RNA–Protein interactions for RNA: ENST00000337554.7

TSPO-202, Transcript of translocator protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TSPO, Length 881 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPO-202ENST00000337554 C14orf93Q9H972 538 aaKnown RBP23.55■■□□□ 1.36
TSPO-202ENST00000337554 COL24A1Q17RW2 1714 aa23.54■■□□□ 1.36
TSPO-202ENST00000337554 HIRIP3Q9BW71 556 aaPredicted RBP23.54■■□□□ 1.36
TSPO-202ENST00000337554 TULP4Q9NRJ4 1543 aa23.54■■□□□ 1.36
TSPO-202ENST00000337554 CRB1P82279 1406 aa23.53■■□□□ 1.36
TSPO-202ENST00000337554 ZNF827Q17R98 1081 aa23.53■■□□□ 1.36
TSPO-202ENST00000337554 ZNF526Q8TF50 670 aaPredicted RBP23.52■■□□□ 1.36
TSPO-202ENST00000337554 APLP1P51693 650 aa23.51■■□□□ 1.35
TSPO-202ENST00000337554 KIF3CO14782 793 aa23.5■■□□□ 1.35
TSPO-202ENST00000337554 CFAP70Q5T0N1 1121 aa23.49■■□□□ 1.35
TSPO-202ENST00000337554 TNS4Q8IZW8 715 aa23.47■■□□□ 1.35
TSPO-202ENST00000337554 POGKQ9P215 609 aa23.47■■□□□ 1.35
TSPO-202ENST00000337554 USP19O94966 1318 aa23.46■■□□□ 1.35
TSPO-202ENST00000337554 WASLO00401 505 aaPredicted RBP23.45■■□□□ 1.34
TSPO-202ENST00000337554 TOPAZ1Q8N9V7 1692 aa23.44■■□□□ 1.34
TSPO-202ENST00000337554 EIF3AQ14152 1382 aaKnown RBP23.44■■□□□ 1.34
TSPO-202ENST00000337554 SLC16A10Q8TF71 515 aa23.44■■□□□ 1.34
TSPO-202ENST00000337554 MINK1Q8N4C8 1332 aaPredicted RBP23.43■■□□□ 1.34
TSPO-202ENST00000337554 POLD1P28340 1107 aa23.43■■□□□ 1.34
TSPO-202ENST00000337554 AKAP12Q02952 1782 aa23.42■■□□□ 1.34
TSPO-202ENST00000337554 LRRC4BQ9NT99 713 aa23.42■■□□□ 1.34
TSPO-202ENST00000337554 WNK3Q9BYP7 1800 aa23.41■■□□□ 1.34
TSPO-202ENST00000337554 JMYQ8N9B5 988 aa23.41■■□□□ 1.34
TSPO-202ENST00000337554 AKT1S1Q96B36 256 aa23.4■■□□□ 1.34
TSPO-202ENST00000337554 SLC4A1APQ9BWU0 796 aaKnown RBP23.4■■□□□ 1.34
TSPO-202ENST00000337554 GCP02774 474 aa23.39■■□□□ 1.33
TSPO-202ENST00000337554 PNPLA7Q6ZV29 1317 aa23.38■■□□□ 1.33
TSPO-202ENST00000337554 PCNTO95613 3336 aa23.38■■□□□ 1.33
TSPO-202ENST00000337554 NHSQ6T4R5 1651 aa23.36■■□□□ 1.33
TSPO-202ENST00000337554 POLR3AO14802 1390 aaPredicted RBP23.36■■□□□ 1.33
TSPO-202ENST00000337554 QSER1Q2KHR3 1735 aa23.36■■□□□ 1.33
TSPO-202ENST00000337554 TOM1L2Q6ZVM7 507 aa23.35■■□□□ 1.33
TSPO-202ENST00000337554 ABTB2Q8N961 1025 aa23.35■■□□□ 1.33
TSPO-202ENST00000337554 NUDT16Q96DE0 195 aaKnown RBP23.34■■□□□ 1.33
TSPO-202ENST00000337554 ADGRB1O14514 1584 aa23.34■■□□□ 1.33
TSPO-202ENST00000337554 KLRG1Q96E93 195 aa23.33■■□□□ 1.33
TSPO-202ENST00000337554 CDCA7Q9BWT1 371 aaPredicted RBP23.33■■□□□ 1.33
TSPO-202ENST00000337554 TRAK1Q9UPV9 953 aa23.33■■□□□ 1.33
TSPO-202ENST00000337554 ACEP12821 1306 aa23.32■■□□□ 1.32
TSPO-202ENST00000337554 ITSN1Q15811 1721 aa23.31■■□□□ 1.32
TSPO-202ENST00000337554 WDR90Q96KV7 1748 aa23.31■■□□□ 1.32
TSPO-202ENST00000337554 HTRA3P83110 453 aa23.31■■□□□ 1.32
TSPO-202ENST00000337554 ACSBG1Q96GR2 724 aa23.3■■□□□ 1.32
TSPO-202ENST00000337554 PCDH10Q9P2E7 1040 aa23.3■■□□□ 1.32
TSPO-202ENST00000337554 AXIN2Q9Y2T1 843 aa23.3■■□□□ 1.32
TSPO-202ENST00000337554 WDR17Q8IZU2 1322 aa23.3■■□□□ 1.32
TSPO-202ENST00000337554 COL18A1P39060 1754 aa23.29■■□□□ 1.32
TSPO-202ENST00000337554 TUBGCP6Q96RT7 1819 aa23.29■■□□□ 1.32
TSPO-202ENST00000337554 TOMM70O94826 608 aa23.28■■□□□ 1.32
TSPO-202ENST00000337554 EXOC5O00471 708 aa23.27■■□□□ 1.32
TSPO-202ENST00000337554 BTAF1O14981 1849 aa23.26■■□□□ 1.31
TSPO-202ENST00000337554 NLRP13Q86W25 1043 aa23.26■■□□□ 1.31
TSPO-202ENST00000337554 USP6P35125 1406 aa23.25■■□□□ 1.31
TSPO-202ENST00000337554 ZBTB7CA1YPR0 619 aa23.25■■□□□ 1.31
TSPO-202ENST00000337554 BRD4O60885 1362 aaPredicted RBP23.25■■□□□ 1.31
TSPO-202ENST00000337554 ARHGEF28Q8N1W1 1705 aaKnown RBP23.25■■□□□ 1.31
TSPO-202ENST00000337554 TNS2Q63HR2 1409 aa23.24■■□□□ 1.31
TSPO-202ENST00000337554 PLEKHG3A1L390 1219 aa23.23■■□□□ 1.31
TSPO-202ENST00000337554 CARD10Q9BWT7 1032 aa23.23■■□□□ 1.31
TSPO-202ENST00000337554 WWC3Q9ULE0 1092 aa23.23■■□□□ 1.31
TSPO-202ENST00000337554 TFCP2L1Q9NZI6 479 aa23.21■■□□□ 1.31
TSPO-202ENST00000337554 SLIT3O75094 1523 aa23.2■■□□□ 1.3
TSPO-202ENST00000337554 CD2APQ9Y5K6 639 aa23.2■■□□□ 1.3
TSPO-202ENST00000337554 KCNQ4P56696 695 aa23.19■■□□□ 1.3
TSPO-202ENST00000337554 SLC27A3Q5K4L6 730 aa23.18■■□□□ 1.3
TSPO-202ENST00000337554 CDK19Q9BWU1 502 aa23.17■■□□□ 1.3
TSPO-202ENST00000337554 CCDC61Q9Y6R9 512 aa23.17■■□□□ 1.3
TSPO-202ENST00000337554 ABCC6O95255 1503 aa23.16■■□□□ 1.3
TSPO-202ENST00000337554 TRPM1Q7Z4N2 1603 aa23.15■■□□□ 1.3
TSPO-202ENST00000337554 COL23A1Q86Y22 540 aaPredicted RBP23.14■■□□□ 1.29
TSPO-202ENST00000337554 MSL1Q68DK7 614 aa23.13■■□□□ 1.29
TSPO-202ENST00000337554 NMRK2Q9NPI5 230 aa23.13■■□□□ 1.29
TSPO-202ENST00000337554 PPIP5K1Q6PFW1 1433 aa23.12■■□□□ 1.29
TSPO-202ENST00000337554 RGPD5Q99666 1765 aa23.12■■□□□ 1.29
TSPO-202ENST00000337554 CPSF1Q10570 1443 aaKnown RBP23.11■■□□□ 1.29
TSPO-202ENST00000337554 RBM46Q8TBY0 533 aaKnown RBP23.11■■□□□ 1.29
TSPO-202ENST00000337554 ARHGEF25Q86VW2 580 aa23.1■■□□□ 1.29
TSPO-202ENST00000337554 CCDC7Q96M83 1385 aa23.1■■□□□ 1.29
TSPO-202ENST00000337554 CICQ96RK0 1608 aaPredicted RBP23.09■■□□□ 1.29
TSPO-202ENST00000337554 HSPA1AP0DMV8 641 aaKnown RBP23.09■■□□□ 1.29
TSPO-202ENST00000337554 HSPA1BP0DMV9 641 aaKnown RBP23.09■■□□□ 1.29
TSPO-202ENST00000337554 NLRP6P59044 892 aa23.09■■□□□ 1.29
TSPO-202ENST00000337554 IGSF1Q8N6C5 1336 aa23.08■■□□□ 1.28
TSPO-202ENST00000337554 CSB-PGBD3P0DP91 1061 aa23.07■■□□□ 1.28
TSPO-202ENST00000337554 MSH5O43196 834 aa23.04■■□□□ 1.28
TSPO-202ENST00000337554 MPHOSPH9Q99550 1183 aa23.04■■□□□ 1.28
TSPO-202ENST00000337554 FSTL1Q12841 308 aa23.03■■□□□ 1.28
TSPO-202ENST00000337554 LY75O60449 1722 aa23.02■■□□□ 1.28
TSPO-202ENST00000337554 PIK3C2AO00443 1686 aa23.01■■□□□ 1.27
TSPO-202ENST00000337554 KAT6BQ8WYB5 2073 aa22.99■■□□□ 1.27
TSPO-202ENST00000337554 NSD2O96028 1365 aa22.98■■□□□ 1.27
TSPO-202ENST00000337554 IL2RBP14784 551 aa22.96■■□□□ 1.27
TSPO-202ENST00000337554 PPARGC1BQ86YN6 1023 aaKnown RBP22.95■■□□□ 1.26
TSPO-202ENST00000337554 CCNL1Q9UK58 526 aaPredicted RBP22.94■■□□□ 1.26
TSPO-202ENST00000337554 NFAT5O94916 1531 aa22.92■■□□□ 1.26
TSPO-202ENST00000337554 PRIM1P49642 420 aaKnown RBP22.92■■□□□ 1.26
TSPO-202ENST00000337554 FAM161AQ3B820 660 aa22.92■■□□□ 1.26
TSPO-202ENST00000337554 SOX12O15370 315 aa22.91■■□□□ 1.26
TSPO-202ENST00000337554 ERBB3P21860 1342 aa22.9■■□□□ 1.26
TSPO-202ENST00000337554 C16orf71Q8IYS4 520 aaPredicted RBP22.9■■□□□ 1.26
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms