RNA–Protein interactions for RNA: ENST00000294543.10

TMCO4-201, Transcript of transmembrane and coiled-coil domains 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TMCO4, Length 2,974 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCO4-201ENST00000294543 MVPQ14764 893 aaKnown RBP13.53□□□□□ -0.24
TMCO4-201ENST00000294543 ZNF710Q8N1W2 664 aa13.53□□□□□ -0.24
TMCO4-201ENST00000294543 ERVK-7P63135 1459 aa13.53□□□□□ -0.24
TMCO4-201ENST00000294543 PIK3C2GO75747 1445 aa13.53□□□□□ -0.24
TMCO4-201ENST00000294543 PRPF40AO75400 957 aaKnown RBP13.53□□□□□ -0.24
TMCO4-201ENST00000294543 LNPKQ9C0E8 428 aa13.53□□□□□ -0.24
TMCO4-201ENST00000294543 MYOM1P52179 1685 aa13.53□□□□□ -0.24
TMCO4-201ENST00000294543 SYCE3A1L190 88 aa13.53□□□□□ -0.24
TMCO4-201ENST00000294543 ZBTB22O15209 634 aa13.53□□□□□ -0.24
TMCO4-201ENST00000294543 MAPK8IP2Q13387 824 aaPredicted RBP13.53□□□□□ -0.24
TMCO4-201ENST00000294543 IFT172Q9UG01 1749 aa13.51□□□□□ -0.25
TMCO4-201ENST00000294543 NEURL4Q96JN8 1562 aa13.51□□□□□ -0.25
TMCO4-201ENST00000294543 ZNF771Q7L3S4 317 aaPredicted RBP13.51□□□□□ -0.25
TMCO4-201ENST00000294543 ITPRIPQ8IWB1 547 aa13.51□□□□□ -0.25
TMCO4-201ENST00000294543 TCP11L2Q8N4U5 519 aa13.51□□□□□ -0.25
TMCO4-201ENST00000294543 KDM5AP29375 1690 aaKnown RBP13.51□□□□□ -0.25
TMCO4-201ENST00000294543 MTHFSP49914 203 aa13.5□□□□□ -0.25
TMCO4-201ENST00000294543 DZIP1LQ8IYY4 767 aaKnown RBP13.5□□□□□ -0.25
TMCO4-201ENST00000294543 LMBRD1Q9NUN5 540 aa13.5□□□□□ -0.25
TMCO4-201ENST00000294543 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP13.5□□□□□ -0.25
TMCO4-201ENST00000294543 NRXN1Q9ULB1 1477 aa13.5□□□□□ -0.25
TMCO4-201ENST00000294543 NSD3Q9BZ95 1437 aa13.5□□□□□ -0.25
TMCO4-201ENST00000294543 C14orf93Q9H972 538 aaKnown RBP13.5□□□□□ -0.25
TMCO4-201ENST00000294543 IPO4Q8TEX9 1081 aaKnown RBP13.5□□□□□ -0.25
TMCO4-201ENST00000294543 ZNF830Q96NB3 372 aaPredicted RBP13.5□□□□□ -0.25
TMCO4-201ENST00000294543 KIF2CQ99661 725 aa13.5□□□□□ -0.25
TMCO4-201ENST00000294543 KIF3AQ9Y496 699 aa13.5□□□□□ -0.25
TMCO4-201ENST00000294543 HMGN5P82970 282 aaKnown RBP13.49□□□□□ -0.25
TMCO4-201ENST00000294543 ZKSCAN2Q63HK3 967 aa13.49□□□□□ -0.25
TMCO4-201ENST00000294543 PKP1Q13835 747 aa13.49□□□□□ -0.25
TMCO4-201ENST00000294543 PDCL2Q8N4E4 241 aa13.49□□□□□ -0.25
TMCO4-201ENST00000294543 FOXD4L5Q5VV16 416 aaPredicted RBP13.48□□□□□ -0.25
TMCO4-201ENST00000294543 C17orf53Q8N3J3 647 aaPredicted RBP13.48□□□□□ -0.25
TMCO4-201ENST00000294543 FOXD4L4Q8WXT5 416 aaPredicted RBP13.48□□□□□ -0.25
TMCO4-201ENST00000294543 PRIMPOLQ96LW4 560 aa13.48□□□□□ -0.25
TMCO4-201ENST00000294543 STK26Q9P289 416 aa13.48□□□□□ -0.25
TMCO4-201ENST00000294543 KIF16BQ96L93 1317 aa13.48□□□□□ -0.25
TMCO4-201ENST00000294543 KIAA1210Q9ULL0 1709 aa13.48□□□□□ -0.25
TMCO4-201ENST00000294543 LRSAM1Q6UWE0 723 aa13.47□□□□□ -0.25
TMCO4-201ENST00000294543 PPLO60437 1756 aa13.47□□□□□ -0.25
TMCO4-201ENST00000294543 U2AF2P26368 475 aaKnown RBP eCLIP13.47□□□□□ -0.25
TMCO4-201ENST00000294543 NUCB2P80303 420 aa13.47□□□□□ -0.25
TMCO4-201ENST00000294543 NGEFQ8N5V2 710 aa13.47□□□□□ -0.25
TMCO4-201ENST00000294543 GPT2Q8TD30 523 aa13.47□□□□□ -0.25
TMCO4-201ENST00000294543 CHAMP1Q96JM3 812 aa13.47□□□□□ -0.25
TMCO4-201ENST00000294543 CABP2Q9NPB3 220 aa13.47□□□□□ -0.25
TMCO4-201ENST00000294543 ARHGAP31Q2M1Z3 1444 aa13.47□□□□□ -0.25
TMCO4-201ENST00000294543 U2AF1L5P0DN76 240 aaPredicted RBP13.47□□□□□ -0.25
TMCO4-201ENST00000294543 U2AF1Q01081 240 aaKnown RBP eCLIP13.47□□□□□ -0.25
TMCO4-201ENST00000294543 CLEC17AQ6ZS10 378 aa13.47□□□□□ -0.25
TMCO4-201ENST00000294543 BCL2L12Q9HB09 334 aa13.46□□□□□ -0.25
TMCO4-201ENST00000294543 TMEM63CQ9P1W3 806 aa13.46□□□□□ -0.25
TMCO4-201ENST00000294543 VGFO15240 615 aaPredicted RBP13.46□□□□□ -0.26
TMCO4-201ENST00000294543 RPGRIP1LQ68CZ1 1315 aa13.46□□□□□ -0.26
TMCO4-201ENST00000294543 NOLC1Q14978 699 aaKnown RBP eCLIP13.45□□□□□ -0.26
TMCO4-201ENST00000294543 SMC4Q9NTJ3 1288 aa13.45□□□□□ -0.26
TMCO4-201ENST00000294543 SLC52A1Q9NWF4 448 aa13.45□□□□□ -0.26
TMCO4-201ENST00000294543 NPC1L1Q9UHC9 1359 aa13.45□□□□□ -0.26
TMCO4-201ENST00000294543 PIK3C2BO00750 1634 aa13.45□□□□□ -0.26
TMCO4-201ENST00000294543 HDAC1Q13547 482 aaPredicted RBP13.45□□□□□ -0.26
TMCO4-201ENST00000294543 TAF3Q5VWG9 929 aa13.45□□□□□ -0.26
TMCO4-201ENST00000294543 TSR2Q969E8 191 aaKnown RBP13.45□□□□□ -0.26
TMCO4-201ENST00000294543 RUNDC1Q96C34 613 aa13.45□□□□□ -0.26
TMCO4-201ENST00000294543 U2SURPO15042 1029 aaKnown RBP13.44□□□□□ -0.26
TMCO4-201ENST00000294543 ADGRB1O14514 1584 aa13.44□□□□□ -0.26
TMCO4-201ENST00000294543 NEXMIFQ5QGS0 1516 aa13.44□□□□□ -0.26
TMCO4-201ENST00000294543 TTC12Q9H892 705 aaPredicted RBP13.44□□□□□ -0.26
TMCO4-201ENST00000294543 STAG3Q9UJ98 1225 aa13.44□□□□□ -0.26
TMCO4-201ENST00000294543 DDX19BQ9UMR2 479 aa13.44□□□□□ -0.26
TMCO4-201ENST00000294543 NSFL1CQ9UNZ2 370 aaKnown RBP13.44□□□□□ -0.26
TMCO4-201ENST00000294543 KIF13AQ9H1H9 1805 aa13.43□□□□□ -0.26
TMCO4-201ENST00000294543 TAF7LQ5H9L4 462 aa13.43□□□□□ -0.26
TMCO4-201ENST00000294543 TBC1D9Q6ZT07 1266 aa13.43□□□□□ -0.26
TMCO4-201ENST00000294543 ZC3H13Q5T200 1668 aaKnown RBP13.42□□□□□ -0.26
TMCO4-201ENST00000294543 ANKRD45Q5TZF3 282 aa13.42□□□□□ -0.26
TMCO4-201ENST00000294543 PREX1Q8TCU6 1659 aa13.42□□□□□ -0.26
TMCO4-201ENST00000294543 MYO5BQ9ULV0 1848 aa13.42□□□□□ -0.26
TMCO4-201ENST00000294543 AEBP2Q6ZN18 517 aaPredicted RBP13.42□□□□□ -0.26
TMCO4-201ENST00000294543 CHD1LQ86WJ1 897 aa13.42□□□□□ -0.26
TMCO4-201ENST00000294543 PIBF1Q8WXW3 757 aa13.42□□□□□ -0.26
TMCO4-201ENST00000294543 GGNBP2Q9H3C7 697 aa13.42□□□□□ -0.26
TMCO4-201ENST00000294543 POLR3AO14802 1390 aaPredicted RBP13.42□□□□□ -0.26
TMCO4-201ENST00000294543 TRIM27P14373 513 aa13.41□□□□□ -0.26
TMCO4-201ENST00000294543 PAXIP1Q6ZW49 1069 aaPredicted RBP13.41□□□□□ -0.26
TMCO4-201ENST00000294543 GTF2F1P35269 517 aaKnown RBP eCLIP13.41□□□□□ -0.26
TMCO4-201ENST00000294543 KCNJ4P48050 445 aa13.41□□□□□ -0.26
TMCO4-201ENST00000294543 PLCB2Q00722 1185 aa13.41□□□□□ -0.26
TMCO4-201ENST00000294543 NUCB1Q02818 461 aa13.41□□□□□ -0.26
TMCO4-201ENST00000294543 TPRNQ4KMQ1 711 aa13.41□□□□□ -0.26
TMCO4-201ENST00000294543 BMP2KLQ5H9B9 411 aa13.41□□□□□ -0.26
TMCO4-201ENST00000294543 TSPY26PQ9H489 355 aa13.41□□□□□ -0.26
TMCO4-201ENST00000294543 SETBP1Q9Y6X0 1596 aa13.4□□□□□ -0.26
TMCO4-201ENST00000294543 CHAF1AQ13111 956 aaPredicted RBP13.4□□□□□ -0.26
TMCO4-201ENST00000294543 ZGPATQ8N5A5 531 aaKnown RBP13.4□□□□□ -0.26
TMCO4-201ENST00000294543 CFAP53Q96M91 514 aa13.4□□□□□ -0.26
TMCO4-201ENST00000294543 SRPK2P78362 688 aaKnown RBP13.4□□□□□ -0.26
TMCO4-201ENST00000294543 FBLN1P23142 703 aa13.39□□□□□ -0.27
TMCO4-201ENST00000294543 TMEM57Q8N5G2 664 aa13.39□□□□□ -0.27
TMCO4-201ENST00000294543 USP25Q9UHP3 1055 aa13.39□□□□□ -0.27
TMCO4-201ENST00000294543 CLTCQ00610 1675 aaKnown RBP13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms