RNA–Protein interactions for RNA: ENST00000316048.2

SMCO3-201, Transcript of single-pass membrane protein with coiled-coil domains 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO3, Length 2,104 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO3-201ENST00000316048 MAGEB6P1A0A0J9YX57 407 aa6.95□□□□□ -1.3
SMCO3-201ENST00000316048 PHLDB3Q6NSJ2 640 aa6.95□□□□□ -1.3
SMCO3-201ENST00000316048 SH3BP5LQ7L8J4 393 aa6.95□□□□□ -1.3
SMCO3-201ENST00000316048 GPSM3Q9Y4H4 160 aa6.95□□□□□ -1.3
SMCO3-201ENST00000316048 ELOAQ14241 798 aaKnown RBP6.95□□□□□ -1.3
SMCO3-201ENST00000316048 LINC01559Q495D7 138 aa6.95□□□□□ -1.3
SMCO3-201ENST00000316048 SCNN1AP37088 669 aa6.94□□□□□ -1.3
SMCO3-201ENST00000316048 PTK7Q13308 1070 aa6.94□□□□□ -1.3
SMCO3-201ENST00000316048 ARMC2Q8NEN0 867 aa6.94□□□□□ -1.3
SMCO3-201ENST00000316048 NKX2-3Q8TAU0 364 aa6.94□□□□□ -1.3
SMCO3-201ENST00000316048 FAM196BA6NMK8 535 aa6.94□□□□□ -1.3
SMCO3-201ENST00000316048 RASA1P20936 1047 aa6.94□□□□□ -1.3
SMCO3-201ENST00000316048 PTPN5P54829 565 aa6.94□□□□□ -1.3
SMCO3-201ENST00000316048 CLDN10P78369 228 aa6.94□□□□□ -1.3
SMCO3-201ENST00000316048 C4orf48Q5BLP8 95 aa6.94□□□□□ -1.3
SMCO3-201ENST00000316048 TRAF7Q6Q0C0 670 aa6.94□□□□□ -1.3
SMCO3-201ENST00000316048 GPKOWQ92917 476 aaPredicted RBP eCLIP6.94□□□□□ -1.3
SMCO3-201ENST00000316048 FOXJ1Q92949 421 aa6.94□□□□□ -1.3
SMCO3-201ENST00000316048 ZNF594Q96JF6 807 aaPredicted RBP6.94□□□□□ -1.3
SMCO3-201ENST00000316048 CCDC85AQ96PX6 553 aaPredicted RBP6.94□□□□□ -1.3
SMCO3-201ENST00000316048 FAM69CQ0P6D2 419 aa6.93□□□□□ -1.3
SMCO3-201ENST00000316048 TJAP1Q5JTD0 557 aa6.93□□□□□ -1.3
SMCO3-201ENST00000316048 SH3RF1Q7Z6J0 888 aa6.93□□□□□ -1.3
SMCO3-201ENST00000316048 ZBTB33Q86T24 672 aa6.93□□□□□ -1.3
SMCO3-201ENST00000316048 BAP1Q92560 729 aa6.92□□□□□ -1.3
SMCO3-201ENST00000316048 SLC6A16Q9GZN6 736 aa6.92□□□□□ -1.3
SMCO3-201ENST00000316048 KIAA1024Q9UPX6 916 aa6.92□□□□□ -1.3
SMCO3-201ENST00000316048 S1PR4O95977 384 aa6.92□□□□□ -1.3
SMCO3-201ENST00000316048 CHIC2Q9UKJ5 165 aa6.92□□□□□ -1.3
SMCO3-201ENST00000316048 PATL2C9JE40 543 aaKnown RBP6.91□□□□□ -1.3
SMCO3-201ENST00000316048 ERFEQ4G0M1 354 aa6.91□□□□□ -1.3
SMCO3-201ENST00000316048 OGFOD1Q8N543 542 aa6.91□□□□□ -1.3
SMCO3-201ENST00000316048 FCF1Q9Y324 198 aaKnown RBP6.91□□□□□ -1.3
SMCO3-201ENST00000316048 GIGYF1O75420 1035 aaPredicted RBP6.91□□□□□ -1.3
SMCO3-201ENST00000316048 DZIP3Q86Y13 1208 aaKnown RBP6.91□□□□□ -1.3
SMCO3-201ENST00000316048 CDCA7Q9BWT1 371 aaPredicted RBP6.91□□□□□ -1.3
SMCO3-201ENST00000316048 DPYDQ12882 1025 aa6.9□□□□□ -1.3
SMCO3-201ENST00000316048 OXLD1Q5BKU9 147 aa6.9□□□□□ -1.3
SMCO3-201ENST00000316048 SND1Q7KZF4 910 aaKnown RBP eCLIP6.9□□□□□ -1.3
SMCO3-201ENST00000316048 ATP5J2-PTCD1G3V325 749 aa6.89□□□□□ -1.31
SMCO3-201ENST00000316048 LGR5O75473 907 aa6.89□□□□□ -1.31
SMCO3-201ENST00000316048 AGERQ15109 404 aa6.89□□□□□ -1.31
SMCO3-201ENST00000316048 LARP1Q6PKG0 1096 aaKnown RBP6.89□□□□□ -1.31
SMCO3-201ENST00000316048 ANKMY2Q8IV38 441 aa6.89□□□□□ -1.31
SMCO3-201ENST00000316048 SSFA2P28290 1259 aa6.89□□□□□ -1.31
SMCO3-201ENST00000316048 EML3Q32P44 896 aa6.89□□□□□ -1.31
SMCO3-201ENST00000316048 ZNF511Q8NB15 262 aa6.89□□□□□ -1.31
SMCO3-201ENST00000316048 FAM200AQ8TCP9 573 aa6.89□□□□□ -1.31
SMCO3-201ENST00000316048 IL21Q9HBE4 155 aa6.89□□□□□ -1.31
SMCO3-201ENST00000316048 DOLKQ9UPQ8 538 aa6.89□□□□□ -1.31
SMCO3-201ENST00000316048 PPEF1O14829 653 aaPredicted RBP6.88□□□□□ -1.31
SMCO3-201ENST00000316048 DKK1O94907 266 aa6.88□□□□□ -1.31
SMCO3-201ENST00000316048 CCDC27Q2M243 656 aa6.88□□□□□ -1.31
SMCO3-201ENST00000316048 TXNDC2Q86VQ3 553 aa6.88□□□□□ -1.31
SMCO3-201ENST00000316048 GNEQ9Y223 722 aaKnown RBP6.88□□□□□ -1.31
SMCO3-201ENST00000316048 MYT1LQ9UL68 1186 aa6.88□□□□□ -1.31
SMCO3-201ENST00000316048 SERPINB4P48594 390 aa6.87□□□□□ -1.31
SMCO3-201ENST00000316048 RBM25P49756 843 aaKnown RBP6.87□□□□□ -1.31
SMCO3-201ENST00000316048 DNAAF2Q9NVR5 837 aaKnown RBP6.87□□□□□ -1.31
SMCO3-201ENST00000316048 ZBTB7BO15156 539 aaPredicted RBP6.86□□□□□ -1.31
SMCO3-201ENST00000316048 MAP7D1Q3KQU3 841 aa6.86□□□□□ -1.31
SMCO3-201ENST00000316048 NYAP1Q6ZVC0 841 aa6.86□□□□□ -1.31
SMCO3-201ENST00000316048 RAB15P59190 212 aa6.86□□□□□ -1.31
SMCO3-201ENST00000316048 MCCD1P59942 119 aaPredicted RBP6.86□□□□□ -1.31
SMCO3-201ENST00000316048 SH3BP2P78314 561 aa6.86□□□□□ -1.31
SMCO3-201ENST00000316048 GTF2IP78347 998 aa6.86□□□□□ -1.31
SMCO3-201ENST00000316048 BPHLQ86WA6 291 aaPredicted RBP6.86□□□□□ -1.31
SMCO3-201ENST00000316048 CLP1Q92989 425 aaKnown RBP6.86□□□□□ -1.31
SMCO3-201ENST00000316048 NOD1Q9Y239 953 aa6.86□□□□□ -1.31
SMCO3-201ENST00000316048 ATP2B4P23634 1241 aa6.85□□□□□ -1.31
SMCO3-201ENST00000316048 ZNF592Q92610 1267 aa6.85□□□□□ -1.31
SMCO3-201ENST00000316048 SLC10A4Q96EP9 437 aa6.85□□□□□ -1.31
SMCO3-201ENST00000316048 SFI1A8K8P3 1242 aa6.85□□□□□ -1.31
SMCO3-201ENST00000316048 PRMT3O60678 531 aa6.85□□□□□ -1.31
SMCO3-201ENST00000316048 PLA2G2CQ5R387 149 aa6.85□□□□□ -1.31
SMCO3-201ENST00000316048 B4GALNT3Q6L9W6 998 aa6.85□□□□□ -1.31
SMCO3-201ENST00000316048 C1QTNF2Q9BXJ5 285 aa6.85□□□□□ -1.31
SMCO3-201ENST00000316048 TPCN2Q8NHX9 752 aa6.84□□□□□ -1.31
SMCO3-201ENST00000316048 LZTS3O60299 673 aaPredicted RBP6.83□□□□□ -1.32
SMCO3-201ENST00000316048 SIX5Q8N196 739 aa6.83□□□□□ -1.32
SMCO3-201ENST00000316048 GAS2L2Q8NHY3 880 aa6.83□□□□□ -1.32
SMCO3-201ENST00000316048 PRIMPOLQ96LW4 560 aa6.83□□□□□ -1.32
SMCO3-201ENST00000316048 PCDHB11Q9Y5F2 797 aa6.83□□□□□ -1.32
SMCO3-201ENST00000316048 PCDHGA11Q9Y5H2 935 aa6.83□□□□□ -1.32
SMCO3-201ENST00000316048 SCTRP47872 440 aa6.83□□□□□ -1.32
SMCO3-201ENST00000316048 CCDC102BQ68D86 513 aa6.83□□□□□ -1.32
SMCO3-201ENST00000316048 CCER1Q8TC90 406 aaPredicted RBP6.83□□□□□ -1.32
SMCO3-201ENST00000316048 ESPNB1AK53 854 aa6.82□□□□□ -1.32
SMCO3-201ENST00000316048 ATP1A2P50993 1020 aa6.82□□□□□ -1.32
SMCO3-201ENST00000316048 PSME1Q06323 249 aa6.82□□□□□ -1.32
SMCO3-201ENST00000316048 TRIM50Q86XT4 487 aa6.82□□□□□ -1.32
SMCO3-201ENST00000316048 LARGE2Q8N3Y3 721 aa6.82□□□□□ -1.32
SMCO3-201ENST00000316048 STAU1O95793 577 aaKnown RBP6.82□□□□□ -1.32
SMCO3-201ENST00000316048 OCLNQ16625 522 aa6.82□□□□□ -1.32
SMCO3-201ENST00000316048 SWI5Q1ZZU3 235 aa6.82□□□□□ -1.32
SMCO3-201ENST00000316048 SKOR1P84550 965 aa6.81□□□□□ -1.32
SMCO3-201ENST00000316048 NBPF20Q3BBV1 942 aa6.81□□□□□ -1.32
SMCO3-201ENST00000316048 NOM1Q5C9Z4 860 aaKnown RBP6.81□□□□□ -1.32
SMCO3-201ENST00000316048 PCDH10Q9P2E7 1040 aa6.81□□□□□ -1.32
SMCO3-201ENST00000316048 RNF223E7ERA6 249 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms