RNA–Protein interactions for RNA: ENST00000334348.7

UPK3B-202, Transcript of uroplakin 3B, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene UPK3B, Length 2,373 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-202ENST00000334348 MROH2AA6NES4 1674 aa20.14■□□□□ 0.81
UPK3B-202ENST00000334348 CALD1Q05682 793 aaKnown RBP20.14■□□□□ 0.81
UPK3B-202ENST00000334348 MAP7D2Q96T17 732 aa20.14■□□□□ 0.81
UPK3B-202ENST00000334348 CHMP4BQ9H444 224 aaKnown RBP20.14■□□□□ 0.81
UPK3B-202ENST00000334348 NOL7Q9UMY1 257 aaKnown RBP20.14■□□□□ 0.81
UPK3B-202ENST00000334348 MED14O60244 1454 aa20.14■□□□□ 0.81
UPK3B-202ENST00000334348 U2SURPO15042 1029 aaKnown RBP20.13■□□□□ 0.81
UPK3B-202ENST00000334348 PPIP5K1Q6PFW1 1433 aa20.13■□□□□ 0.81
UPK3B-202ENST00000334348 ADGRB1O14514 1584 aa20.13■□□□□ 0.81
UPK3B-202ENST00000334348 ZNF500O60304 480 aaPredicted RBP20.13■□□□□ 0.81
UPK3B-202ENST00000334348 LMTK2Q8IWU2 1503 aa20.12■□□□□ 0.81
UPK3B-202ENST00000334348 ZBTB7BO15156 539 aaPredicted RBP20.12■□□□□ 0.81
UPK3B-202ENST00000334348 NUCB2P80303 420 aa20.12■□□□□ 0.81
UPK3B-202ENST00000334348 PDLIM2Q96JY6 352 aa20.12■□□□□ 0.81
UPK3B-202ENST00000334348 ADGRB3O60242 1522 aa20.11■□□□□ 0.81
UPK3B-202ENST00000334348 ZNF428Q96B54 188 aa20.11■□□□□ 0.81
UPK3B-202ENST00000334348 EVC2Q86UK5 1308 aa20.11■□□□□ 0.81
UPK3B-202ENST00000334348 CDC45O75419 566 aa20.1■□□□□ 0.81
UPK3B-202ENST00000334348 ZSCAN23Q3MJ62 389 aa20.1■□□□□ 0.81
UPK3B-202ENST00000334348 COL3A1P02461 1466 aaPredicted RBP20.1■□□□□ 0.81
UPK3B-202ENST00000334348 CYP2E1P05181 493 aaPredicted RBP20.1■□□□□ 0.81
UPK3B-202ENST00000334348 RABEP1Q15276 862 aa20.1■□□□□ 0.81
UPK3B-202ENST00000334348 LMBRD1Q9NUN5 540 aa20.1■□□□□ 0.81
UPK3B-202ENST00000334348 MCTP1Q6DN14 999 aa20.09■□□□□ 0.81
UPK3B-202ENST00000334348 NPATQ14207 1427 aa20.09■□□□□ 0.81
UPK3B-202ENST00000334348 FER1L4A9Z1Z3 1794 aa20.09■□□□□ 0.81
UPK3B-202ENST00000334348 CAVIN1Q6NZI2 390 aaKnown RBP20.09■□□□□ 0.81
UPK3B-202ENST00000334348 R3HCC1Q9Y3T6 440 aaKnown RBP20.09■□□□□ 0.81
UPK3B-202ENST00000334348 ADAMTSL3P82987 1691 aa20.08■□□□□ 0.81
UPK3B-202ENST00000334348 RBM10P98175 930 aaKnown RBP20.08■□□□□ 0.8
UPK3B-202ENST00000334348 TMEM132EQ6IEE7 984 aa20.08■□□□□ 0.8
UPK3B-202ENST00000334348 CFAP44Q96MT7 982 aa20.08■□□□□ 0.8
UPK3B-202ENST00000334348 RBSNQ9H1K0 784 aa20.08■□□□□ 0.8
UPK3B-202ENST00000334348 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.08■□□□□ 0.8
UPK3B-202ENST00000334348 RIMS1Q86UR5 1692 aaKnown RBP20.08■□□□□ 0.8
UPK3B-202ENST00000334348 PIK3R4Q99570 1358 aa20.08■□□□□ 0.8
UPK3B-202ENST00000334348 ARHGAP45Q92619 1136 aa20.07■□□□□ 0.8
UPK3B-202ENST00000334348 CAMSAP1Q5T5Y3 1602 aa20.06■□□□□ 0.8
UPK3B-202ENST00000334348 NCLP19338 710 aaKnown RBP20.06■□□□□ 0.8
UPK3B-202ENST00000334348 CHGAP10645 457 aaKnown RBP20.05■□□□□ 0.8
UPK3B-202ENST00000334348 MCM5P33992 734 aa20.05■□□□□ 0.8
UPK3B-202ENST00000334348 SIRT2Q8IXJ6 389 aa20.05■□□□□ 0.8
UPK3B-202ENST00000334348 CWC22Q9HCG8 908 aaKnown RBP20.05■□□□□ 0.8
UPK3B-202ENST00000334348 TULP4Q9NRJ4 1543 aa20.05■□□□□ 0.8
UPK3B-202ENST00000334348 PPP6R1Q9UPN7 881 aa20.05■□□□□ 0.8
UPK3B-202ENST00000334348 CSPP1Q1MSJ5 1256 aa20.04■□□□□ 0.8
UPK3B-202ENST00000334348 ZKSCAN5Q9Y2L8 839 aa20.04■□□□□ 0.8
UPK3B-202ENST00000334348 PRIM1P49642 420 aaKnown RBP20.03■□□□□ 0.8
UPK3B-202ENST00000334348 C1orf115Q9H7X2 142 aa20.03■□□□□ 0.8
UPK3B-202ENST00000334348 FAM13BQ9NYF5 915 aa20.03■□□□□ 0.8
UPK3B-202ENST00000334348 PTCH1Q13635 1447 aa20.03■□□□□ 0.8
UPK3B-202ENST00000334348 GSPT1P15170 499 aaKnown RBP20.02■□□□□ 0.8
UPK3B-202ENST00000334348 MTERF4Q7Z6M4 381 aaKnown RBP20.02■□□□□ 0.8
UPK3B-202ENST00000334348 MRPL50Q8N5N7 158 aaKnown RBP20.02■□□□□ 0.8
UPK3B-202ENST00000334348 RPGRIP1LQ68CZ1 1315 aa20.02■□□□□ 0.8
UPK3B-202ENST00000334348 UQCRHLA0A096LP55 91 aa20.02■□□□□ 0.8
UPK3B-202ENST00000334348 UQCRHP07919 91 aa20.02■□□□□ 0.8
UPK3B-202ENST00000334348 XPCQ01831 940 aaPredicted RBP20.02■□□□□ 0.8
UPK3B-202ENST00000334348 PPLO60437 1756 aa20.01■□□□□ 0.79
UPK3B-202ENST00000334348 PRDM4Q9UKN5 801 aa20.01■□□□□ 0.79
UPK3B-202ENST00000334348 USP26Q9BXU7 913 aa20.01■□□□□ 0.79
UPK3B-202ENST00000334348 GGNBP2Q9H3C7 697 aa20.01■□□□□ 0.79
UPK3B-202ENST00000334348 CABP2Q9NPB3 220 aa20.01■□□□□ 0.79
UPK3B-202ENST00000334348 PTPRMP28827 1452 aa20.01■□□□□ 0.79
UPK3B-202ENST00000334348 C3P01024 1663 aa20■□□□□ 0.79
UPK3B-202ENST00000334348 DYNC1I1O14576 645 aa20■□□□□ 0.79
UPK3B-202ENST00000334348 DIAPH1O60610 1272 aaKnown RBP20■□□□□ 0.79
UPK3B-202ENST00000334348 A0A1W2PP64 1363 aa20■□□□□ 0.79
UPK3B-202ENST00000334348 VAMP4O75379 141 aa20■□□□□ 0.79
UPK3B-202ENST00000334348 PLEKHM2Q8IWE5 1019 aa20■□□□□ 0.79
UPK3B-202ENST00000334348 PKP1Q13835 747 aa19.99■□□□□ 0.79
UPK3B-202ENST00000334348 GPT2Q8TD30 523 aa19.99■□□□□ 0.79
UPK3B-202ENST00000334348 ABCC4O15439 1325 aa19.99■□□□□ 0.79
UPK3B-202ENST00000334348 PRPF40AO75400 957 aaKnown RBP19.99■□□□□ 0.79
UPK3B-202ENST00000334348 LRSAM1Q6UWE0 723 aa19.99■□□□□ 0.79
UPK3B-202ENST00000334348 PNPLA6Q8IY17 1366 aa19.99■□□□□ 0.79
UPK3B-202ENST00000334348 FCHSD2O94868 740 aa19.98■□□□□ 0.79
UPK3B-202ENST00000334348 CCDC39Q9UFE4 941 aa19.98■□□□□ 0.79
UPK3B-202ENST00000334348 TTC22Q5TAA0 569 aa19.97■□□□□ 0.79
UPK3B-202ENST00000334348 FYB1O15117 783 aa19.97■□□□□ 0.79
UPK3B-202ENST00000334348 RBM27Q9P2N5 1060 aaKnown RBP19.97■□□□□ 0.79
UPK3B-202ENST00000334348 INTS3Q68E01 1043 aaKnown RBP19.96■□□□□ 0.79
UPK3B-202ENST00000334348 ST18O60284 1047 aa19.95■□□□□ 0.78
UPK3B-202ENST00000334348 SASS6Q6UVJ0 657 aa19.95■□□□□ 0.78
UPK3B-202ENST00000334348 ZDHHC9Q9Y397 364 aa19.95■□□□□ 0.78
UPK3B-202ENST00000334348 IDI1Q13907 227 aa19.95■□□□□ 0.78
UPK3B-202ENST00000334348 DCTPP1Q9H773 170 aa19.94■□□□□ 0.78
UPK3B-202ENST00000334348 TMEM63CQ9P1W3 806 aa19.94■□□□□ 0.78
UPK3B-202ENST00000334348 ARHGEF28Q8N1W1 1705 aaKnown RBP19.94■□□□□ 0.78
UPK3B-202ENST00000334348 ZGPATQ8N5A5 531 aaKnown RBP19.94■□□□□ 0.78
UPK3B-202ENST00000334348 PREX1Q8TCU6 1659 aa19.94■□□□□ 0.78
UPK3B-202ENST00000334348 AK9Q5TCS8 1911 aa19.94■□□□□ 0.78
UPK3B-202ENST00000334348 SMAP1Q8IYB5 467 aaPredicted RBP19.93■□□□□ 0.78
UPK3B-202ENST00000334348 KIF24Q5T7B8 1368 aa19.93■□□□□ 0.78
UPK3B-202ENST00000334348 TSPYL6Q8N831 410 aa19.92■□□□□ 0.78
UPK3B-202ENST00000334348 FAM135BQ49AJ0 1406 aa19.92■□□□□ 0.78
UPK3B-202ENST00000334348 CDC42BPGQ6DT37 1551 aa19.92■□□□□ 0.78
UPK3B-202ENST00000334348 SYCE3A1L190 88 aa19.92■□□□□ 0.78
UPK3B-202ENST00000334348 API5Q9BZZ5 524 aaKnown RBP19.92■□□□□ 0.78
UPK3B-202ENST00000334348 TERF2IPQ9NYB0 399 aa19.92■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms