RNA–Protein interactions for RNA: ENST00000298532.2

SNAPC4-201, Transcript of small nuclear RNA activating complex polypeptide 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNAPC4, Length 5,010 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNAPC4-201ENST00000298532 DHX29Q7Z478 1369 aaKnown RBP19.66■□□□□ 0.74
SNAPC4-201ENST00000298532 AEBP1Q8IUX7 1158 aa19.65■□□□□ 0.74
SNAPC4-201ENST00000298532 CABP2Q9NPB3 220 aa19.65■□□□□ 0.74
SNAPC4-201ENST00000298532 PLCH2O75038 1416 aa19.65■□□□□ 0.74
SNAPC4-201ENST00000298532 SLC26A8Q96RN1 970 aa19.64■□□□□ 0.73
SNAPC4-201ENST00000298532 SURF6O75683 361 aaKnown RBP19.64■□□□□ 0.73
SNAPC4-201ENST00000298532 TWISTNBQ3B726 338 aaPredicted RBP19.64■□□□□ 0.73
SNAPC4-201ENST00000298532 TSR2Q969E8 191 aaKnown RBP19.64■□□□□ 0.73
SNAPC4-201ENST00000298532 MPNDQ8N594 471 aa19.64■□□□□ 0.73
SNAPC4-201ENST00000298532 RTEL1-TNFRSF6BF6WH68 1400 aa19.63■□□□□ 0.73
SNAPC4-201ENST00000298532 NBPF1Q3BBV0 1214 aa19.63■□□□□ 0.73
SNAPC4-201ENST00000298532 VPS53Q5VIR6 699 aa19.63■□□□□ 0.73
SNAPC4-201ENST00000298532 UGGT2Q9NYU1 1516 aa19.63■□□□□ 0.73
SNAPC4-201ENST00000298532 ATAD2Q6PL18 1390 aa19.63■□□□□ 0.73
SNAPC4-201ENST00000298532 HIP1O00291 1037 aa19.63■□□□□ 0.73
SNAPC4-201ENST00000298532 FSD1Q9BTV5 496 aa19.63■□□□□ 0.73
SNAPC4-201ENST00000298532 KIF21AQ7Z4S6 1674 aa19.62■□□□□ 0.73
SNAPC4-201ENST00000298532 TNMDQ9H2S6 317 aa19.62■□□□□ 0.73
SNAPC4-201ENST00000298532 RAPGEF6Q8TEU7 1601 aa19.62■□□□□ 0.73
SNAPC4-201ENST00000298532 ZNF396Q96N95 335 aaPredicted RBP19.62■□□□□ 0.73
SNAPC4-201ENST00000298532 ERICH2A1L162 156 aa19.62■□□□□ 0.73
SNAPC4-201ENST00000298532 SLFN5Q08AF3 891 aa19.62■□□□□ 0.73
SNAPC4-201ENST00000298532 SF3B2Q13435 895 aaKnown RBP19.62■□□□□ 0.73
SNAPC4-201ENST00000298532 KRT85P78386 507 aa19.62■□□□□ 0.73
SNAPC4-201ENST00000298532 PDCL2Q8N4E4 241 aa19.62■□□□□ 0.73
SNAPC4-201ENST00000298532 FMNL2Q96PY5 1086 aa19.62■□□□□ 0.73
SNAPC4-201ENST00000298532 EIF4G3O43432 1585 aaKnown RBP19.62■□□□□ 0.73
SNAPC4-201ENST00000298532 PODXL2Q9NZ53 605 aa19.61■□□□□ 0.73
SNAPC4-201ENST00000298532 DCAF8L1A6NGE4 600 aa19.61■□□□□ 0.73
SNAPC4-201ENST00000298532 CAGE1Q8TC20 777 aa19.61■□□□□ 0.73
SNAPC4-201ENST00000298532 PDCL3Q9H2J4 239 aa19.61■□□□□ 0.73
SNAPC4-201ENST00000298532 PRKAR2BP31323 418 aa19.61■□□□□ 0.73
SNAPC4-201ENST00000298532 TAF3Q5VWG9 929 aa19.61■□□□□ 0.73
SNAPC4-201ENST00000298532 SYTL4Q96C24 671 aaPredicted RBP19.61■□□□□ 0.73
SNAPC4-201ENST00000298532 NAP1L1P55209 391 aaKnown RBP19.6■□□□□ 0.73
SNAPC4-201ENST00000298532 GNAI2P04899 355 aa19.6■□□□□ 0.73
SNAPC4-201ENST00000298532 RDXP35241 583 aaKnown RBP19.59■□□□□ 0.73
SNAPC4-201ENST00000298532 CYP46A1Q9Y6A2 500 aa19.59■□□□□ 0.73
SNAPC4-201ENST00000298532 ATP10BO94823 1461 aa19.59■□□□□ 0.73
SNAPC4-201ENST00000298532 CDK19Q9BWU1 502 aa19.59■□□□□ 0.73
SNAPC4-201ENST00000298532 NUP160Q12769 1436 aa19.59■□□□□ 0.73
SNAPC4-201ENST00000298532 DCTN1Q14203 1278 aa19.58■□□□□ 0.73
SNAPC4-201ENST00000298532 CCDC30Q5VVM6 783 aa19.58■□□□□ 0.73
SNAPC4-201ENST00000298532 PLEKHO1Q53GL0 409 aaPredicted RBP19.58■□□□□ 0.73
SNAPC4-201ENST00000298532 ZNF518AQ6AHZ1 1483 aa19.58■□□□□ 0.72
SNAPC4-201ENST00000298532 SMARCE1Q969G3 411 aa19.58■□□□□ 0.72
SNAPC4-201ENST00000298532 ABCC5O15440 1437 aa19.58■□□□□ 0.72
SNAPC4-201ENST00000298532 FILIP1LQ4L180 1135 aa19.57■□□□□ 0.72
SNAPC4-201ENST00000298532 STK38Q15208 465 aa19.57■□□□□ 0.72
SNAPC4-201ENST00000298532 ANKRD1Q15327 319 aa19.57■□□□□ 0.72
SNAPC4-201ENST00000298532 SYCE3A1L190 88 aa19.56■□□□□ 0.72
SNAPC4-201ENST00000298532 GAS2L2Q8NHY3 880 aa19.56■□□□□ 0.72
SNAPC4-201ENST00000298532 PTPN23Q9H3S7 1636 aa19.56■□□□□ 0.72
SNAPC4-201ENST00000298532 NEUROD6Q96NK8 337 aa19.56■□□□□ 0.72
SNAPC4-201ENST00000298532 TNRQ92752 1358 aa19.56■□□□□ 0.72
SNAPC4-201ENST00000298532 TTLL5Q6EMB2 1281 aa19.56■□□□□ 0.72
SNAPC4-201ENST00000298532 WASHC4Q2M389 1173 aa19.55■□□□□ 0.72
SNAPC4-201ENST00000298532 AMOTL1Q8IY63 956 aa19.55■□□□□ 0.72
SNAPC4-201ENST00000298532 LRRCC1Q9C099 1032 aa19.55■□□□□ 0.72
SNAPC4-201ENST00000298532 TATP17735 454 aaPredicted RBP19.55■□□□□ 0.72
SNAPC4-201ENST00000298532 DHX16O60231 1041 aaKnown RBP19.55■□□□□ 0.72
SNAPC4-201ENST00000298532 UBE2Q2Q8WVN8 375 aa19.55■□□□□ 0.72
SNAPC4-201ENST00000298532 ZNF428Q96B54 188 aa19.54■□□□□ 0.72
SNAPC4-201ENST00000298532 ABCC2Q92887 1545 aa19.54■□□□□ 0.72
SNAPC4-201ENST00000298532 TBC1D2Q9BYX2 928 aa19.54■□□□□ 0.72
SNAPC4-201ENST00000298532 RRP12Q5JTH9 1297 aaKnown RBP19.54■□□□□ 0.72
SNAPC4-201ENST00000298532 AXDND1Q5T1B0 1012 aaPredicted RBP19.54■□□□□ 0.72
SNAPC4-201ENST00000298532 LARP1BQ659C4 914 aaKnown RBP19.54■□□□□ 0.72
SNAPC4-201ENST00000298532 CCDC191Q8NCU4 936 aa19.54■□□□□ 0.72
SNAPC4-201ENST00000298532 NUP62CLQ9H1M0 184 aa19.54■□□□□ 0.72
SNAPC4-201ENST00000298532 LRPPRCP42704 1394 aaKnown RBP19.54■□□□□ 0.72
SNAPC4-201ENST00000298532 ERLIN1O75477 346 aa19.54■□□□□ 0.72
SNAPC4-201ENST00000298532 ERC1Q8IUD2 1116 aa19.54■□□□□ 0.72
SNAPC4-201ENST00000298532 SERPINC1P01008 464 aa19.53■□□□□ 0.72
SNAPC4-201ENST00000298532 PDIA4P13667 645 aaKnown RBP19.53■□□□□ 0.72
SNAPC4-201ENST00000298532 XBP1P17861 261 aa19.53■□□□□ 0.72
SNAPC4-201ENST00000298532 CALRP27797 417 aaKnown RBP19.53■□□□□ 0.72
SNAPC4-201ENST00000298532 CCT4P50991 539 aaKnown RBP19.53■□□□□ 0.72
SNAPC4-201ENST00000298532 RIC3Q7Z5B4 369 aa19.53■□□□□ 0.72
SNAPC4-201ENST00000298532 JMYQ8N9B5 988 aa19.53■□□□□ 0.72
SNAPC4-201ENST00000298532 SRCIN1Q9C0H9 1055 aa19.53■□□□□ 0.72
SNAPC4-201ENST00000298532 BRMS1Q9HCU9 246 aa19.53■□□□□ 0.72
SNAPC4-201ENST00000298532 EIF3JO75822 258 aaKnown RBP19.53■□□□□ 0.72
SNAPC4-201ENST00000298532 CEBPZQ03701 1054 aaKnown RBP19.53■□□□□ 0.72
SNAPC4-201ENST00000298532 C20orf194Q5TEA3 1177 aa19.52■□□□□ 0.72
SNAPC4-201ENST00000298532 WWC1Q8IX03 1113 aa19.52■□□□□ 0.72
SNAPC4-201ENST00000298532 KCNH5Q8NCM2 988 aa19.52■□□□□ 0.72
SNAPC4-201ENST00000298532 PIP4K2BP78356 416 aa19.52■□□□□ 0.72
SNAPC4-201ENST00000298532 ZSCAN31Q96LW9 406 aaPredicted RBP19.52■□□□□ 0.72
SNAPC4-201ENST00000298532 PRDM11Q9NQV5 511 aa19.52■□□□□ 0.72
SNAPC4-201ENST00000298532 TSPYL1Q9H0U9 437 aa19.52■□□□□ 0.71
SNAPC4-201ENST00000298532 NUTM2GQ5VZR2 741 aa19.51■□□□□ 0.71
SNAPC4-201ENST00000298532 SKAP1Q86WV1 359 aa19.51■□□□□ 0.71
SNAPC4-201ENST00000298532 PIP4K2AP48426 406 aaPredicted RBP19.51■□□□□ 0.71
SNAPC4-201ENST00000298532 CCDC61Q9Y6R9 512 aa19.51■□□□□ 0.71
SNAPC4-201ENST00000298532 NAIPQ13075 1403 aa19.51■□□□□ 0.71
SNAPC4-201ENST00000298532 KIAA0556O60303 1618 aa19.51■□□□□ 0.71
SNAPC4-201ENST00000298532 CEP57L1Q8IYX8 460 aa19.51■□□□□ 0.71
SNAPC4-201ENST00000298532 ABCC10Q5T3U5 1492 aa19.5■□□□□ 0.71
SNAPC4-201ENST00000298532 SPATA32Q96LK8 384 aa19.5■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms