RNA–Protein interactions for RNA: ENST00000320017.10

SCAP-202, Transcript of SREBF chaperone, humanhuman

TSL 2

Gene SCAP, Length 3,430 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAP-202ENST00000320017 EXOSC9Q06265 439 aaKnown RBP18.39■□□□□ 0.53
SCAP-202ENST00000320017 C14orf93Q9H972 538 aaKnown RBP18.39■□□□□ 0.53
SCAP-202ENST00000320017 HMGN5P82970 282 aaKnown RBP18.38■□□□□ 0.53
SCAP-202ENST00000320017 PDLIM2Q96JY6 352 aa18.38■□□□□ 0.53
SCAP-202ENST00000320017 CFAP53Q96M91 514 aa18.38■□□□□ 0.53
SCAP-202ENST00000320017 MLH3Q9UHC1 1453 aa18.38■□□□□ 0.53
SCAP-202ENST00000320017 WAPLQ7Z5K2 1190 aa18.38■□□□□ 0.53
SCAP-202ENST00000320017 TRMT2AQ8IZ69 625 aaKnown RBP18.38■□□□□ 0.53
SCAP-202ENST00000320017 CHAMP1Q96JM3 812 aa18.38■□□□□ 0.53
SCAP-202ENST00000320017 TRPM2O94759 1503 aa18.38■□□□□ 0.53
SCAP-202ENST00000320017 SLC52A1Q9NWF4 448 aa18.37■□□□□ 0.53
SCAP-202ENST00000320017 ASXL1Q8IXJ9 1541 aa18.37■□□□□ 0.53
SCAP-202ENST00000320017 VIRMAQ69YN4 1812 aaKnown RBP18.36■□□□□ 0.53
SCAP-202ENST00000320017 NEO1Q92859 1461 aa18.36■□□□□ 0.53
SCAP-202ENST00000320017 INSRP06213 1382 aa18.36■□□□□ 0.53
SCAP-202ENST00000320017 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.36■□□□□ 0.53
SCAP-202ENST00000320017 AEBP1Q8IUX7 1158 aa18.36■□□□□ 0.53
SCAP-202ENST00000320017 BCL2L12Q9HB09 334 aa18.36■□□□□ 0.53
SCAP-202ENST00000320017 RIMBP3CA6NJZ7 1639 aa18.35■□□□□ 0.53
SCAP-202ENST00000320017 RIMBP3BA6NNM3 1639 aa18.35■□□□□ 0.53
SCAP-202ENST00000320017 RIMBP3Q9UFD9 1639 aa18.35■□□□□ 0.53
SCAP-202ENST00000320017 FOXD4L6Q3SYB3 417 aaPredicted RBP18.35■□□□□ 0.53
SCAP-202ENST00000320017 FOXD4L3Q6VB84 417 aaPredicted RBP18.35■□□□□ 0.53
SCAP-202ENST00000320017 C1orf115Q9H7X2 142 aa18.35■□□□□ 0.53
SCAP-202ENST00000320017 TAF3Q5VWG9 929 aa18.35■□□□□ 0.53
SCAP-202ENST00000320017 TRERF1Q96PN7 1200 aa18.35■□□□□ 0.53
SCAP-202ENST00000320017 TTC12Q9H892 705 aaPredicted RBP18.35■□□□□ 0.53
SCAP-202ENST00000320017 CHAF1AQ13111 956 aaPredicted RBP18.34■□□□□ 0.53
SCAP-202ENST00000320017 SOX12O15370 315 aa18.34■□□□□ 0.53
SCAP-202ENST00000320017 NINLQ9Y2I6 1382 aa18.34■□□□□ 0.53
SCAP-202ENST00000320017 HECW2Q9P2P5 1572 aa18.33■□□□□ 0.53
SCAP-202ENST00000320017 PRIMPOLQ96LW4 560 aa18.33■□□□□ 0.53
SCAP-202ENST00000320017 PKP1Q13835 747 aa18.33■□□□□ 0.52
SCAP-202ENST00000320017 CERS3Q8IU89 383 aa18.33■□□□□ 0.52
SCAP-202ENST00000320017 THUMPD2Q9BTF0 503 aaKnown RBP18.33■□□□□ 0.52
SCAP-202ENST00000320017 RBM25P49756 843 aaKnown RBP18.33■□□□□ 0.52
SCAP-202ENST00000320017 TXNDC2Q86VQ3 553 aa18.33■□□□□ 0.52
SCAP-202ENST00000320017 NOLC1Q14978 699 aaKnown RBP eCLIP18.32■□□□□ 0.522e-6■■□□□ 12
SCAP-202ENST00000320017 DZIP1LQ8IYY4 767 aaKnown RBP18.32■□□□□ 0.52
SCAP-202ENST00000320017 MVPQ14764 893 aaKnown RBP18.32■□□□□ 0.52
SCAP-202ENST00000320017 LMBRD1Q9NUN5 540 aa18.32■□□□□ 0.52
SCAP-202ENST00000320017 EVC2Q86UK5 1308 aa18.32■□□□□ 0.52
SCAP-202ENST00000320017 ERICH4A6NGS2 130 aa18.32■□□□□ 0.52
SCAP-202ENST00000320017 APBB1O00213 710 aa18.31■□□□□ 0.52
SCAP-202ENST00000320017 NCOA3Q9Y6Q9 1424 aa18.31■□□□□ 0.52
SCAP-202ENST00000320017 IBTKQ9P2D0 1353 aaPredicted RBP18.31■□□□□ 0.52
SCAP-202ENST00000320017 CEP152O94986 1710 aa18.31■□□□□ 0.52
SCAP-202ENST00000320017 TET3O43151 1660 aa18.31■□□□□ 0.52
SCAP-202ENST00000320017 ZKSCAN2Q63HK3 967 aa18.31■□□□□ 0.52
SCAP-202ENST00000320017 NOB1Q9ULX3 412 aaKnown RBP18.31■□□□□ 0.52
SCAP-202ENST00000320017 EFCAB6Q5THR3 1501 aa18.31■□□□□ 0.52
SCAP-202ENST00000320017 NUCB2P80303 420 aa18.3■□□□□ 0.52
SCAP-202ENST00000320017 KIF16BQ96L93 1317 aa18.3■□□□□ 0.52
SCAP-202ENST00000320017 LRSAM1Q6UWE0 723 aa18.3■□□□□ 0.52
SCAP-202ENST00000320017 SSH1Q8WYL5 1049 aa18.3■□□□□ 0.52
SCAP-202ENST00000320017 TMEM63CQ9P1W3 806 aa18.3■□□□□ 0.52
SCAP-202ENST00000320017 PPRC1Q5VV67 1664 aaKnown RBP18.3■□□□□ 0.52
SCAP-202ENST00000320017 HMOX1P09601 288 aa18.29■□□□□ 0.52
SCAP-202ENST00000320017 SPHKAPQ2M3C7 1700 aa18.29■□□□□ 0.52
SCAP-202ENST00000320017 SLC26A8Q96RN1 970 aa18.29■□□□□ 0.52
SCAP-202ENST00000320017 ABCA6Q8N139 1617 aa18.29■□□□□ 0.52
SCAP-202ENST00000320017 GPT2Q8TD30 523 aa18.29■□□□□ 0.52
SCAP-202ENST00000320017 FRMPD1Q5SYB0 1578 aa18.28■□□□□ 0.52
SCAP-202ENST00000320017 PIK3C2GO75747 1445 aa18.28■□□□□ 0.52
SCAP-202ENST00000320017 ABCC3O15438 1527 aa18.28■□□□□ 0.52
SCAP-202ENST00000320017 USP25Q9UHP3 1055 aa18.28■□□□□ 0.52
SCAP-202ENST00000320017 RPGRIP1LQ68CZ1 1315 aa18.28■□□□□ 0.52
SCAP-202ENST00000320017 TRIM27P14373 513 aa18.27■□□□□ 0.52
SCAP-202ENST00000320017 EIF2AK4Q9P2K8 1649 aaKnown RBP18.27■□□□□ 0.52
SCAP-202ENST00000320017 IRX5P78411 483 aaPredicted RBP18.27■□□□□ 0.51
SCAP-202ENST00000320017 TSPY26PQ9H489 355 aa18.27■□□□□ 0.51
SCAP-202ENST00000320017 TMEM57Q8N5G2 664 aa18.26■□□□□ 0.51
SCAP-202ENST00000320017 ANKRD45Q5TZF3 282 aa18.26■□□□□ 0.51
SCAP-202ENST00000320017 CABP1Q9NZU7 370 aa18.26■□□□□ 0.51
SCAP-202ENST00000320017 NSFL1CQ9UNZ2 370 aaKnown RBP18.26■□□□□ 0.51
SCAP-202ENST00000320017 MROH1Q8NDA8 1641 aa18.26■□□□□ 0.51
SCAP-202ENST00000320017 RNF17Q9BXT8 1623 aaKnown RBP18.25■□□□□ 0.51
SCAP-202ENST00000320017 ERVK-7P63135 1459 aa18.24■□□□□ 0.51
SCAP-202ENST00000320017 PIBF1Q8WXW3 757 aa18.24■□□□□ 0.51
SCAP-202ENST00000320017 CDK19Q9BWU1 502 aa18.24■□□□□ 0.51
SCAP-202ENST00000320017 RIOK3O14730 519 aaKnown RBP18.24■□□□□ 0.51
SCAP-202ENST00000320017 NCKAP5LQ9HCH0 1330 aa18.24■□□□□ 0.51
SCAP-202ENST00000320017 ZMYM3Q14202 1370 aa18.24■□□□□ 0.51
SCAP-202ENST00000320017 ZGPATQ8N5A5 531 aaKnown RBP18.23■□□□□ 0.51
SCAP-202ENST00000320017 KIF2CQ99661 725 aa18.23■□□□□ 0.51
SCAP-202ENST00000320017 DIAPH3Q9NSV4 1193 aa18.23■□□□□ 0.51
SCAP-202ENST00000320017 MADDQ8WXG6 1647 aa18.23■□□□□ 0.51
SCAP-202ENST00000320017 CCDC66A2RUB6 948 aa18.22■□□□□ 0.51
SCAP-202ENST00000320017 ZBTB9Q96C00 473 aa18.22■□□□□ 0.51
SCAP-202ENST00000320017 DIP2CQ9Y2E4 1556 aa18.22■□□□□ 0.51
SCAP-202ENST00000320017 TBC1D9Q6ZT07 1266 aa18.21■□□□□ 0.51
SCAP-202ENST00000320017 CFAP74Q9C0B2 1584 aa18.21■□□□□ 0.51
SCAP-202ENST00000320017 TMPOP42166 694 aaKnown RBP18.21■□□□□ 0.51
SCAP-202ENST00000320017 NOL8Q76FK4 1167 aaKnown RBP18.21■□□□□ 0.51
SCAP-202ENST00000320017 TRIM6-TRIM34B2RNG4 842 aa18.2■□□□□ 0.5
SCAP-202ENST00000320017 RBM33Q96EV2 1170 aaKnown RBP18.2■□□□□ 0.5
SCAP-202ENST00000320017 TRIM34Q9BYJ4 488 aa18.2■□□□□ 0.5
SCAP-202ENST00000320017 WDR63Q8IWG1 891 aa18.2■□□□□ 0.5
SCAP-202ENST00000320017 IRX3P78415 501 aaPredicted RBP18.19■□□□□ 0.5
SCAP-202ENST00000320017 SPC24Q8NBT2 197 aa18.19■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 67.8 ms