RNA–Protein interactions for RNA: ENST00000306378.10

BPTF-201, Transcript of bromodomain PHD finger transcription factor, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene BPTF, Length 9,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BPTF-201ENST00000306378 SUPT6HQ7KZ85 1726 aaKnown RBP22.66■■□□□ 1.22
BPTF-201ENST00000306378 CCDC171Q6TFL3 1326 aa22.66■■□□□ 1.22
BPTF-201ENST00000306378 CTAGE5O15320 804 aa22.66■■□□□ 1.22
BPTF-201ENST00000306378 FIBPO43427 364 aa22.66■■□□□ 1.22
BPTF-201ENST00000306378 CARMIL2Q6F5E8 1435 aa22.66■■□□□ 1.22
BPTF-201ENST00000306378 TUBBP07437 444 aa22.66■■□□□ 1.22
BPTF-201ENST00000306378 UPF3BQ9BZI7 483 aaKnown RBP22.66■■□□□ 1.22
BPTF-201ENST00000306378 DHX29Q7Z478 1369 aaKnown RBP22.66■■□□□ 1.22
BPTF-201ENST00000306378 VPS36Q86VN1 386 aa22.65■■□□□ 1.22
BPTF-201ENST00000306378 A6NNZ2 444 aa22.65■■□□□ 1.22
BPTF-201ENST00000306378 CBX1P83916 185 aa22.65■■□□□ 1.22
BPTF-201ENST00000306378 TUBB8Q3ZCM7 444 aa22.65■■□□□ 1.22
BPTF-201ENST00000306378 TTC31Q49AM3 519 aaPredicted RBP22.65■■□□□ 1.22
BPTF-201ENST00000306378 PLEKHG5O94827 1062 aa22.65■■□□□ 1.22
BPTF-201ENST00000306378 SRRTQ9BXP5 876 aaKnown RBP22.65■■□□□ 1.22
BPTF-201ENST00000306378 KIF3CO14782 793 aa22.65■■□□□ 1.22
BPTF-201ENST00000306378 ANKRD62A6NC57 917 aa22.65■■□□□ 1.22
BPTF-201ENST00000306378 CETN2P41208 172 aa22.65■■□□□ 1.22
BPTF-201ENST00000306378 SMAP1Q8IYB5 467 aaPredicted RBP22.64■■□□□ 1.22
BPTF-201ENST00000306378 SARNPP82979 210 aaKnown RBP22.64■■□□□ 1.22
BPTF-201ENST00000306378 FBXW7Q969H0 707 aa22.64■■□□□ 1.22
BPTF-201ENST00000306378 SKIDA1Q1XH10 827 aa22.64■■□□□ 1.21
BPTF-201ENST00000306378 CLCN1P35523 988 aa22.64■■□□□ 1.21
BPTF-201ENST00000306378 MAPK8IP2Q13387 824 aaPredicted RBP22.64■■□□□ 1.21
BPTF-201ENST00000306378 SRCIN1Q9C0H9 1055 aa22.63■■□□□ 1.21
BPTF-201ENST00000306378 STMN4Q9H169 189 aaPredicted RBP22.63■■□□□ 1.21
BPTF-201ENST00000306378 SH2D4BQ5SQS7 431 aa22.63■■□□□ 1.21
BPTF-201ENST00000306378 CCDC50Q8IVM0 306 aa22.63■■□□□ 1.21
BPTF-201ENST00000306378 MIPOL1Q8TD10 442 aa22.63■■□□□ 1.21
BPTF-201ENST00000306378 WASHC2AQ641Q2 1341 aa22.63■■□□□ 1.21
BPTF-201ENST00000306378 WASHC2CQ9Y4E1 1318 aa22.63■■□□□ 1.21
BPTF-201ENST00000306378 CEP112Q8N8E3 955 aa22.63■■□□□ 1.21
BPTF-201ENST00000306378 RUNDC1Q96C34 613 aa22.63■■□□□ 1.21
BPTF-201ENST00000306378 ABCC8Q09428 1581 aa22.63■■□□□ 1.21
BPTF-201ENST00000306378 MSL1Q68DK7 614 aa22.62■■□□□ 1.21
BPTF-201ENST00000306378 ZHX1Q9UKY1 873 aaPredicted RBP22.62■■□□□ 1.21
BPTF-201ENST00000306378 CARMIL1Q5VZK9 1371 aa22.62■■□□□ 1.21
BPTF-201ENST00000306378 PLIN1O60240 522 aa22.62■■□□□ 1.21
BPTF-201ENST00000306378 ME1P48163 572 aa22.61■■□□□ 1.21
BPTF-201ENST00000306378 EVC2Q86UK5 1308 aa22.61■■□□□ 1.21
BPTF-201ENST00000306378 ALS2CR12Q96Q35 445 aa22.61■■□□□ 1.21
BPTF-201ENST00000306378 FMNL2Q96PY5 1086 aa22.61■■□□□ 1.21
BPTF-201ENST00000306378 PPP6R1Q9UPN7 881 aa22.61■■□□□ 1.21
BPTF-201ENST00000306378 GNAI1P63096 354 aa22.61■■□□□ 1.21
BPTF-201ENST00000306378 IFFO1Q0D2I5 559 aa22.61■■□□□ 1.21
BPTF-201ENST00000306378 SLC3A2P08195 630 aaKnown RBP22.6■■□□□ 1.21
BPTF-201ENST00000306378 ZSCAN31Q96LW9 406 aaPredicted RBP22.6■■□□□ 1.21
BPTF-201ENST00000306378 NEK4P51957 841 aa22.6■■□□□ 1.21
BPTF-201ENST00000306378 SPA17Q15506 151 aa22.59■■□□□ 1.21
BPTF-201ENST00000306378 ARFGAP3Q9NP61 516 aa22.59■■□□□ 1.21
BPTF-201ENST00000306378 SEPT11Q9NVA2 429 aaKnown RBP22.59■■□□□ 1.21
BPTF-201ENST00000306378 STAC3Q96MF2 364 aa22.59■■□□□ 1.21
BPTF-201ENST00000306378 GTF2F1P35269 517 aaKnown RBP eCLIP22.59■■□□□ 1.216e-6■■■■□ 21.5
BPTF-201ENST00000306378 RNF187Q5TA31 235 aaPredicted RBP22.59■■□□□ 1.21
BPTF-201ENST00000306378 SCAND2PQ9GZW5 306 aaPredicted RBP22.59■■□□□ 1.21
BPTF-201ENST00000306378 CUX2O14529 1486 aa22.59■■□□□ 1.21
BPTF-201ENST00000306378 RASSF4Q9H2L5 321 aa22.59■■□□□ 1.21
BPTF-201ENST00000306378 CYP46A1Q9Y6A2 500 aa22.59■■□□□ 1.21
BPTF-201ENST00000306378 G3V3G9 751 aa22.58■■□□□ 1.21
BPTF-201ENST00000306378 DCAF8Q5TAQ9 597 aa22.58■■□□□ 1.21
BPTF-201ENST00000306378 TRIM22Q8IYM9 498 aa22.58■■□□□ 1.21
BPTF-201ENST00000306378 SPATA32Q96LK8 384 aa22.58■■□□□ 1.2
BPTF-201ENST00000306378 GBP6Q6ZN66 633 aa22.58■■□□□ 1.2
BPTF-201ENST00000306378 CEP83Q9Y592 693 aa22.58■■□□□ 1.2
BPTF-201ENST00000306378 TTC14Q96N46 770 aa22.57■■□□□ 1.2
BPTF-201ENST00000306378 KIF21BO75037 1637 aa22.57■■□□□ 1.2
BPTF-201ENST00000306378 RNF168Q8IYW5 571 aaPredicted RBP22.57■■□□□ 1.2
BPTF-201ENST00000306378 KCNH8Q96L42 1107 aa22.57■■□□□ 1.2
BPTF-201ENST00000306378 TOP2AP11388 1531 aaKnown RBP22.57■■□□□ 1.2
BPTF-201ENST00000306378 L3MBTL2Q969R5 705 aa22.57■■□□□ 1.2
BPTF-201ENST00000306378 ZFYP08048 801 aaPredicted RBP22.56■■□□□ 1.2
BPTF-201ENST00000306378 CCDC150Q8NCX0 1101 aa22.56■■□□□ 1.2
BPTF-201ENST00000306378 PRDM10Q9NQV6 1147 aa22.56■■□□□ 1.2
BPTF-201ENST00000306378 USH1CQ9Y6N9 552 aa22.56■■□□□ 1.2
BPTF-201ENST00000306378 PPP1R12BO60237 982 aaPredicted RBP22.56■■□□□ 1.2
BPTF-201ENST00000306378 LMAN1P49257 510 aa22.55■■□□□ 1.2
BPTF-201ENST00000306378 FBXO3Q9UK99 471 aa22.55■■□□□ 1.2
BPTF-201ENST00000306378 SREK1Q8WXA9 508 aaKnown RBP22.54■■□□□ 1.2
BPTF-201ENST00000306378 FAM184BQ9ULE4 1060 aa22.54■■□□□ 1.2
BPTF-201ENST00000306378 CTDP1Q9Y5B0 961 aaPredicted RBP22.54■■□□□ 1.2
BPTF-201ENST00000306378 TRIM21P19474 475 aaKnown RBP22.54■■□□□ 1.2
BPTF-201ENST00000306378 UVSSAQ2YD98 709 aa22.54■■□□□ 1.2
BPTF-201ENST00000306378 KRT32Q14532 448 aa22.54■■□□□ 1.2
BPTF-201ENST00000306378 FGFR1OPO95684 399 aaKnown RBP22.53■■□□□ 1.2
BPTF-201ENST00000306378 POTEJP0CG39 1038 aa22.53■■□□□ 1.2
BPTF-201ENST00000306378 CEP131Q9UPN4 1083 aa22.53■■□□□ 1.2
BPTF-201ENST00000306378 WASF1Q92558 559 aa22.53■■□□□ 1.2
BPTF-201ENST00000306378 ANO10Q9NW15 660 aa22.53■■□□□ 1.2
BPTF-201ENST00000306378 A0A1B0GUL7 405 aa22.52■■□□□ 1.2
BPTF-201ENST00000306378 SYCE3A1L190 88 aa22.52■■□□□ 1.2
BPTF-201ENST00000306378 GNAI3P08754 354 aa22.52■■□□□ 1.2
BPTF-201ENST00000306378 VPS37DQ86XT2 251 aa22.52■■□□□ 1.2
BPTF-201ENST00000306378 LNPKQ9C0E8 428 aa22.52■■□□□ 1.2
BPTF-201ENST00000306378 CKAP4Q07065 602 aaKnown RBP22.52■■□□□ 1.2
BPTF-201ENST00000306378 CLIP2Q9UDT6 1046 aa22.51■■□□□ 1.19
BPTF-201ENST00000306378 ATAD2Q6PL18 1390 aa22.51■■□□□ 1.19
BPTF-201ENST00000306378 MPHOSPH10O00566 681 aaKnown RBP22.51■■□□□ 1.19
BPTF-201ENST00000306378 DNAI2Q9GZS0 605 aa22.51■■□□□ 1.19
BPTF-201ENST00000306378 PANK3Q9H999 370 aa22.51■■□□□ 1.19
BPTF-201ENST00000306378 EBAG9O00559 213 aa22.51■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms