RNA–Protein interactions for RNA: ENST00000309190.9

CAST-201, Transcript of calpastatin, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CAST, Length 4,282 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-201ENST00000309190 PTPRTO14522 1441 aa6.43□□□□□ -1.38
CAST-201ENST00000309190 SIGLEC1Q9BZZ2 1709 aa6.43□□□□□ -1.38
CAST-201ENST00000309190 PPP1R1BQ9UD71 204 aaPredicted RBP6.43□□□□□ -1.38
CAST-201ENST00000309190 MAP3K19Q56UN5 1328 aa6.43□□□□□ -1.38
CAST-201ENST00000309190 B4GALNT3Q6L9W6 998 aa6.43□□□□□ -1.38
CAST-201ENST00000309190 BRD4O60885 1362 aaPredicted RBP6.43□□□□□ -1.38
CAST-201ENST00000309190 KDM5AP29375 1690 aaKnown RBP6.43□□□□□ -1.38
CAST-201ENST00000309190 RTF1Q92541 710 aaKnown RBP6.42□□□□□ -1.38
CAST-201ENST00000309190 RBM42Q9BTD8 480 aaKnown RBP6.42□□□□□ -1.38
CAST-201ENST00000309190 PTPRUQ92729 1446 aa6.42□□□□□ -1.38
CAST-201ENST00000309190 SETBP1Q9Y6X0 1596 aa6.42□□□□□ -1.38
CAST-201ENST00000309190 EFCAB6Q5THR3 1501 aa6.42□□□□□ -1.38
CAST-201ENST00000309190 LARP1Q6PKG0 1096 aaKnown RBP6.42□□□□□ -1.38
CAST-201ENST00000309190 RAPGEF4Q8WZA2 1011 aa6.42□□□□□ -1.38
CAST-201ENST00000309190 CCDC85AQ96PX6 553 aaPredicted RBP6.42□□□□□ -1.38
CAST-201ENST00000309190 SCAF11Q99590 1463 aaKnown RBP6.41□□□□□ -1.38
CAST-201ENST00000309190 SPINK5Q9NQ38 1064 aaPredicted RBP6.41□□□□□ -1.38
CAST-201ENST00000309190 KDM2BQ8NHM5 1336 aa6.41□□□□□ -1.38
CAST-201ENST00000309190 MYBBP1AQ9BQG0 1328 aaKnown RBP6.41□□□□□ -1.38
CAST-201ENST00000309190 SETD1AO15047 1707 aaKnown RBP6.41□□□□□ -1.38
CAST-201ENST00000309190 NBPF6Q5VWK0 638 aa6.41□□□□□ -1.38
CAST-201ENST00000309190 PIAS4Q8N2W9 510 aaPredicted RBP6.41□□□□□ -1.38
CAST-201ENST00000309190 CCDC24Q8N4L8 307 aa6.41□□□□□ -1.38
CAST-201ENST00000309190 ANKRD24Q8TF21 1146 aa6.41□□□□□ -1.38
CAST-201ENST00000309190 NBPF4Q96M43 638 aa6.41□□□□□ -1.38
CAST-201ENST00000309190 RICTORQ6R327 1708 aa6.41□□□□□ -1.38
CAST-201ENST00000309190 ARHGEF28Q8N1W1 1705 aaKnown RBP6.41□□□□□ -1.38
CAST-201ENST00000309190 NPHP1O15259 732 aa6.4□□□□□ -1.38
CAST-201ENST00000309190 LMTK2Q8IWU2 1503 aa6.4□□□□□ -1.38
CAST-201ENST00000309190 ZNF530Q6P9A1 599 aaPredicted RBP6.4□□□□□ -1.38
CAST-201ENST00000309190 MYL6BP14649 208 aa6.4□□□□□ -1.39
CAST-201ENST00000309190 EYA1Q99502 592 aa6.4□□□□□ -1.39
CAST-201ENST00000309190 BCAR3O75815 825 aa6.39□□□□□ -1.39
CAST-201ENST00000309190 EIF4A2Q14240 407 aaKnown RBP6.39□□□□□ -1.39
CAST-201ENST00000309190 TNNQ9UQP3 1299 aa6.39□□□□□ -1.39
CAST-201ENST00000309190 ADGRB1O14514 1584 aa6.39□□□□□ -1.39
CAST-201ENST00000309190 CAMSAP1Q5T5Y3 1602 aa6.39□□□□□ -1.39
CAST-201ENST00000309190 TEFQ10587 303 aa6.39□□□□□ -1.39
CAST-201ENST00000309190 RALBP1Q15311 655 aa6.39□□□□□ -1.39
CAST-201ENST00000309190 LGR6Q9HBX8 967 aa6.39□□□□□ -1.39
CAST-201ENST00000309190 MYOM2P54296 1465 aa6.39□□□□□ -1.39
CAST-201ENST00000309190 BICDL1Q6ZP65 573 aa6.39□□□□□ -1.39
CAST-201ENST00000309190 ADAMTS13Q76LX8 1427 aa6.38□□□□□ -1.39
CAST-201ENST00000309190 ZNF692Q9BU19 519 aaPredicted RBP6.38□□□□□ -1.39
CAST-201ENST00000309190 ADAMTSL3P82987 1691 aa6.38□□□□□ -1.39
CAST-201ENST00000309190 ARHGEF40Q8TER5 1519 aa6.38□□□□□ -1.39
CAST-201ENST00000309190 KIAA0232Q92628 1395 aa6.38□□□□□ -1.39
CAST-201ENST00000309190 NPHP3Q7Z494 1330 aa6.38□□□□□ -1.39
CAST-201ENST00000309190 ADGRB3O60242 1522 aa6.38□□□□□ -1.39
CAST-201ENST00000309190 QRICH2Q9H0J4 1663 aa6.38□□□□□ -1.39
CAST-201ENST00000309190 KCNQ3O43525 872 aa6.38□□□□□ -1.39
CAST-201ENST00000309190 TRMT2AQ8IZ69 625 aaKnown RBP6.38□□□□□ -1.39
CAST-201ENST00000309190 KIF1BO60333 1816 aa6.38□□□□□ -1.39
CAST-201ENST00000309190 PIK3C2GO75747 1445 aa6.38□□□□□ -1.39
CAST-201ENST00000309190 C1orf141Q5JVX7 400 aa6.37□□□□□ -1.39
CAST-201ENST00000309190 PRAMEF22A3QJZ6 481 aa6.37□□□□□ -1.39
CAST-201ENST00000309190 PHF14O94880 888 aa6.37□□□□□ -1.39
CAST-201ENST00000309190 C1orf115Q9H7X2 142 aa6.37□□□□□ -1.39
CAST-201ENST00000309190 PDE3BQ13370 1112 aa6.37□□□□□ -1.39
CAST-201ENST00000309190 PTF1AQ7RTS3 328 aa6.37□□□□□ -1.39
CAST-201ENST00000309190 NFATC2IPQ8NCF5 419 aa6.37□□□□□ -1.39
CAST-201ENST00000309190 NPC1L1Q9UHC9 1359 aa6.37□□□□□ -1.39
CAST-201ENST00000309190 PLEKHG1Q9ULL1 1385 aa6.37□□□□□ -1.39
CAST-201ENST00000309190 EXOSC9Q06265 439 aaKnown RBP6.36□□□□□ -1.39
CAST-201ENST00000309190 PANK1Q8TE04 598 aa6.36□□□□□ -1.39
CAST-201ENST00000309190 ABCC11Q96J66 1382 aa6.36□□□□□ -1.39
CAST-201ENST00000309190 RGS3P49796 1198 aa6.36□□□□□ -1.39
CAST-201ENST00000309190 TSPYL4Q9UJ04 414 aa6.36□□□□□ -1.39
CAST-201ENST00000309190 MTHFSDQ2M296 383 aaKnown RBP6.36□□□□□ -1.39
CAST-201ENST00000309190 C20orf194Q5TEA3 1177 aa6.36□□□□□ -1.39
CAST-201ENST00000309190 COG6Q9Y2V7 657 aa6.36□□□□□ -1.39
CAST-201ENST00000309190 ATAD2Q6PL18 1390 aa6.36□□□□□ -1.39
CAST-201ENST00000309190 CFAP74Q9C0B2 1584 aa6.36□□□□□ -1.39
CAST-201ENST00000309190 N4BP2Q86UW6 1770 aaPredicted RBP6.36□□□□□ -1.39
CAST-201ENST00000309190 F6X3S4 739 aa6.36□□□□□ -1.39
CAST-201ENST00000309190 KCNQ2O43526 872 aa6.36□□□□□ -1.39
CAST-201ENST00000309190 SMC4Q9NTJ3 1288 aa6.36□□□□□ -1.39
CAST-201ENST00000309190 USP21Q9UK80 565 aa6.36□□□□□ -1.39
CAST-201ENST00000309190 CHMP3Q9Y3E7 222 aa6.36□□□□□ -1.39
CAST-201ENST00000309190 CDC42BPGQ6DT37 1551 aa6.35□□□□□ -1.39
CAST-201ENST00000309190 HOXC9P31274 260 aa6.35□□□□□ -1.39
CAST-201ENST00000309190 TSPYL6Q8N831 410 aa6.35□□□□□ -1.39
CAST-201ENST00000309190 SPRYD3Q8NCJ5 442 aa6.35□□□□□ -1.39
CAST-201ENST00000309190 MYO5BQ9ULV0 1848 aa6.35□□□□□ -1.39
CAST-201ENST00000309190 ZNF219Q9P2Y4 722 aaPredicted RBP6.35□□□□□ -1.39
CAST-201ENST00000309190 GOLGA2Q08379 1002 aa6.35□□□□□ -1.39
CAST-201ENST00000309190 STAC3Q96MF2 364 aa6.34□□□□□ -1.39
CAST-201ENST00000309190 QTRT2Q9H974 415 aaKnown RBP6.34□□□□□ -1.39
CAST-201ENST00000309190 ADGRL3Q9HAR2 1447 aa6.34□□□□□ -1.39
CAST-201ENST00000309190 ALKQ9UM73 1620 aa6.34□□□□□ -1.39
CAST-201ENST00000309190 TMPOP42166 694 aaKnown RBP6.34□□□□□ -1.39
CAST-201ENST00000309190 PRIM1P49642 420 aaKnown RBP6.34□□□□□ -1.39
CAST-201ENST00000309190 FTSJ3Q8IY81 847 aaKnown RBP6.34□□□□□ -1.39
CAST-201ENST00000309190 TATP17735 454 aaPredicted RBP6.33□□□□□ -1.4
CAST-201ENST00000309190 CCDC136Q96JN2 1154 aa6.33□□□□□ -1.4
CAST-201ENST00000309190 FER1L4A9Z1Z3 1794 aa6.33□□□□□ -1.4
CAST-201ENST00000309190 ITPRIPQ8IWB1 547 aa6.33□□□□□ -1.4
CAST-201ENST00000309190 CNKSR2Q8WXI2 1034 aa6.33□□□□□ -1.4
CAST-201ENST00000309190 FBXO3Q9UK99 471 aa6.33□□□□□ -1.4
CAST-201ENST00000309190 ASXL1Q8IXJ9 1541 aa6.33□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 75.1 ms