RNA–Protein interactions for RNA: ENST00000314045.11

DDX54-202, Transcript of DEAD-box helicase 54, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene DDX54, Length 4,380 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-202ENST00000314045 NKTRP30414 1462 aaKnown RBP16.81■□□□□ 0.28
DDX54-202ENST00000314045 CLASP1Q7Z460 1538 aa16.81■□□□□ 0.28
DDX54-202ENST00000314045 FAM83GA6ND36 823 aa16.81■□□□□ 0.28
DDX54-202ENST00000314045 CHRNA2Q15822 529 aa16.81■□□□□ 0.28
DDX54-202ENST00000314045 MYL6BP14649 208 aa16.81■□□□□ 0.28
DDX54-202ENST00000314045 SLC4A3P48751 1232 aa16.81■□□□□ 0.28
DDX54-202ENST00000314045 NPHP3Q7Z494 1330 aa16.81■□□□□ 0.28
DDX54-202ENST00000314045 FOXD4L1Q9NU39 408 aa16.8■□□□□ 0.28
DDX54-202ENST00000314045 RUFY2Q8WXA3 655 aa16.8■□□□□ 0.28
DDX54-202ENST00000314045 ADCY10Q96PN6 1610 aa16.79■□□□□ 0.28
DDX54-202ENST00000314045 KDM5DQ9BY66 1539 aa16.79■□□□□ 0.28
DDX54-202ENST00000314045 ALDH1L2Q3SY69 923 aa16.79■□□□□ 0.28
DDX54-202ENST00000314045 CLASRPQ8N2M8 674 aaKnown RBP16.79■□□□□ 0.28
DDX54-202ENST00000314045 GCC1Q96CN9 775 aa16.79■□□□□ 0.28
DDX54-202ENST00000314045 TSPOAP1O95153 1857 aa16.79■□□□□ 0.28
DDX54-202ENST00000314045 ARAP3Q8WWN8 1544 aa16.79■□□□□ 0.28
DDX54-202ENST00000314045 PLA2R1Q13018 1463 aa16.79■□□□□ 0.28
DDX54-202ENST00000314045 ADAMTS2O95450 1211 aa16.79■□□□□ 0.28
DDX54-202ENST00000314045 ANKRD24Q8TF21 1146 aa16.79■□□□□ 0.28
DDX54-202ENST00000314045 EIF4A2Q14240 407 aaKnown RBP16.79■□□□□ 0.28
DDX54-202ENST00000314045 AEBP1Q8IUX7 1158 aa16.79■□□□□ 0.28
DDX54-202ENST00000314045 GBP4Q96PP9 640 aa16.78■□□□□ 0.28
DDX54-202ENST00000314045 PTPRTO14522 1441 aa16.78■□□□□ 0.28
DDX54-202ENST00000314045 G3V3G9 751 aa16.77■□□□□ 0.28
DDX54-202ENST00000314045 DCAF8Q5TAQ9 597 aa16.77■□□□□ 0.28
DDX54-202ENST00000314045 NEUROD6Q96NK8 337 aa16.77■□□□□ 0.28
DDX54-202ENST00000314045 PIK3C2GO75747 1445 aa16.77■□□□□ 0.28
DDX54-202ENST00000314045 UGGT1Q9NYU2 1555 aa16.77■□□□□ 0.28
DDX54-202ENST00000314045 ANO2Q9NQ90 1003 aa16.77■□□□□ 0.28
DDX54-202ENST00000314045 NPC1L1Q9UHC9 1359 aa16.77■□□□□ 0.28
DDX54-202ENST00000314045 ERC2O15083 957 aa16.77■□□□□ 0.27
DDX54-202ENST00000314045 PTCD1O75127 700 aaKnown RBP16.77■□□□□ 0.27
DDX54-202ENST00000314045 HECW2Q9P2P5 1572 aa16.76■□□□□ 0.27
DDX54-202ENST00000314045 FAM177BA6PVY3 158 aa16.76■□□□□ 0.27
DDX54-202ENST00000314045 KIF6Q6ZMV9 814 aa16.76■□□□□ 0.27
DDX54-202ENST00000314045 TRIM44Q96DX7 344 aaPredicted RBP16.76■□□□□ 0.27
DDX54-202ENST00000314045 INTS3Q68E01 1043 aaKnown RBP16.76■□□□□ 0.27
DDX54-202ENST00000314045 IL16Q14005 1332 aa16.76■□□□□ 0.27
DDX54-202ENST00000314045 LRRFIP1Q32MZ4 808 aaKnown RBP16.75■□□□□ 0.27
DDX54-202ENST00000314045 ISY1Q9ULR0 285 aaKnown RBP16.75■□□□□ 0.27
DDX54-202ENST00000314045 TOMM22Q9NS69 142 aa16.75■□□□□ 0.27
DDX54-202ENST00000314045 MBIPQ9NS73 344 aa16.75■□□□□ 0.27
DDX54-202ENST00000314045 HSP90B1P14625 803 aaKnown RBP16.75■□□□□ 0.27
DDX54-202ENST00000314045 TRPM2O94759 1503 aa16.74■□□□□ 0.27
DDX54-202ENST00000314045 MAP3K19Q56UN5 1328 aa16.73■□□□□ 0.27
DDX54-202ENST00000314045 GCP02774 474 aa16.73■□□□□ 0.27
DDX54-202ENST00000314045 CABLES1Q8TDN4 633 aa16.73■□□□□ 0.27
DDX54-202ENST00000314045 PRDM15P57071 1507 aaPredicted RBP16.73■□□□□ 0.27
DDX54-202ENST00000314045 CDC45O75419 566 aa16.73■□□□□ 0.27
DDX54-202ENST00000314045 TRIM27P14373 513 aa16.73■□□□□ 0.27
DDX54-202ENST00000314045 CCDC27Q2M243 656 aa16.73■□□□□ 0.27
DDX54-202ENST00000314045 RPAP2Q8IXW5 612 aaPredicted RBP16.73■□□□□ 0.27
DDX54-202ENST00000314045 SIRT1Q96EB6 747 aa16.73■□□□□ 0.27
DDX54-202ENST00000314045 ORAI2Q96SN7 254 aa16.73■□□□□ 0.27
DDX54-202ENST00000314045 FLT4P35916 1363 aa16.72■□□□□ 0.27
DDX54-202ENST00000314045 SBNO2Q9Y2G9 1366 aa16.72■□□□□ 0.27
DDX54-202ENST00000314045 GNL2Q13823 731 aaKnown RBP16.72■□□□□ 0.27
DDX54-202ENST00000314045 C22orf23Q9BZE7 217 aa16.72■□□□□ 0.27
DDX54-202ENST00000314045 PLEKHH1Q9ULM0 1364 aa16.72■□□□□ 0.27
DDX54-202ENST00000314045 ZKSCAN1P17029 563 aaPredicted RBP16.72■□□□□ 0.27
DDX54-202ENST00000314045 IFNL2Q8IZJ0 200 aa16.71■□□□□ 0.27
DDX54-202ENST00000314045 PHACTR3Q96KR7 559 aa16.71■□□□□ 0.27
DDX54-202ENST00000314045 F6X3S4 739 aa16.71■□□□□ 0.27
DDX54-202ENST00000314045 SRGAP3O43295 1099 aa16.71■□□□□ 0.27
DDX54-202ENST00000314045 PLCB2Q00722 1185 aa16.71■□□□□ 0.27
DDX54-202ENST00000314045 PLXNC1O60486 1568 aa16.7■□□□□ 0.26
DDX54-202ENST00000314045 TMOD3Q9NYL9 352 aa16.7■□□□□ 0.26
DDX54-202ENST00000314045 PTMAP06454 111 aaKnown RBP16.7■□□□□ 0.26
DDX54-202ENST00000314045 VPS37DQ86XT2 251 aa16.7■□□□□ 0.26
DDX54-202ENST00000314045 EYA1Q99502 592 aa16.7■□□□□ 0.26
DDX54-202ENST00000314045 EDC4Q6P2E9 1401 aaKnown RBP16.69■□□□□ 0.26
DDX54-202ENST00000314045 PLEKHG3A1L390 1219 aa16.69■□□□□ 0.26
DDX54-202ENST00000314045 METP08581 1390 aa16.69■□□□□ 0.26
DDX54-202ENST00000314045 ZFYVE9O95405 1425 aa16.69■□□□□ 0.26
DDX54-202ENST00000314045 CHD1LQ86WJ1 897 aa16.69■□□□□ 0.26
DDX54-202ENST00000314045 LRRC59Q96AG4 307 aaKnown RBP16.69■□□□□ 0.26
DDX54-202ENST00000314045 NGLY1Q96IV0 654 aa16.69■□□□□ 0.26
DDX54-202ENST00000314045 LRRCC1Q9C099 1032 aa16.69■□□□□ 0.26
DDX54-202ENST00000314045 ERC1Q8IUD2 1116 aa16.68■□□□□ 0.26
DDX54-202ENST00000314045 GZF1Q9H116 711 aaPredicted RBP16.68■□□□□ 0.26
DDX54-202ENST00000314045 SIL1Q9H173 461 aa16.68■□□□□ 0.26
DDX54-202ENST00000314045 DBF4Q9UBU7 674 aaPredicted RBP16.68■□□□□ 0.26
DDX54-202ENST00000314045 ABCC3O15438 1527 aa16.68■□□□□ 0.26
DDX54-202ENST00000314045 STARD3NLO95772 234 aa16.68■□□□□ 0.26
DDX54-202ENST00000314045 ERVK-7P63135 1459 aa16.67■□□□□ 0.26
DDX54-202ENST00000314045 EXOC5O00471 708 aa16.67■□□□□ 0.26
DDX54-202ENST00000314045 EFCAB6Q5THR3 1501 aa16.67■□□□□ 0.26
DDX54-202ENST00000314045 FLIIQ13045 1269 aa16.67■□□□□ 0.26
DDX54-202ENST00000314045 MTHFSDQ2M296 383 aaKnown RBP16.67■□□□□ 0.26
DDX54-202ENST00000314045 APPP05067 770 aa16.66■□□□□ 0.26
DDX54-202ENST00000314045 CDC42BPBQ9Y5S2 1711 aa16.66■□□□□ 0.26
DDX54-202ENST00000314045 MYOM2P54296 1465 aa16.66■□□□□ 0.26
DDX54-202ENST00000314045 LARP1Q6PKG0 1096 aaKnown RBP16.66■□□□□ 0.26
DDX54-202ENST00000314045 CNTROBQ8N137 903 aa16.66■□□□□ 0.26
DDX54-202ENST00000314045 BACH2Q9BYV9 841 aa16.66■□□□□ 0.26
DDX54-202ENST00000314045 HOXC9P31274 260 aa16.66■□□□□ 0.26
DDX54-202ENST00000314045 FOXD4L5Q5VV16 416 aaPredicted RBP16.66■□□□□ 0.26
DDX54-202ENST00000314045 FOXD4L4Q8WXT5 416 aaPredicted RBP16.66■□□□□ 0.26
DDX54-202ENST00000314045 EXOC6BQ9Y2D4 811 aa16.66■□□□□ 0.26
DDX54-202ENST00000314045 TOM1O60784 492 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms