAP1-201ENST00000339754 INTS3Q68E01 1043 aaKnown RBP11.44□□□□□ -0.58
NECAP1-201ENST00000339754 C16orf71Q8IYS4 520 aaPredicted RBP11.44□□□□□ -0.58
NECAP1-201ENST00000339754 MRPL50Q8N5N7 158 aaKnown RBP11.44□□□□□ -0.58
NECAP1-201ENST00000339754 U2SURPO15042 1029 aaKnown RBP11.44□□□□□ -0.58
NECAP1-201ENST00000339754 IGSF3O75054 1194 aa11.44□□□□□ -0.58
NECAP1-201ENST00000339754 CHGAP10645 457 aaKnown RBP11.44□□□□□ -0.58
NECAP1-201ENST00000339754 U2AF2P26368 475 aaKnown RBP eCLIP11.44□□□□□ -0.583e-6■■■■□ 23.7
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms