RNA–Protein interactions for RNA: ENST00000321453.11

PDE1C-201, Transcript of phosphodiesterase 1C, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene PDE1C, Length 2,898 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE1C-201ENST00000321453 GCC1Q96CN9 775 aa20.3■□□□□ 0.84
PDE1C-201ENST00000321453 UGGT1Q9NYU2 1555 aa20.29■□□□□ 0.84
PDE1C-201ENST00000321453 SAFB2Q14151 953 aaKnown RBP eCLIP20.29■□□□□ 0.84
PDE1C-201ENST00000321453 THUMPD2Q9BTF0 503 aaKnown RBP20.29■□□□□ 0.84
PDE1C-201ENST00000321453 PLCB2Q00722 1185 aa20.28■□□□□ 0.84
PDE1C-201ENST00000321453 USP26Q9BXU7 913 aa20.28■□□□□ 0.84
PDE1C-201ENST00000321453 GGNBP2Q9H3C7 697 aa20.28■□□□□ 0.84
PDE1C-201ENST00000321453 USP25Q9UHP3 1055 aa20.28■□□□□ 0.84
PDE1C-201ENST00000321453 UTP14CQ5TAP6 766 aaKnown RBP20.27■□□□□ 0.84
PDE1C-201ENST00000321453 TSPY26PQ9H489 355 aa20.27■□□□□ 0.84
PDE1C-201ENST00000321453 PLEKHF1Q96S99 279 aa20.27■□□□□ 0.83
PDE1C-201ENST00000321453 PLEKHM2Q8IWE5 1019 aa20.26■□□□□ 0.83
PDE1C-201ENST00000321453 ABCC11Q96J66 1382 aa20.26■□□□□ 0.83
PDE1C-201ENST00000321453 ST18O60284 1047 aa20.25■□□□□ 0.83
PDE1C-201ENST00000321453 NOLC1Q14978 699 aaKnown RBP eCLIP20.25■□□□□ 0.83
PDE1C-201ENST00000321453 ABCA6Q8N139 1617 aa20.25■□□□□ 0.83
PDE1C-201ENST00000321453 SMARCA5O60264 1052 aaPredicted RBP20.24■□□□□ 0.83
PDE1C-201ENST00000321453 TSPYL6Q8N831 410 aa20.24■□□□□ 0.83
PDE1C-201ENST00000321453 BBXQ8WY36 941 aaPredicted RBP20.24■□□□□ 0.83
PDE1C-201ENST00000321453 TRPM2O94759 1503 aa20.24■□□□□ 0.83
PDE1C-201ENST00000321453 AFAP1Q8N556 730 aa20.23■□□□□ 0.83
PDE1C-201ENST00000321453 GADD45BO75293 160 aaPredicted RBP20.23■□□□□ 0.83
PDE1C-201ENST00000321453 NUTM2DQ5VT03 806 aaPredicted RBP20.23■□□□□ 0.83
PDE1C-201ENST00000321453 BCL2L12Q9HB09 334 aa20.23■□□□□ 0.83
PDE1C-201ENST00000321453 CWC22Q9HCG8 908 aaKnown RBP20.23■□□□□ 0.83
PDE1C-201ENST00000321453 ARHGAP31Q2M1Z3 1444 aa20.22■□□□□ 0.83
PDE1C-201ENST00000321453 BCL11BQ9C0K0 894 aaPredicted RBP20.22■□□□□ 0.83
PDE1C-201ENST00000321453 CABP2Q9NPB3 220 aa20.22■□□□□ 0.83
PDE1C-201ENST00000321453 U2AF2P26368 475 aaKnown RBP eCLIP20.22■□□□□ 0.83
PDE1C-201ENST00000321453 TTC22Q5TAA0 569 aa20.21■□□□□ 0.83
PDE1C-201ENST00000321453 KIF3AQ9Y496 699 aa20.21■□□□□ 0.83
PDE1C-201ENST00000321453 SLC24A1O60721 1099 aa20.21■□□□□ 0.83
PDE1C-201ENST00000321453 ADGRB2O60241 1585 aa20.2■□□□□ 0.82
PDE1C-201ENST00000321453 ERCC6Q03468 1493 aa20.2■□□□□ 0.82
PDE1C-201ENST00000321453 SDSP20132 328 aa20.2■□□□□ 0.82
PDE1C-201ENST00000321453 NEK4P51957 841 aa20.2■□□□□ 0.82
PDE1C-201ENST00000321453 INTS3Q68E01 1043 aaKnown RBP20.2■□□□□ 0.82
PDE1C-201ENST00000321453 PIBF1Q8WXW3 757 aa20.2■□□□□ 0.82
PDE1C-201ENST00000321453 MBD3O95983 291 aa20.19■□□□□ 0.82
PDE1C-201ENST00000321453 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP20.19■□□□□ 0.82
PDE1C-201ENST00000321453 TRAPPC8Q9Y2L5 1435 aa20.19■□□□□ 0.82
PDE1C-201ENST00000321453 ADCY5O95622 1261 aa20.18■□□□□ 0.82
PDE1C-201ENST00000321453 FBLN1P23142 703 aa20.18■□□□□ 0.82
PDE1C-201ENST00000321453 PDCL2Q8N4E4 241 aa20.18■□□□□ 0.82
PDE1C-201ENST00000321453 KIF3BO15066 747 aa20.18■□□□□ 0.82
PDE1C-201ENST00000321453 PRIMPOLQ96LW4 560 aa20.18■□□□□ 0.82
PDE1C-201ENST00000321453 ALDH1L2Q3SY69 923 aa20.17■□□□□ 0.82
PDE1C-201ENST00000321453 STAC3Q96MF2 364 aa20.17■□□□□ 0.82
PDE1C-201ENST00000321453 MRPL50Q8N5N7 158 aaKnown RBP20.17■□□□□ 0.82
PDE1C-201ENST00000321453 TMX3Q96JJ7 454 aa20.17■□□□□ 0.82
PDE1C-201ENST00000321453 HCLS1P14317 486 aaPredicted RBP20.17■□□□□ 0.82
PDE1C-201ENST00000321453 SPAG9O60271 1321 aaKnown RBP20.16■□□□□ 0.82
PDE1C-201ENST00000321453 ZBTB22O15209 634 aa20.16■□□□□ 0.82
PDE1C-201ENST00000321453 HMGN5P82970 282 aaKnown RBP20.16■□□□□ 0.82
PDE1C-201ENST00000321453 GTPBP4Q9BZE4 634 aaKnown RBP20.16■□□□□ 0.82
PDE1C-201ENST00000321453 MAP3K4Q9Y6R4 1608 aa20.16■□□□□ 0.82
PDE1C-201ENST00000321453 DTNBO60941 627 aa20.14■□□□□ 0.82
PDE1C-201ENST00000321453 GTF2E1P29083 439 aaPredicted RBP20.14■□□□□ 0.82
PDE1C-201ENST00000321453 VAMP4O75379 141 aa20.14■□□□□ 0.81
PDE1C-201ENST00000321453 HMOX1P09601 288 aa20.14■□□□□ 0.81
PDE1C-201ENST00000321453 TSHZ3Q63HK5 1081 aa20.14■□□□□ 0.81
PDE1C-201ENST00000321453 SPC24Q8NBT2 197 aa20.14■□□□□ 0.81
PDE1C-201ENST00000321453 CGNQ9P2M7 1197 aaKnown RBP20.14■□□□□ 0.81
PDE1C-201ENST00000321453 MED14O60244 1454 aa20.14■□□□□ 0.81
PDE1C-201ENST00000321453 RIOK3O14730 519 aaKnown RBP20.13■□□□□ 0.81
PDE1C-201ENST00000321453 IL16Q14005 1332 aa20.13■□□□□ 0.81
PDE1C-201ENST00000321453 PRKAR2BP31323 418 aa20.13■□□□□ 0.81
PDE1C-201ENST00000321453 CASC1Q6TDU7 716 aa20.13■□□□□ 0.81
PDE1C-201ENST00000321453 ZNF771Q7L3S4 317 aaPredicted RBP20.12■□□□□ 0.81
PDE1C-201ENST00000321453 USP48Q86UV5 1035 aa20.12■□□□□ 0.81
PDE1C-201ENST00000321453 ADGRL1O94910 1474 aa20.12■□□□□ 0.81
PDE1C-201ENST00000321453 VGLL3A8MV65 326 aa20.12■□□□□ 0.81
PDE1C-201ENST00000321453 SYAP1Q96A49 352 aaPredicted RBP20.12■□□□□ 0.81
PDE1C-201ENST00000321453 PYCARDQ9ULZ3 195 aa20.12■□□□□ 0.81
PDE1C-201ENST00000321453 LETM1O95202 739 aaPredicted RBP20.11■□□□□ 0.81
PDE1C-201ENST00000321453 PPRC1Q5VV67 1664 aaKnown RBP20.11■□□□□ 0.81
PDE1C-201ENST00000321453 DIAPH1O60610 1272 aaKnown RBP20.11■□□□□ 0.81
PDE1C-201ENST00000321453 KIF20AO95235 890 aa20.11■□□□□ 0.81
PDE1C-201ENST00000321453 BRD1O95696 1058 aa20.11■□□□□ 0.81
PDE1C-201ENST00000321453 MAPK8IP2Q13387 824 aaPredicted RBP20.11■□□□□ 0.81
PDE1C-201ENST00000321453 FKBP5Q13451 457 aaPredicted RBP20.11■□□□□ 0.81
PDE1C-201ENST00000321453 KIAA1210Q9ULL0 1709 aa20.1■□□□□ 0.81
PDE1C-201ENST00000321453 GTF2F1P35269 517 aaKnown RBP eCLIP20.1■□□□□ 0.81
PDE1C-201ENST00000321453 UPF3BQ9BZI7 483 aaKnown RBP20.09■□□□□ 0.81
PDE1C-201ENST00000321453 EFCAB2Q5VUJ9 269 aa20.09■□□□□ 0.81
PDE1C-201ENST00000321453 PHACTR3Q96KR7 559 aa20.09■□□□□ 0.81
PDE1C-201ENST00000321453 PALD1Q9ULE6 856 aa20.09■□□□□ 0.81
PDE1C-201ENST00000321453 SBNO2Q9Y2G9 1366 aa20.09■□□□□ 0.81
PDE1C-201ENST00000321453 QRICH2Q9H0J4 1663 aa20.09■□□□□ 0.81
PDE1C-201ENST00000321453 DCTPP1Q9H773 170 aa20.09■□□□□ 0.81
PDE1C-201ENST00000321453 REC8O95072 547 aa20.08■□□□□ 0.81
PDE1C-201ENST00000321453 NCBP3Q53F19 620 aaKnown RBP20.08■□□□□ 0.81
PDE1C-201ENST00000321453 SRPK2P78362 688 aaKnown RBP20.08■□□□□ 0.8
PDE1C-201ENST00000321453 PDE4CQ08493 712 aa20.08■□□□□ 0.8
PDE1C-201ENST00000321453 KRT24Q2M2I5 525 aa20.08■□□□□ 0.8
PDE1C-201ENST00000321453 CHMP4BQ9H444 224 aaKnown RBP20.08■□□□□ 0.8
PDE1C-201ENST00000321453 ABCC4O15439 1325 aa20.07■□□□□ 0.8
PDE1C-201ENST00000321453 ERC2O15083 957 aa20.07■□□□□ 0.8
PDE1C-201ENST00000321453 TWISTNBQ3B726 338 aaPredicted RBP20.07■□□□□ 0.8
PDE1C-201ENST00000321453 C8orf58Q8NAV2 365 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms