RNA–Protein interactions for RNA: ENST00000314289.12

RNF4-201, Transcript of ring finger protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF4, Length 3,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF4-201ENST00000314289 EIF4A2Q14240 407 aaKnown RBP15.96■□□□□ 0.15
RNF4-201ENST00000314289 C14orf37Q86TY3 774 aa15.96■□□□□ 0.15
RNF4-201ENST00000314289 NFE2L2Q16236 605 aa15.96■□□□□ 0.14
RNF4-201ENST00000314289 FTSJ3Q8IY81 847 aaKnown RBP15.95■□□□□ 0.14
RNF4-201ENST00000314289 AKAP12Q02952 1782 aa15.95■□□□□ 0.14
RNF4-201ENST00000314289 PCDHB15Q9Y5E8 787 aa15.94■□□□□ 0.14
RNF4-201ENST00000314289 AATKQ6ZMQ8 1374 aa15.94■□□□□ 0.14
RNF4-201ENST00000314289 BACH2Q9BYV9 841 aa15.94■□□□□ 0.14
RNF4-201ENST00000314289 NOB1Q9ULX3 412 aaKnown RBP15.94■□□□□ 0.14
RNF4-201ENST00000314289 TSPYL6Q8N831 410 aa15.93■□□□□ 0.14
RNF4-201ENST00000314289 ZKSCAN2Q63HK3 967 aa15.93■□□□□ 0.14
RNF4-201ENST00000314289 ANKLE2Q86XL3 938 aa15.93■□□□□ 0.14
RNF4-201ENST00000314289 CDK12Q9NYV4 1490 aaPredicted RBP15.93■□□□□ 0.14
RNF4-201ENST00000314289 TRIM27P14373 513 aa15.93■□□□□ 0.14
RNF4-201ENST00000314289 NLRP6P59044 892 aa15.92■□□□□ 0.14
RNF4-201ENST00000314289 CEP170BQ9Y4F5 1589 aaPredicted RBP15.92■□□□□ 0.14
RNF4-201ENST00000314289 MAP3K19Q56UN5 1328 aa15.91■□□□□ 0.14
RNF4-201ENST00000314289 ITPRIPQ8IWB1 547 aa15.91■□□□□ 0.14
RNF4-201ENST00000314289 DZIP1LQ8IYY4 767 aaKnown RBP15.91■□□□□ 0.14
RNF4-201ENST00000314289 DIP2AQ14689 1571 aa15.91■□□□□ 0.14
RNF4-201ENST00000314289 NCBP3Q53F19 620 aaKnown RBP15.9■□□□□ 0.14
RNF4-201ENST00000314289 MCM10Q7L590 875 aa15.9■□□□□ 0.14
RNF4-201ENST00000314289 MBIPQ9NS73 344 aa15.9■□□□□ 0.14
RNF4-201ENST00000314289 OVOS2A0A0J9YW53 1432 aa15.9■□□□□ 0.14
RNF4-201ENST00000314289 OVOS2Q6IE36 1432 aa15.9■□□□□ 0.14
RNF4-201ENST00000314289 PTCH1Q13635 1447 aa15.89■□□□□ 0.13
RNF4-201ENST00000314289 MS4A1P11836 297 aa15.89■□□□□ 0.13
RNF4-201ENST00000314289 LTV1Q96GA3 475 aaPredicted RBP15.89■□□□□ 0.13
RNF4-201ENST00000314289 IL16Q14005 1332 aa15.89■□□□□ 0.13
RNF4-201ENST00000314289 TOPAZ1Q8N9V7 1692 aa15.89■□□□□ 0.13
RNF4-201ENST00000314289 ZBTB7CA1YPR0 619 aa15.88■□□□□ 0.13
RNF4-201ENST00000314289 AMPHP49418 695 aa15.88■□□□□ 0.13
RNF4-201ENST00000314289 MVPQ14764 893 aaKnown RBP15.88■□□□□ 0.13
RNF4-201ENST00000314289 ABTB2Q8N961 1025 aa15.88■□□□□ 0.13
RNF4-201ENST00000314289 FOXO3O43524 673 aa15.88■□□□□ 0.13
RNF4-201ENST00000314289 XPCQ01831 940 aaPredicted RBP15.88■□□□□ 0.13
RNF4-201ENST00000314289 KRT24Q2M2I5 525 aa15.88■□□□□ 0.13
RNF4-201ENST00000314289 ATF7IPQ6VMQ6 1270 aa15.87■□□□□ 0.13
RNF4-201ENST00000314289 TMEM57Q8N5G2 664 aa15.87■□□□□ 0.13
RNF4-201ENST00000314289 C8orf58Q8NAV2 365 aa15.87■□□□□ 0.13
RNF4-201ENST00000314289 NRKQ7Z2Y5 1582 aa15.87■□□□□ 0.13
RNF4-201ENST00000314289 RTN4Q9NQC3 1192 aaKnown RBP15.86■□□□□ 0.13
RNF4-201ENST00000314289 MIS18AQ9NYP9 233 aa15.86■□□□□ 0.13
RNF4-201ENST00000314289 SSH2Q76I76 1423 aa15.86■□□□□ 0.13
RNF4-201ENST00000314289 ESCO1Q5FWF5 840 aa15.86■□□□□ 0.13
RNF4-201ENST00000314289 PEAK1Q9H792 1746 aa15.85■□□□□ 0.13
RNF4-201ENST00000314289 VAMP4O75379 141 aa15.85■□□□□ 0.13
RNF4-201ENST00000314289 IL27Q8NEV9 243 aa15.85■□□□□ 0.13
RNF4-201ENST00000314289 DLG5Q8TDM6 1919 aa15.84■□□□□ 0.13
RNF4-201ENST00000314289 CT47B1P0C2W7 299 aaPredicted RBP15.84■□□□□ 0.13
RNF4-201ENST00000314289 GNAI1P63096 354 aa15.84■□□□□ 0.13
RNF4-201ENST00000314289 TTC21AQ8NDW8 1320 aa15.84■□□□□ 0.13
RNF4-201ENST00000314289 XRN1Q8IZH2 1706 aaKnown RBP15.83■□□□□ 0.13
RNF4-201ENST00000314289 TWISTNBQ3B726 338 aaPredicted RBP15.83■□□□□ 0.12
RNF4-201ENST00000314289 ANO8Q9HCE9 1232 aaPredicted RBP15.83■□□□□ 0.12
RNF4-201ENST00000314289 IFT57Q9NWB7 429 aa15.83■□□□□ 0.12
RNF4-201ENST00000314289 C8orf34Q49A92 452 aa15.83■□□□□ 0.12
RNF4-201ENST00000314289 EYA1Q99502 592 aa15.83■□□□□ 0.12
RNF4-201ENST00000314289 PHF8Q9UPP1 1060 aa15.83■□□□□ 0.12
RNF4-201ENST00000314289 LMOD2Q6P5Q4 547 aa15.82■□□□□ 0.12
RNF4-201ENST00000314289 USHBP1Q8N6Y0 703 aa15.82■□□□□ 0.12
RNF4-201ENST00000314289 CFAP44Q96MT7 982 aa15.82■□□□□ 0.12
RNF4-201ENST00000314289 USP31Q70CQ4 1352 aa15.82■□□□□ 0.12
RNF4-201ENST00000314289 SETD1BQ9UPS6 1966 aaKnown RBP15.82■□□□□ 0.12
RNF4-201ENST00000314289 ZNF853P0CG23 659 aa15.81■□□□□ 0.12
RNF4-201ENST00000314289 ORAI2Q96SN7 254 aa15.81■□□□□ 0.12
RNF4-201ENST00000314289 MTHFSDQ2M296 383 aaKnown RBP15.81■□□□□ 0.12
RNF4-201ENST00000314289 C1orf115Q9H7X2 142 aa15.81■□□□□ 0.12
RNF4-201ENST00000314289 CALD1Q05682 793 aaKnown RBP15.81■□□□□ 0.12
RNF4-201ENST00000314289 FAM161AQ3B820 660 aa15.81■□□□□ 0.12
RNF4-201ENST00000314289 PDZRN3Q9UPQ7 1066 aa15.81■□□□□ 0.12
RNF4-201ENST00000314289 PSME1Q06323 249 aa15.8■□□□□ 0.12
RNF4-201ENST00000314289 LMOD3Q0VAK6 560 aa15.8■□□□□ 0.12
RNF4-201ENST00000314289 KIF16BQ96L93 1317 aa15.8■□□□□ 0.12
RNF4-201ENST00000314289 PIK3C2AO00443 1686 aa15.79■□□□□ 0.12
RNF4-201ENST00000314289 FLT4P35916 1363 aa15.79■□□□□ 0.12
RNF4-201ENST00000314289 IPO8O15397 1037 aaKnown RBP15.79■□□□□ 0.12
RNF4-201ENST00000314289 MRPL50Q8N5N7 158 aaKnown RBP15.79■□□□□ 0.12
RNF4-201ENST00000314289 RWDD1Q9H446 243 aaPredicted RBP15.79■□□□□ 0.12
RNF4-201ENST00000314289 DDX19BQ9UMR2 479 aa15.79■□□□□ 0.12
RNF4-201ENST00000314289 HOXC9P31274 260 aa15.78■□□□□ 0.12
RNF4-201ENST00000314289 SLC4A3P48751 1232 aa15.78■□□□□ 0.12
RNF4-201ENST00000314289 ALDH1L2Q3SY69 923 aa15.78■□□□□ 0.12
RNF4-201ENST00000314289 SBNO1A3KN83 1393 aa15.78■□□□□ 0.12
RNF4-201ENST00000314289 PIK3R4Q99570 1358 aa15.77■□□□□ 0.12
RNF4-201ENST00000314289 NALCNQ8IZF0 1738 aa15.77■□□□□ 0.12
RNF4-201ENST00000314289 SEC24BO95487 1268 aa15.76■□□□□ 0.11
RNF4-201ENST00000314289 ADAMTSL3P82987 1691 aa15.76■□□□□ 0.11
RNF4-201ENST00000314289 CHD2O14647 1828 aaKnown RBP15.76■□□□□ 0.11
RNF4-201ENST00000314289 NPHP4O75161 1426 aaPredicted RBP15.75■□□□□ 0.11
RNF4-201ENST00000314289 ZBTB40Q9NUA8 1239 aa15.75■□□□□ 0.11
RNF4-201ENST00000314289 FMN2Q9NZ56 1722 aa15.75■□□□□ 0.11
RNF4-201ENST00000314289 ANKARQ7Z5J8 1434 aa15.75■□□□□ 0.11
RNF4-201ENST00000314289 PRKCSHP14314 528 aaPredicted RBP15.75■□□□□ 0.11
RNF4-201ENST00000314289 RTF1Q92541 710 aaKnown RBP15.75■□□□□ 0.11
RNF4-201ENST00000314289 DNAJC5Q9H3Z4 198 aa15.75■□□□□ 0.11
RNF4-201ENST00000314289 PROSER2Q86WR7 435 aaPredicted RBP15.74■□□□□ 0.11
RNF4-201ENST00000314289 NECTIN2Q92692 538 aa15.74■□□□□ 0.11
RNF4-201ENST00000314289 DDX17Q92841 729 aaKnown RBP15.73■□□□□ 0.11
RNF4-201ENST00000314289 CHL1O00533 1208 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 231.2 ms