RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 CUL7Q14999 1698 aa19.18■□□□□ 0.66
NPHP3-201ENST00000337331 LRPPRCP42704 1394 aaKnown RBP19.17■□□□□ 0.66
NPHP3-201ENST00000337331 AKAP17AQ02040 695 aaKnown RBP19.17■□□□□ 0.66
NPHP3-201ENST00000337331 GPATCH11Q8N954 259 aa19.17■□□□□ 0.66
NPHP3-201ENST00000337331 C16orf45Q96MC5 204 aaPredicted RBP19.17■□□□□ 0.66
NPHP3-201ENST00000337331 CWC15Q9P013 229 aaKnown RBP19.17■□□□□ 0.66
NPHP3-201ENST00000337331 SLC4A2P04920 1241 aa19.17■□□□□ 0.66
NPHP3-201ENST00000337331 SYNE3Q6ZMZ3 975 aa19.17■□□□□ 0.66
NPHP3-201ENST00000337331 RIC3Q7Z5B4 369 aa19.16■□□□□ 0.66
NPHP3-201ENST00000337331 KIAA0586Q9BVV6 1533 aa19.16■□□□□ 0.66
NPHP3-201ENST00000337331 ZNF500O60304 480 aaPredicted RBP19.16■□□□□ 0.66
NPHP3-201ENST00000337331 TXNDC2Q86VQ3 553 aa19.16■□□□□ 0.66
NPHP3-201ENST00000337331 RBM42Q9BTD8 480 aaKnown RBP19.16■□□□□ 0.66
NPHP3-201ENST00000337331 GRIN2AQ12879 1464 aa19.16■□□□□ 0.66
NPHP3-201ENST00000337331 CT47B1P0C2W7 299 aaPredicted RBP19.16■□□□□ 0.66
NPHP3-201ENST00000337331 FOSBP53539 338 aa19.16■□□□□ 0.66
NPHP3-201ENST00000337331 RAPGEF4Q8WZA2 1011 aa19.16■□□□□ 0.66
NPHP3-201ENST00000337331 CDK19Q9BWU1 502 aa19.16■□□□□ 0.66
NPHP3-201ENST00000337331 CWC22Q9HCG8 908 aaKnown RBP19.16■□□□□ 0.66
NPHP3-201ENST00000337331 ADCY5O95622 1261 aa19.15■□□□□ 0.66
NPHP3-201ENST00000337331 CCDC30Q5VVM6 783 aa19.15■□□□□ 0.66
NPHP3-201ENST00000337331 LRSAM1Q6UWE0 723 aa19.15■□□□□ 0.66
NPHP3-201ENST00000337331 SUPT6HQ7KZ85 1726 aaKnown RBP19.15■□□□□ 0.66
NPHP3-201ENST00000337331 ZBTB22O15209 634 aa19.15■□□□□ 0.66
NPHP3-201ENST00000337331 HOMER1Q86YM7 354 aa19.15■□□□□ 0.66
NPHP3-201ENST00000337331 NEUROD6Q96NK8 337 aa19.15■□□□□ 0.66
NPHP3-201ENST00000337331 TRDNQ13061 729 aa19.14■□□□□ 0.65
NPHP3-201ENST00000337331 EVA1CP58658 441 aa19.14■□□□□ 0.65
NPHP3-201ENST00000337331 GAS2L2Q8NHY3 880 aa19.14■□□□□ 0.65
NPHP3-201ENST00000337331 ARGLU1Q9NWB6 273 aaPredicted RBP19.14■□□□□ 0.65
NPHP3-201ENST00000337331 MAGI1Q96QZ7 1491 aaPredicted RBP19.14■□□□□ 0.65
NPHP3-201ENST00000337331 FBXW7Q969H0 707 aa19.14■□□□□ 0.65
NPHP3-201ENST00000337331 HECW1Q76N89 1606 aa19.13■□□□□ 0.65
NPHP3-201ENST00000337331 DHX29Q7Z478 1369 aaKnown RBP19.13■□□□□ 0.65
NPHP3-201ENST00000337331 PCF11O94913 1555 aaKnown RBP19.13■□□□□ 0.65
NPHP3-201ENST00000337331 NINLQ9Y2I6 1382 aa19.13■□□□□ 0.65
NPHP3-201ENST00000337331 CHD1LQ86WJ1 897 aa19.13■□□□□ 0.65
NPHP3-201ENST00000337331 TRIM29Q14134 588 aa19.13■□□□□ 0.65
NPHP3-201ENST00000337331 CCDC27Q2M243 656 aa19.13■□□□□ 0.65
NPHP3-201ENST00000337331 NOC3LQ8WTT2 800 aaKnown RBP19.13■□□□□ 0.65
NPHP3-201ENST00000337331 NLRP2Q9NX02 1062 aa19.13■□□□□ 0.65
NPHP3-201ENST00000337331 FIBPO43427 364 aa19.12■□□□□ 0.65
NPHP3-201ENST00000337331 AEBP2Q6ZN18 517 aaPredicted RBP19.12■□□□□ 0.65
NPHP3-201ENST00000337331 POLR3GO15318 223 aaPredicted RBP19.12■□□□□ 0.65
NPHP3-201ENST00000337331 GNAI2P04899 355 aa19.12■□□□□ 0.65
NPHP3-201ENST00000337331 SKIDA1Q1XH10 827 aa19.12■□□□□ 0.65
NPHP3-201ENST00000337331 CNTROBQ8N137 903 aa19.12■□□□□ 0.65
NPHP3-201ENST00000337331 KRT222Q8N1A0 295 aa19.12■□□□□ 0.65
NPHP3-201ENST00000337331 CCDC73Q6ZRK6 1079 aa19.12■□□□□ 0.65
NPHP3-201ENST00000337331 SMC5Q8IY18 1101 aa19.12■□□□□ 0.65
NPHP3-201ENST00000337331 GDPD2Q9HCC8 539 aa19.12■□□□□ 0.65
NPHP3-201ENST00000337331 OGFRQ9NZT2 677 aa19.11■□□□□ 0.65
NPHP3-201ENST00000337331 ZSCAN21Q9Y5A6 473 aaPredicted RBP19.11■□□□□ 0.65
NPHP3-201ENST00000337331 IQGAP2Q13576 1575 aa19.11■□□□□ 0.65
NPHP3-201ENST00000337331 TMPOP42166 694 aaKnown RBP19.11■□□□□ 0.65
NPHP3-201ENST00000337331 BCL2L12Q9HB09 334 aa19.11■□□□□ 0.65
NPHP3-201ENST00000337331 ABCC5O15440 1437 aa19.11■□□□□ 0.65
NPHP3-201ENST00000337331 ABTB2Q8N961 1025 aa19.11■□□□□ 0.65
NPHP3-201ENST00000337331 MNS1Q8NEH6 495 aa19.11■□□□□ 0.65
NPHP3-201ENST00000337331 ZFP91Q96JP5 570 aaPredicted RBP19.11■□□□□ 0.65
NPHP3-201ENST00000337331 FSD1Q9BTV5 496 aa19.11■□□□□ 0.65
NPHP3-201ENST00000337331 MARCH6O60337 910 aa19.1■□□□□ 0.65
NPHP3-201ENST00000337331 TNNT1P13805 278 aa19.1■□□□□ 0.65
NPHP3-201ENST00000337331 MCM2P49736 904 aa19.1■□□□□ 0.65
NPHP3-201ENST00000337331 SLC52A1Q9NWF4 448 aa19.1■□□□□ 0.65
NPHP3-201ENST00000337331 PLEKHH2Q8IVE3 1493 aa19.1■□□□□ 0.65
NPHP3-201ENST00000337331 TMEM57Q8N5G2 664 aa19.1■□□□□ 0.65
NPHP3-201ENST00000337331 FEZ1Q99689 392 aa19.1■□□□□ 0.65
NPHP3-201ENST00000337331 HDGFL1Q5TGJ6 251 aa19.09■□□□□ 0.65
NPHP3-201ENST00000337331 GTF2A1P52655 376 aaPredicted RBP19.09■□□□□ 0.65
NPHP3-201ENST00000337331 JARID2Q92833 1246 aaPredicted RBP19.09■□□□□ 0.65
NPHP3-201ENST00000337331 RBM25P49756 843 aaKnown RBP19.09■□□□□ 0.65
NPHP3-201ENST00000337331 TSR1Q2NL82 804 aaKnown RBP19.08■□□□□ 0.65
NPHP3-201ENST00000337331 DEF6Q9H4E7 631 aa19.08■□□□□ 0.65
NPHP3-201ENST00000337331 NOL10Q9BSC4 688 aaKnown RBP19.08■□□□□ 0.64
NPHP3-201ENST00000337331 THUMPD2Q9BTF0 503 aaKnown RBP19.08■□□□□ 0.64
NPHP3-201ENST00000337331 PATL2C9JE40 543 aaKnown RBP19.08■□□□□ 0.64
NPHP3-201ENST00000337331 RAPGEF3O95398 923 aa19.08■□□□□ 0.64
NPHP3-201ENST00000337331 SYTL4Q96C24 671 aaPredicted RBP19.08■□□□□ 0.64
NPHP3-201ENST00000337331 NSD3Q9BZ95 1437 aa19.07■□□□□ 0.64
NPHP3-201ENST00000337331 TMX4Q9H1E5 349 aaPredicted RBP19.07■□□□□ 0.64
NPHP3-201ENST00000337331 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.07■□□□□ 0.64
NPHP3-201ENST00000337331 V9GYY5 206 aaPredicted RBP19.07■□□□□ 0.64
NPHP3-201ENST00000337331 RARSP54136 660 aaKnown RBP19.07■□□□□ 0.64
NPHP3-201ENST00000337331 WASHC4Q2M389 1173 aa19.07■□□□□ 0.64
NPHP3-201ENST00000337331 HCLS1P14317 486 aaPredicted RBP19.07■□□□□ 0.64
NPHP3-201ENST00000337331 RALYLQ86SE5 291 aaKnown RBP19.07■□□□□ 0.64
NPHP3-201ENST00000337331 SDF4Q9BRK5 362 aa19.07■□□□□ 0.64
NPHP3-201ENST00000337331 TMX1Q9H3N1 280 aa19.07■□□□□ 0.64
NPHP3-201ENST00000337331 FCHSD2O94868 740 aa19.07■□□□□ 0.64
NPHP3-201ENST00000337331 TPM1P09493 284 aa19.07■□□□□ 0.64
NPHP3-201ENST00000337331 RRS1Q15050 365 aaKnown RBP19.07■□□□□ 0.64
NPHP3-201ENST00000337331 RIOK3O14730 519 aaKnown RBP19.06■□□□□ 0.64
NPHP3-201ENST00000337331 SNX21Q969T3 373 aa19.06■□□□□ 0.64
NPHP3-201ENST00000337331 NFXL1Q6ZNB6 911 aa19.06■□□□□ 0.64
NPHP3-201ENST00000337331 SSH1Q8WYL5 1049 aa19.06■□□□□ 0.64
NPHP3-201ENST00000337331 USP19O94966 1318 aa19.06■□□□□ 0.64
NPHP3-201ENST00000337331 ZSCAN20P17040 1043 aaPredicted RBP19.05■□□□□ 0.64
NPHP3-201ENST00000337331 PSMA5P28066 241 aa19.05■□□□□ 0.64
NPHP3-201ENST00000337331 TNNQ9UQP3 1299 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms