RNA–Protein interactions for RNA: ENST00000290317.9

SLC13A3-202, Transcript of solute carrier family 13 member 3, humanhuman

TSL 5 BASIC

Gene SLC13A3, Length 3,994 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-202ENST00000290317 SMG6Q86US8 1419 aaKnown RBP9.82□□□□□ -0.84
SLC13A3-202ENST00000290317 CPSF1Q10570 1443 aaKnown RBP9.82□□□□□ -0.84
SLC13A3-202ENST00000290317 CDCA7LQ96GN5 454 aa9.82□□□□□ -0.84
SLC13A3-202ENST00000290317 SLAIN2Q9P270 581 aa9.82□□□□□ -0.84
SLC13A3-202ENST00000290317 TMPOP42166 694 aaKnown RBP9.81□□□□□ -0.84
SLC13A3-202ENST00000290317 AATKQ6ZMQ8 1374 aa9.81□□□□□ -0.84
SLC13A3-202ENST00000290317 ZNF335Q9H4Z2 1342 aaPredicted RBP9.81□□□□□ -0.84
SLC13A3-202ENST00000290317 MS4A1P11836 297 aa9.81□□□□□ -0.84
SLC13A3-202ENST00000290317 EVA1CP58658 441 aa9.81□□□□□ -0.84
SLC13A3-202ENST00000290317 ZC3H6P61129 1189 aaKnown RBP9.81□□□□□ -0.84
SLC13A3-202ENST00000290317 HSP90AB2PQ58FF8 381 aa9.81□□□□□ -0.84
SLC13A3-202ENST00000290317 WWC1Q8IX03 1113 aa9.8□□□□□ -0.84
SLC13A3-202ENST00000290317 GAS2L2Q8NHY3 880 aa9.8□□□□□ -0.84
SLC13A3-202ENST00000290317 GCP02774 474 aa9.79□□□□□ -0.84
SLC13A3-202ENST00000290317 FRAT1Q92837 279 aaPredicted RBP9.79□□□□□ -0.84
SLC13A3-202ENST00000290317 NLRP2Q9NX02 1062 aa9.79□□□□□ -0.84
SLC13A3-202ENST00000290317 FLT4P35916 1363 aa9.79□□□□□ -0.84
SLC13A3-202ENST00000290317 MAP3K19Q56UN5 1328 aa9.79□□□□□ -0.84
SLC13A3-202ENST00000290317 NFE2L2Q16236 605 aa9.79□□□□□ -0.84
SLC13A3-202ENST00000290317 GNAI1P63096 354 aa9.79□□□□□ -0.84
SLC13A3-202ENST00000290317 RAPGEF4Q8WZA2 1011 aa9.79□□□□□ -0.84
SLC13A3-202ENST00000290317 TOM1O60784 492 aa9.78□□□□□ -0.84
SLC13A3-202ENST00000290317 C1orf141Q5JVX7 400 aa9.78□□□□□ -0.84
SLC13A3-202ENST00000290317 PRDM11Q9NQV5 511 aa9.78□□□□□ -0.84
SLC13A3-202ENST00000290317 NRXN3Q9Y4C0 1643 aa9.78□□□□□ -0.84
SLC13A3-202ENST00000290317 EIF4A2Q14240 407 aaKnown RBP9.78□□□□□ -0.84
SLC13A3-202ENST00000290317 NCOA3Q9Y6Q9 1424 aa9.78□□□□□ -0.84
SLC13A3-202ENST00000290317 SLFN5Q08AF3 891 aa9.78□□□□□ -0.84
SLC13A3-202ENST00000290317 FTSJ3Q8IY81 847 aaKnown RBP9.78□□□□□ -0.84
SLC13A3-202ENST00000290317 CHMP4AQ9BY43 222 aa9.78□□□□□ -0.84
SLC13A3-202ENST00000290317 NKTRP30414 1462 aaKnown RBP9.78□□□□□ -0.84
SLC13A3-202ENST00000290317 IL13P35225 146 aa9.77□□□□□ -0.84
SLC13A3-202ENST00000290317 PLEKHO1Q53GL0 409 aaPredicted RBP9.77□□□□□ -0.84
SLC13A3-202ENST00000290317 LMTK3Q96Q04 1460 aa9.77□□□□□ -0.85
SLC13A3-202ENST00000290317 SBNO1A3KN83 1393 aa9.77□□□□□ -0.85
SLC13A3-202ENST00000290317 IPO8O15397 1037 aaKnown RBP9.77□□□□□ -0.85
SLC13A3-202ENST00000290317 IP6K1Q92551 441 aa9.77□□□□□ -0.85
SLC13A3-202ENST00000290317 CDC42BPGQ6DT37 1551 aa9.77□□□□□ -0.85
SLC13A3-202ENST00000290317 CCDC27Q2M243 656 aa9.76□□□□□ -0.85
SLC13A3-202ENST00000290317 HOXC9P31274 260 aa9.76□□□□□ -0.85
SLC13A3-202ENST00000290317 PIP4K2BP78356 416 aa9.76□□□□□ -0.85
SLC13A3-202ENST00000290317 BLMP54132 1417 aaPredicted RBP9.75□□□□□ -0.85
SLC13A3-202ENST00000290317 RRP1P56182 461 aaKnown RBP9.75□□□□□ -0.85
SLC13A3-202ENST00000290317 NCBP3Q53F19 620 aaKnown RBP9.75□□□□□ -0.85
SLC13A3-202ENST00000290317 KNDC1Q76NI1 1749 aa9.75□□□□□ -0.85
SLC13A3-202ENST00000290317 TEFQ10587 303 aa9.75□□□□□ -0.85
SLC13A3-202ENST00000290317 TAF7LQ5H9L4 462 aa9.75□□□□□ -0.85
SLC13A3-202ENST00000290317 SMC4Q9NTJ3 1288 aa9.75□□□□□ -0.85
SLC13A3-202ENST00000290317 ZNF142P52746 1687 aaPredicted RBP9.75□□□□□ -0.85
SLC13A3-202ENST00000290317 ARHGEF10O15013 1369 aa9.75□□□□□ -0.85
SLC13A3-202ENST00000290317 LRRC59Q96AG4 307 aaKnown RBP9.74□□□□□ -0.85
SLC13A3-202ENST00000290317 USP31Q70CQ4 1352 aa9.74□□□□□ -0.85
SLC13A3-202ENST00000290317 CD163L1Q9NR16 1453 aa9.74□□□□□ -0.85
SLC13A3-202ENST00000290317 TATP17735 454 aaPredicted RBP9.74□□□□□ -0.85
SLC13A3-202ENST00000290317 CHMP4BQ9H444 224 aaKnown RBP9.74□□□□□ -0.85
SLC13A3-202ENST00000290317 C1orf167Q5SNV9 1468 aa9.74□□□□□ -0.85
SLC13A3-202ENST00000290317 CT47B1P0C2W7 299 aaPredicted RBP9.74□□□□□ -0.85
SLC13A3-202ENST00000290317 DDX17Q92841 729 aaKnown RBP9.74□□□□□ -0.85
SLC13A3-202ENST00000290317 ANKRD24Q8TF21 1146 aa9.73□□□□□ -0.85
SLC13A3-202ENST00000290317 KIF24Q5T7B8 1368 aa9.73□□□□□ -0.85
SLC13A3-202ENST00000290317 AMOTQ4VCS5 1084 aa9.73□□□□□ -0.85
SLC13A3-202ENST00000290317 DUSP27Q5VZP5 1158 aa9.73□□□□□ -0.85
SLC13A3-202ENST00000290317 TOM1L2Q6ZVM7 507 aa9.73□□□□□ -0.85
SLC13A3-202ENST00000290317 EYA1Q99502 592 aa9.73□□□□□ -0.85
SLC13A3-202ENST00000290317 MYOM1P52179 1685 aa9.73□□□□□ -0.85
SLC13A3-202ENST00000290317 BRINP3Q76B58 766 aa9.73□□□□□ -0.85
SLC13A3-202ENST00000290317 CABLES1Q8TDN4 633 aa9.73□□□□□ -0.85
SLC13A3-202ENST00000290317 IL16Q14005 1332 aa9.72□□□□□ -0.85
SLC13A3-202ENST00000290317 CCDC9Q9Y3X0 531 aaKnown RBP9.72□□□□□ -0.85
SLC13A3-202ENST00000290317 DCCP43146 1447 aa9.72□□□□□ -0.85
SLC13A3-202ENST00000290317 UBAP1LF5GYI3 381 aa9.72□□□□□ -0.85
SLC13A3-202ENST00000290317 ELL2O00472 640 aaPredicted RBP9.72□□□□□ -0.85
SLC13A3-202ENST00000290317 ARXQ96QS3 562 aa9.72□□□□□ -0.85
SLC13A3-202ENST00000290317 STRN4Q9NRL3 753 aa9.72□□□□□ -0.85
SLC13A3-202ENST00000290317 TSPYL4Q9UJ04 414 aa9.72□□□□□ -0.85
SLC13A3-202ENST00000290317 GNAT3A8MTJ3 354 aa9.72□□□□□ -0.85
SLC13A3-202ENST00000290317 EXOSC9Q06265 439 aaKnown RBP9.72□□□□□ -0.85
SLC13A3-202ENST00000290317 ZNF530Q6P9A1 599 aaPredicted RBP9.72□□□□□ -0.85
SLC13A3-202ENST00000290317 AEBP1Q8IUX7 1158 aa9.72□□□□□ -0.85
SLC13A3-202ENST00000290317 STK31Q9BXU1 1019 aa9.72□□□□□ -0.85
SLC13A3-202ENST00000290317 SPG7Q9UQ90 795 aa9.72□□□□□ -0.85
SLC13A3-202ENST00000290317 PNPLA6Q8IY17 1366 aa9.71□□□□□ -0.85
SLC13A3-202ENST00000290317 ADGRB2O60241 1585 aa9.71□□□□□ -0.85
SLC13A3-202ENST00000290317 USHBP1Q8N6Y0 703 aa9.71□□□□□ -0.85
SLC13A3-202ENST00000290317 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.71□□□□□ -0.85
SLC13A3-202ENST00000290317 CDK12Q9NYV4 1490 aaPredicted RBP9.71□□□□□ -0.86
SLC13A3-202ENST00000290317 CHRNA2Q15822 529 aa9.71□□□□□ -0.86
SLC13A3-202ENST00000290317 TSR2Q969E8 191 aaKnown RBP9.71□□□□□ -0.86
SLC13A3-202ENST00000290317 PHACTR3Q96KR7 559 aa9.71□□□□□ -0.86
SLC13A3-202ENST00000290317 PLIN1O60240 522 aa9.71□□□□□ -0.86
SLC13A3-202ENST00000290317 IFT57Q9NWB7 429 aa9.71□□□□□ -0.86
SLC13A3-202ENST00000290317 ARHGEF25Q86VW2 580 aa9.7□□□□□ -0.86
SLC13A3-202ENST00000290317 USP32Q8NFA0 1604 aa9.7□□□□□ -0.86
SLC13A3-202ENST00000290317 ZKSCAN2Q63HK3 967 aa9.7□□□□□ -0.86
SLC13A3-202ENST00000290317 ZNF428Q96B54 188 aa9.7□□□□□ -0.86
SLC13A3-202ENST00000290317 BCL2L13Q9BXK5 485 aa9.7□□□□□ -0.86
SLC13A3-202ENST00000290317 SETD1AO15047 1707 aaKnown RBP9.7□□□□□ -0.86
SLC13A3-202ENST00000290317 PLEKHF1Q96S99 279 aa9.69□□□□□ -0.86
SLC13A3-202ENST00000290317 RTL1A6NKG5 1358 aa9.69□□□□□ -0.86
SLC13A3-202ENST00000290317 DDRGK1Q96HY6 314 aa9.69□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 120.8 ms