RNA–Protein interactions for RNA: ENST00000304621.10

TTC39C-201, Transcript of tetratricopeptide repeat domain 39C, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TTC39C, Length 2,304 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC39C-201ENST00000304621 CDCA7LQ96GN5 454 aa7.68□□□□□ -1.18
TTC39C-201ENST00000304621 LTBP4Q8N2S1 1624 aa7.68□□□□□ -1.18
TTC39C-201ENST00000304621 ZNF521Q96K83 1311 aa7.68□□□□□ -1.18
TTC39C-201ENST00000304621 PLEKHF1Q96S99 279 aa7.68□□□□□ -1.18
TTC39C-201ENST00000304621 PXDNQ92626 1479 aa7.67□□□□□ -1.18
TTC39C-201ENST00000304621 BRINP3Q76B58 766 aa7.67□□□□□ -1.18
TTC39C-201ENST00000304621 RRP7AQ9Y3A4 280 aaKnown RBP7.67□□□□□ -1.18
TTC39C-201ENST00000304621 RGPD1P0DJD0 1748 aa7.67□□□□□ -1.18
TTC39C-201ENST00000304621 MED1Q15648 1581 aaPredicted RBP7.67□□□□□ -1.18
TTC39C-201ENST00000304621 PLEKHG5O94827 1062 aa7.67□□□□□ -1.18
TTC39C-201ENST00000304621 EIF4A2Q14240 407 aaKnown RBP7.67□□□□□ -1.18
TTC39C-201ENST00000304621 HSP90AB2PQ58FF8 381 aa7.67□□□□□ -1.18
TTC39C-201ENST00000304621 RUNDC1Q96C34 613 aa7.67□□□□□ -1.18
TTC39C-201ENST00000304621 SLIT3O75094 1523 aa7.67□□□□□ -1.18
TTC39C-201ENST00000304621 TCP11L2Q8N4U5 519 aa7.66□□□□□ -1.18
TTC39C-201ENST00000304621 RSPH6AQ9H0K4 717 aa7.66□□□□□ -1.18
TTC39C-201ENST00000304621 LTN1O94822 1766 aa7.66□□□□□ -1.18
TTC39C-201ENST00000304621 HMOX1P09601 288 aa7.66□□□□□ -1.18
TTC39C-201ENST00000304621 NUDCQ9Y266 331 aa7.66□□□□□ -1.18
TTC39C-201ENST00000304621 SBNO1A3KN83 1393 aa7.65□□□□□ -1.18
TTC39C-201ENST00000304621 USP19O94966 1318 aa7.65□□□□□ -1.18
TTC39C-201ENST00000304621 SLAIN2Q9P270 581 aa7.65□□□□□ -1.18
TTC39C-201ENST00000304621 CRYBG1Q9Y4K1 1723 aa7.65□□□□□ -1.19
TTC39C-201ENST00000304621 NEUROD2Q15784 382 aa7.64□□□□□ -1.19
TTC39C-201ENST00000304621 LMOD2Q6P5Q4 547 aa7.64□□□□□ -1.19
TTC39C-201ENST00000304621 AEBP1Q8IUX7 1158 aa7.64□□□□□ -1.19
TTC39C-201ENST00000304621 FLT4P35916 1363 aa7.64□□□□□ -1.19
TTC39C-201ENST00000304621 ABCB7O75027 752 aa7.64□□□□□ -1.19
TTC39C-201ENST00000304621 HOXC9P31274 260 aa7.64□□□□□ -1.19
TTC39C-201ENST00000304621 PHACTR3Q96KR7 559 aa7.64□□□□□ -1.19
TTC39C-201ENST00000304621 SUPT16HQ9Y5B9 1047 aaKnown RBP7.64□□□□□ -1.19
TTC39C-201ENST00000304621 PHRF1Q9P1Y6 1649 aaKnown RBP7.64□□□□□ -1.19
TTC39C-201ENST00000304621 NPHP3Q7Z494 1330 aa7.64□□□□□ -1.19
TTC39C-201ENST00000304621 TNS3Q68CZ2 1445 aa7.63□□□□□ -1.19
TTC39C-201ENST00000304621 PRKAR2BP31323 418 aa7.63□□□□□ -1.19
TTC39C-201ENST00000304621 POLA2Q14181 598 aa7.63□□□□□ -1.19
TTC39C-201ENST00000304621 NHSL1Q5SYE7 1610 aa7.63□□□□□ -1.19
TTC39C-201ENST00000304621 GCP02774 474 aa7.63□□□□□ -1.19
TTC39C-201ENST00000304621 AMPHP49418 695 aa7.63□□□□□ -1.19
TTC39C-201ENST00000304621 WWC1Q8IX03 1113 aa7.63□□□□□ -1.19
TTC39C-201ENST00000304621 CABLES1Q8TDN4 633 aa7.63□□□□□ -1.19
TTC39C-201ENST00000304621 SPATA31A3Q5VYP0 1347 aa7.63□□□□□ -1.19
TTC39C-201ENST00000304621 FCHSD2O94868 740 aa7.62□□□□□ -1.19
TTC39C-201ENST00000304621 TMPOP42166 694 aaKnown RBP7.62□□□□□ -1.19
TTC39C-201ENST00000304621 PDE3BQ13370 1112 aa7.62□□□□□ -1.19
TTC39C-201ENST00000304621 TRIM35Q9UPQ4 493 aa7.62□□□□□ -1.19
TTC39C-201ENST00000304621 ZBTB7CA1YPR0 619 aa7.62□□□□□ -1.19
TTC39C-201ENST00000304621 SLFN5Q08AF3 891 aa7.62□□□□□ -1.19
TTC39C-201ENST00000304621 DUSP27Q5VZP5 1158 aa7.62□□□□□ -1.19
TTC39C-201ENST00000304621 ARHGEF25Q86VW2 580 aa7.62□□□□□ -1.19
TTC39C-201ENST00000304621 TRMT2AQ8IZ69 625 aaKnown RBP7.62□□□□□ -1.19
TTC39C-201ENST00000304621 SOS2Q07890 1332 aaPredicted RBP7.61□□□□□ -1.19
TTC39C-201ENST00000304621 RGPD2P0DJD1 1756 aa7.61□□□□□ -1.19
TTC39C-201ENST00000304621 RTL1A6NKG5 1358 aa7.61□□□□□ -1.19
TTC39C-201ENST00000304621 IRX6P78412 446 aaPredicted RBP7.61□□□□□ -1.19
TTC39C-201ENST00000304621 GOLGA2Q08379 1002 aa7.61□□□□□ -1.19
TTC39C-201ENST00000304621 SULT6B1Q6IMI4 303 aa7.61□□□□□ -1.19
TTC39C-201ENST00000304621 LTV1Q96GA3 475 aaPredicted RBP7.61□□□□□ -1.19
TTC39C-201ENST00000304621 EYA1Q99502 592 aa7.61□□□□□ -1.19
TTC39C-201ENST00000304621 ROBO1Q9Y6N7 1651 aa7.61□□□□□ -1.19
TTC39C-201ENST00000304621 ARHGEF10O15013 1369 aa7.61□□□□□ -1.19
TTC39C-201ENST00000304621 KIF24Q5T7B8 1368 aa7.61□□□□□ -1.19
TTC39C-201ENST00000304621 RGPD5Q99666 1765 aa7.61□□□□□ -1.19
TTC39C-201ENST00000304621 KCNH5Q8NCM2 988 aa7.61□□□□□ -1.19
TTC39C-201ENST00000304621 IP6K1Q92551 441 aa7.61□□□□□ -1.19
TTC39C-201ENST00000304621 IGSF1Q8N6C5 1336 aa7.6□□□□□ -1.19
TTC39C-201ENST00000304621 ABCA3Q99758 1704 aa7.6□□□□□ -1.19
TTC39C-201ENST00000304621 COL18A1P39060 1754 aa7.6□□□□□ -1.19
TTC39C-201ENST00000304621 ZC3H6P61129 1189 aaKnown RBP7.6□□□□□ -1.19
TTC39C-201ENST00000304621 CCDC27Q2M243 656 aa7.6□□□□□ -1.19
TTC39C-201ENST00000304621 USHBP1Q8N6Y0 703 aa7.6□□□□□ -1.19
TTC39C-201ENST00000304621 AXIN2Q9Y2T1 843 aa7.6□□□□□ -1.19
TTC39C-201ENST00000304621 MAPK8IP3Q9UPT6 1336 aa7.6□□□□□ -1.19
TTC39C-201ENST00000304621 DLG5Q8TDM6 1919 aa7.6□□□□□ -1.19
TTC39C-201ENST00000304621 RIPK4P57078 832 aa7.6□□□□□ -1.19
TTC39C-201ENST00000304621 FKBP8Q14318 412 aa7.6□□□□□ -1.19
TTC39C-201ENST00000304621 KDRP35968 1356 aa7.59□□□□□ -1.19
TTC39C-201ENST00000304621 NFE2L2Q16236 605 aa7.59□□□□□ -1.19
TTC39C-201ENST00000304621 LRRC59Q96AG4 307 aaKnown RBP7.59□□□□□ -1.19
TTC39C-201ENST00000304621 THUMPD2Q9BTF0 503 aaKnown RBP7.59□□□□□ -1.19
TTC39C-201ENST00000304621 RNF123Q5XPI4 1314 aa7.59□□□□□ -1.19
TTC39C-201ENST00000304621 NBPF6Q5VWK0 638 aa7.58□□□□□ -1.2
TTC39C-201ENST00000304621 NGEFQ8N5V2 710 aa7.58□□□□□ -1.2
TTC39C-201ENST00000304621 NBPF4Q96M43 638 aa7.58□□□□□ -1.2
TTC39C-201ENST00000304621 CAMTA1Q9Y6Y1 1673 aa7.58□□□□□ -1.2
TTC39C-201ENST00000304621 FAM83GA6ND36 823 aa7.58□□□□□ -1.2
TTC39C-201ENST00000304621 WDR63Q8IWG1 891 aa7.58□□□□□ -1.2
TTC39C-201ENST00000304621 RCAN3Q9UKA8 241 aa7.58□□□□□ -1.2
TTC39C-201ENST00000304621 AHDC1Q5TGY3 1603 aaPredicted RBP7.58□□□□□ -1.2
TTC39C-201ENST00000304621 E9PSI1 815 aa7.57□□□□□ -1.2
TTC39C-201ENST00000304621 CHRNA2Q15822 529 aa7.57□□□□□ -1.2
TTC39C-201ENST00000304621 PNNQ9H307 717 aaKnown RBP7.57□□□□□ -1.2
TTC39C-201ENST00000304621 ZBTB12Q9Y330 459 aaPredicted RBP7.57□□□□□ -1.2
TTC39C-201ENST00000304621 LMO7Q8WWI1 1683 aa7.57□□□□□ -1.2
TTC39C-201ENST00000304621 KIAA0232Q92628 1395 aa7.57□□□□□ -1.2
TTC39C-201ENST00000304621 DCTN1Q14203 1278 aa7.57□□□□□ -1.2
TTC39C-201ENST00000304621 TSR2Q969E8 191 aaKnown RBP7.57□□□□□ -1.2
TTC39C-201ENST00000304621 NCAPD2Q15021 1401 aa7.57□□□□□ -1.2
TTC39C-201ENST00000304621 MTHFSDQ2M296 383 aaKnown RBP7.56□□□□□ -1.2
TTC39C-201ENST00000304621 ANKRD24Q8TF21 1146 aa7.56□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms