RNA–Protein interactions for RNA: ENST00000306658.7

KRT28-201, Transcript of keratin 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene KRT28, Length 1,685 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT28-201ENST00000306658 GOLGA2Q08379 1002 aa23.06■■□□□ 1.28
KRT28-201ENST00000306658 AEBP2Q6ZN18 517 aaPredicted RBP23.06■■□□□ 1.28
KRT28-201ENST00000306658 SPATA31A3Q5VYP0 1347 aa23.05■■□□□ 1.28
KRT28-201ENST00000306658 HMOX1P09601 288 aa23.05■■□□□ 1.28
KRT28-201ENST00000306658 ARHGEF10O15013 1369 aa23.05■■□□□ 1.28
KRT28-201ENST00000306658 PRKAR2BP31323 418 aa23.04■■□□□ 1.28
KRT28-201ENST00000306658 NEUROD2Q15784 382 aa23.04■■□□□ 1.28
KRT28-201ENST00000306658 CCDC27Q2M243 656 aa23.04■■□□□ 1.28
KRT28-201ENST00000306658 WWC1Q8IX03 1113 aa23.03■■□□□ 1.28
KRT28-201ENST00000306658 IP6K1Q92551 441 aa23.03■■□□□ 1.28
KRT28-201ENST00000306658 CDCA7LQ96GN5 454 aa23.03■■□□□ 1.28
KRT28-201ENST00000306658 LTN1O94822 1766 aa23.03■■□□□ 1.28
KRT28-201ENST00000306658 SOS2Q07890 1332 aaPredicted RBP23.03■■□□□ 1.28
KRT28-201ENST00000306658 RRP7AQ9Y3A4 280 aaKnown RBP23.03■■□□□ 1.28
KRT28-201ENST00000306658 TMPOP42166 694 aaKnown RBP23.02■■□□□ 1.28
KRT28-201ENST00000306658 ARHGEF25Q86VW2 580 aa23.01■■□□□ 1.27
KRT28-201ENST00000306658 PHF23Q9BUL5 403 aaPredicted RBP23.01■■□□□ 1.27
KRT28-201ENST00000306658 PLEKHG5O94827 1062 aa23■■□□□ 1.27
KRT28-201ENST00000306658 SULT6B1Q6IMI4 303 aa23■■□□□ 1.27
KRT28-201ENST00000306658 PHRF1Q9P1Y6 1649 aaKnown RBP22.99■■□□□ 1.27
KRT28-201ENST00000306658 WDR63Q8IWG1 891 aa22.99■■□□□ 1.27
KRT28-201ENST00000306658 SUPT16HQ9Y5B9 1047 aaKnown RBP22.99■■□□□ 1.27
KRT28-201ENST00000306658 RGPD1P0DJD0 1748 aa22.98■■□□□ 1.27
KRT28-201ENST00000306658 ZBTB7CA1YPR0 619 aa22.98■■□□□ 1.27
KRT28-201ENST00000306658 E9PSI1 815 aa22.97■■□□□ 1.27
KRT28-201ENST00000306658 SLFN5Q08AF3 891 aa22.97■■□□□ 1.27
KRT28-201ENST00000306658 MED1Q15648 1581 aaPredicted RBP22.97■■□□□ 1.27
KRT28-201ENST00000306658 RIPK4P57078 832 aa22.97■■□□□ 1.27
KRT28-201ENST00000306658 NHSL1Q5SYE7 1610 aa22.96■■□□□ 1.27
KRT28-201ENST00000306658 NEFLP07196 543 aa22.96■■□□□ 1.27
KRT28-201ENST00000306658 PHACTR3Q96KR7 559 aa22.96■■□□□ 1.27
KRT28-201ENST00000306658 EYA1Q99502 592 aa22.96■■□□□ 1.27
KRT28-201ENST00000306658 IGSF1Q8N6C5 1336 aa22.96■■□□□ 1.27
KRT28-201ENST00000306658 NFE2L2Q16236 605 aa22.95■■□□□ 1.26
KRT28-201ENST00000306658 DUSP27Q5VZP5 1158 aa22.94■■□□□ 1.26
KRT28-201ENST00000306658 AEBP1Q8IUX7 1158 aa22.94■■□□□ 1.26
KRT28-201ENST00000306658 LTV1Q96GA3 475 aaPredicted RBP22.94■■□□□ 1.26
KRT28-201ENST00000306658 ZC3H6P61129 1189 aaKnown RBP22.93■■□□□ 1.26
KRT28-201ENST00000306658 TRMT2AQ8IZ69 625 aaKnown RBP22.93■■□□□ 1.26
KRT28-201ENST00000306658 KDRP35968 1356 aa22.93■■□□□ 1.26
KRT28-201ENST00000306658 CABLES1Q8TDN4 633 aa22.92■■□□□ 1.26
KRT28-201ENST00000306658 TRIM35Q9UPQ4 493 aa22.92■■□□□ 1.26
KRT28-201ENST00000306658 ROBO1Q9Y6N7 1651 aa22.9■■□□□ 1.26
KRT28-201ENST00000306658 TOM1O60784 492 aa22.9■■□□□ 1.26
KRT28-201ENST00000306658 LMOD3Q0VAK6 560 aa22.9■■□□□ 1.26
KRT28-201ENST00000306658 SPINK5Q9NQ38 1064 aaPredicted RBP22.9■■□□□ 1.26
KRT28-201ENST00000306658 RCAN3Q9UKA8 241 aa22.89■■□□□ 1.25
KRT28-201ENST00000306658 CRYBG1Q9Y4K1 1723 aa22.89■■□□□ 1.25
KRT28-201ENST00000306658 LRRC59Q96AG4 307 aaKnown RBP22.88■■□□□ 1.25
KRT28-201ENST00000306658 CPDO75976 1380 aa22.88■■□□□ 1.25
KRT28-201ENST00000306658 IL16Q14005 1332 aa22.88■■□□□ 1.25
KRT28-201ENST00000306658 MYH16Q9H6N6 1097 aa22.87■■□□□ 1.25
KRT28-201ENST00000306658 HAP1P54257 671 aaPredicted RBP22.87■■□□□ 1.25
KRT28-201ENST00000306658 ANKRD24Q8TF21 1146 aa22.87■■□□□ 1.25
KRT28-201ENST00000306658 AXIN2Q9Y2T1 843 aa22.87■■□□□ 1.25
KRT28-201ENST00000306658 CALD1Q05682 793 aaKnown RBP22.86■■□□□ 1.25
KRT28-201ENST00000306658 ABCC6O95255 1503 aa22.85■■□□□ 1.25
KRT28-201ENST00000306658 NBPF6Q5VWK0 638 aa22.85■■□□□ 1.25
KRT28-201ENST00000306658 NBPF4Q96M43 638 aa22.85■■□□□ 1.25
KRT28-201ENST00000306658 AHDC1Q5TGY3 1603 aaPredicted RBP22.85■■□□□ 1.25
KRT28-201ENST00000306658 FKBP8Q14318 412 aa22.84■■□□□ 1.25
KRT28-201ENST00000306658 KIAA0232Q92628 1395 aa22.83■■□□□ 1.25
KRT28-201ENST00000306658 RNF123Q5XPI4 1314 aa22.83■■□□□ 1.25
KRT28-201ENST00000306658 ERBB3P21860 1342 aa22.82■■□□□ 1.24
KRT28-201ENST00000306658 GAS2L2Q8NHY3 880 aa22.82■■□□□ 1.24
KRT28-201ENST00000306658 DLG5Q8TDM6 1919 aa22.82■■□□□ 1.24
KRT28-201ENST00000306658 COL18A1P39060 1754 aa22.81■■□□□ 1.24
KRT28-201ENST00000306658 RGPD5Q99666 1765 aa22.81■■□□□ 1.24
KRT28-201ENST00000306658 USHBP1Q8N6Y0 703 aa22.81■■□□□ 1.24
KRT28-201ENST00000306658 CHRNA2Q15822 529 aa22.8■■□□□ 1.24
KRT28-201ENST00000306658 MTHFSDQ2M296 383 aaKnown RBP22.8■■□□□ 1.24
KRT28-201ENST00000306658 PRDM11Q9NQV5 511 aa22.8■■□□□ 1.24
KRT28-201ENST00000306658 RGPD2P0DJD1 1756 aa22.78■■□□□ 1.24
KRT28-201ENST00000306658 PIP4K2BP78356 416 aa22.77■■□□□ 1.24
KRT28-201ENST00000306658 NCAPD2Q15021 1401 aa22.77■■□□□ 1.24
KRT28-201ENST00000306658 ABCA3Q99758 1704 aa22.77■■□□□ 1.24
KRT28-201ENST00000306658 UBAP1LF5GYI3 381 aa22.77■■□□□ 1.24
KRT28-201ENST00000306658 CSB-PGBD3P0DP91 1061 aa22.76■■□□□ 1.23
KRT28-201ENST00000306658 GNAI1P63096 354 aa22.76■■□□□ 1.23
KRT28-201ENST00000306658 RTF1Q92541 710 aaKnown RBP22.76■■□□□ 1.23
KRT28-201ENST00000306658 HTATSF1O43719 755 aaKnown RBP22.75■■□□□ 1.23
KRT28-201ENST00000306658 IFT57Q9NWB7 429 aa22.75■■□□□ 1.23
KRT28-201ENST00000306658 FANCIQ9NVI1 1328 aa22.75■■□□□ 1.23
KRT28-201ENST00000306658 CAMTA1Q9Y6Y1 1673 aa22.75■■□□□ 1.23
KRT28-201ENST00000306658 FAM83GA6ND36 823 aa22.74■■□□□ 1.23
KRT28-201ENST00000306658 RRP1P56182 461 aaKnown RBP22.74■■□□□ 1.23
KRT28-201ENST00000306658 ERICH6BQ5W0A0 696 aa22.74■■□□□ 1.23
KRT28-201ENST00000306658 NLRP2Q9NX02 1062 aa22.74■■□□□ 1.23
KRT28-201ENST00000306658 PHLPP1O60346 1717 aa22.74■■□□□ 1.23
KRT28-201ENST00000306658 TSR2Q969E8 191 aaKnown RBP22.74■■□□□ 1.23
KRT28-201ENST00000306658 THUMPD2Q9BTF0 503 aaKnown RBP22.74■■□□□ 1.23
KRT28-201ENST00000306658 FAM208AQ9UK61 1670 aaKnown RBP22.73■■□□□ 1.23
KRT28-201ENST00000306658 CT47B1P0C2W7 299 aaPredicted RBP22.73■■□□□ 1.23
KRT28-201ENST00000306658 GNAT3A8MTJ3 354 aa22.72■■□□□ 1.23
KRT28-201ENST00000306658 IRX6P78412 446 aaPredicted RBP22.72■■□□□ 1.23
KRT28-201ENST00000306658 DCTN1Q14203 1278 aa22.72■■□□□ 1.23
KRT28-201ENST00000306658 AMOTQ4VCS5 1084 aa22.72■■□□□ 1.23
KRT28-201ENST00000306658 PLEKHO1Q53GL0 409 aaPredicted RBP22.72■■□□□ 1.23
KRT28-201ENST00000306658 CFAP44Q96MT7 982 aa22.72■■□□□ 1.23
KRT28-201ENST00000306658 LAS1LQ9Y4W2 734 aaKnown RBP22.72■■□□□ 1.23
Retrieved 100 of 20,778 RNA–protein pairs in 152.8 ms