RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 DHX29Q7Z478 1369 aaKnown RBP19.66■□□□□ 0.74
SNAPC4-201ENST00000298532 AEBP1Q8IUX7 1158 aa19.65■□□□□ 0.74
SNAPC4-201ENST00000298532 CABP2Q9NPB3 220 aa19.65■□□□□ 0.74
SNAPC4-201ENST00000298532 PLCH2O75038 1416 aa19.65■□□□□ 0.74
SNAPC4-201ENST00000298532 SLC26A8Q96RN1 970 aa19.64■□□□□ 0.73
SNAPC4-201ENST00000298532 SURF6O75683 361 aaKnown RBP19.64■□□□□ 0.73
SNAPC4-201ENST00000298532 TWISTNBQ3B726 338 aaPredicted RBP19.64■□□□□ 0.73
SNAPC4-201ENST00000298532 TSR2Q969E8 191 aaKnown RBP19.64■□□□□ 0.73
SNAPC4-201ENST00000298532 MPNDQ8N594 471 aa19.64■□□□□ 0.73
SNAPC4-201ENST00000298532 RTEL1-TNFRSF6BF6WH68 1400 aa19.63■□□□□ 0.73
SNAPC4-201ENST00000298532 NBPF1Q3BBV0 1214 aa19.63■□□□□ 0.73
SNAPC4-201ENST00000298532 VPS53Q5VIR6 699 aa19.63■□□□□ 0.73
SNAPC4-201ENST00000298532 UGGT2Q9NYU1 1516 aa19.63■□□□□ 0.73
SNAPC4-201ENST00000298532 ATAD2Q6PL18 1390 aa19.63■□□□□ 0.73
SNAPC4-201ENST00000298532 HIP1O00291 1037 aa19.63■□□□□ 0.73
SNAPC4-201ENST00000298532 FSD1Q9BTV5 496 aa19.63■□□□□ 0.73
SNAPC4-201ENST00000298532 KIF21AQ7Z4S6 1674 aa19.62■□□□□ 0.73
SNAPC4-201ENST00000298532 TNMDQ9H2S6 317 aa19.62■□□□□ 0.73
SNAPC4-201ENST00000298532 RAPGEF6Q8TEU7 1601 aa19.62■□□□□ 0.73
SNAPC4-201ENST00000298532 ZNF396Q96N95 335 aaPredicted RBP19.62■□□□□ 0.73
SNAPC4-201ENST00000298532 ERICH2A1L162 156 aa19.62■□□□□ 0.73
SNAPC4-201ENST00000298532 SLFN5Q08AF3 891 aa19.62■□□□□ 0.73
SNAPC4-201ENST00000298532 SF3B2Q13435 895 aaKnown RBP19.62■□□□□ 0.73
SNAPC4-201ENST00000298532 KRT85P78386 507 aa19.62■□□□□ 0.73
SNAPC4-201ENST00000298532 PDCL2Q8N4E4 241 aa19.62■□□□□ 0.73
SNAPC4-201ENST00000298532 FMNL2Q96PY5 1086 aa19.62■□□□□ 0.73
SNAPC4-201ENST00000298532 EIF4G3O43432 1585 aaKnown RBP19.62■□□□□ 0.73
SNAPC4-201ENST00000298532 PODXL2Q9NZ53 605 aa19.61■□□□□ 0.73
SNAPC4-201ENST00000298532 DCAF8L1A6NGE4 600 aa19.61■□□□□ 0.73
SNAPC4-201ENST00000298532 CAGE1Q8TC20 777 aa19.61■□□□□ 0.73
SNAPC4-201ENST00000298532 PDCL3Q9H2J4 239 aa19.61■□□□□ 0.73
SNAPC4-201ENST00000298532 PRKAR2BP31323 418 aa19.61■□□□□ 0.73
SNAPC4-201ENST00000298532 TAF3Q5VWG9 929 aa19.61■□□□□ 0.73
SNAPC4-201ENST00000298532 SYTL4Q96C24 671 aaPredicted RBP19.61■□□□□ 0.73
SNAPC4-201ENST00000298532 NAP1L1P55209 391 aaKnown RBP19.6■□□□□ 0.73
SNAPC4-201ENST00000298532 GNAI2P04899 355 aa19.6■□□□□ 0.73
SNAPC4-201ENST00000298532 RDXP35241 583 aaKnown RBP19.59■□□□□ 0.73
SNAPC4-201ENST00000298532 CYP46A1Q9Y6A2 500 aa19.59■□□□□ 0.73
SNAPC4-201ENST00000298532 ATP10BO94823 1461 aa19.59■□□□□ 0.73
SNAPC4-201ENST00000298532 CDK19Q9BWU1 502 aa19.59■□□□□ 0.73
SNAPC4-201ENST00000298532 NUP160Q12769 1436 aa19.59■□□□□ 0.73
SNAPC4-201ENST00000298532 DCTN1Q14203 1278 aa19.58■□□□□ 0.73
SNAPC4-201ENST00000298532 CCDC30Q5VVM6 783 aa19.58■□□□□ 0.73
SNAPC4-201ENST00000298532 PLEKHO1Q53GL0 409 aaPredicted RBP19.58■□□□□ 0.73
SNAPC4-201ENST00000298532 ZNF518AQ6AHZ1 1483 aa19.58■□□□□ 0.72
SNAPC4-201ENST00000298532 SMARCE1Q969G3 411 aa19.58■□□□□ 0.72
SNAPC4-201ENST00000298532 ABCC5O15440 1437 aa19.58■□□□□ 0.72
SNAPC4-201ENST00000298532 FILIP1LQ4L180 1135 aa19.57■□□□□ 0.72
SNAPC4-201ENST00000298532 STK38Q15208 465 aa19.57■□□□□ 0.72
SNAPC4-201ENST00000298532 ANKRD1Q15327 319 aa19.57■□□□□ 0.72
SNAPC4-201ENST00000298532 SYCE3A1L190 88 aa19.56■□□□□ 0.72
SNAPC4-201ENST00000298532 GAS2L2Q8NHY3 880 aa19.56■□□□□ 0.72
SNAPC4-201ENST00000298532 PTPN23Q9H3S7 1636 aa19.56■□□□□ 0.72
SNAPC4-201ENST00000298532 NEUROD6Q96NK8 337 aa19.56■□□□□ 0.72
SNAPC4-201ENST00000298532 TNRQ92752 1358 aa19.56■□□□□ 0.72
SNAPC4-201ENST00000298532 TTLL5Q6EMB2 1281 aa19.56■□□□□ 0.72
SNAPC4-201ENST00000298532 WASHC4Q2M389 1173 aa19.55■□□□□ 0.72
SNAPC4-201ENST00000298532 AMOTL1Q8IY63 956 aa19.55■□□□□ 0.72
SNAPC4-201ENST00000298532 LRRCC1Q9C099 1032 aa19.55■□□□□ 0.72
SNAPC4-201ENST00000298532 TATP17735 454 aaPredicted RBP19.55■□□□□ 0.72
SNAPC4-201ENST00000298532 DHX16O60231 1041 aaKnown RBP19.55■□□□□ 0.72
SNAPC4-201ENST00000298532 UBE2Q2Q8WVN8 375 aa19.55■□□□□ 0.72
SNAPC4-201ENST00000298532 ZNF428Q96B54 188 aa19.54■□□□□ 0.72
SNAPC4-201ENST00000298532 ABCC2Q92887 1545 aa19.54■□□□□ 0.72
SNAPC4-201ENST00000298532 TBC1D2Q9BYX2 928 aa19.54■□□□□ 0.72
SNAPC4-201ENST00000298532 RRP12Q5JTH9 1297 aaKnown RBP19.54■□□□□ 0.72
SNAPC4-201ENST00000298532 AXDND1Q5T1B0 1012 aaPredicted RBP19.54■□□□□ 0.72
SNAPC4-201ENST00000298532 LARP1BQ659C4 914 aaKnown RBP19.54■□□□□ 0.72
SNAPC4-201ENST00000298532 CCDC191Q8NCU4 936 aa19.54■□□□□ 0.72
SNAPC4-201ENST00000298532 NUP62CLQ9H1M0 184 aa19.54■□□□□ 0.72
SNAPC4-201ENST00000298532 LRPPRCP42704 1394 aaKnown RBP19.54■□□□□ 0.72
SNAPC4-201ENST00000298532 ERLIN1O75477 346 aa19.54■□□□□ 0.72
SNAPC4-201ENST00000298532 ERC1Q8IUD2 1116 aa19.54■□□□□ 0.72
SNAPC4-201ENST00000298532 SERPINC1P01008 464 aa19.53■□□□□ 0.72
SNAPC4-201ENST00000298532 PDIA4P13667 645 aaKnown RBP19.53■□□□□ 0.72
SNAPC4-201ENST00000298532 XBP1P17861 261 aa19.53■□□□□ 0.72
SNAPC4-201ENST00000298532 CALRP27797 417 aaKnown RBP19.53■□□□□ 0.72
SNAPC4-201ENST00000298532 CCT4P50991 539 aaKnown RBP19.53■□□□□ 0.72
SNAPC4-201ENST00000298532 RIC3Q7Z5B4 369 aa19.53■□□□□ 0.72
SNAPC4-201ENST00000298532 JMYQ8N9B5 988 aa19.53■□□□□ 0.72
SNAPC4-201ENST00000298532 SRCIN1Q9C0H9 1055 aa19.53■□□□□ 0.72
SNAPC4-201ENST00000298532 BRMS1Q9HCU9 246 aa19.53■□□□□ 0.72
SNAPC4-201ENST00000298532 EIF3JO75822 258 aaKnown RBP19.53■□□□□ 0.72
SNAPC4-201ENST00000298532 CEBPZQ03701 1054 aaKnown RBP19.53■□□□□ 0.72
SNAPC4-201ENST00000298532 C20orf194Q5TEA3 1177 aa19.52■□□□□ 0.72
SNAPC4-201ENST00000298532 WWC1Q8IX03 1113 aa19.52■□□□□ 0.72
SNAPC4-201ENST00000298532 KCNH5Q8NCM2 988 aa19.52■□□□□ 0.72
SNAPC4-201ENST00000298532 PIP4K2BP78356 416 aa19.52■□□□□ 0.72
SNAPC4-201ENST00000298532 ZSCAN31Q96LW9 406 aaPredicted RBP19.52■□□□□ 0.72
SNAPC4-201ENST00000298532 PRDM11Q9NQV5 511 aa19.52■□□□□ 0.72
SNAPC4-201ENST00000298532 TSPYL1Q9H0U9 437 aa19.52■□□□□ 0.71
SNAPC4-201ENST00000298532 NUTM2GQ5VZR2 741 aa19.51■□□□□ 0.71
SNAPC4-201ENST00000298532 SKAP1Q86WV1 359 aa19.51■□□□□ 0.71
SNAPC4-201ENST00000298532 PIP4K2AP48426 406 aaPredicted RBP19.51■□□□□ 0.71
SNAPC4-201ENST00000298532 CCDC61Q9Y6R9 512 aa19.51■□□□□ 0.71
SNAPC4-201ENST00000298532 NAIPQ13075 1403 aa19.51■□□□□ 0.71
SNAPC4-201ENST00000298532 KIAA0556O60303 1618 aa19.51■□□□□ 0.71
SNAPC4-201ENST00000298532 CEP57L1Q8IYX8 460 aa19.51■□□□□ 0.71
SNAPC4-201ENST00000298532 ABCC10Q5T3U5 1492 aa19.5■□□□□ 0.71
SNAPC4-201ENST00000298532 SPATA32Q96LK8 384 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 88 ms