RNA–Protein interactions for RNA: ENST00000281142.9

SCLT1-201, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS P3 TSL 2 BASIC

Gene SCLT1, Length 3,055 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-201ENST00000281142 RUNDC1Q96C34 613 aa14.31□□□□□ -0.12
SCLT1-201ENST00000281142 CDC42BPGQ6DT37 1551 aa14.31□□□□□ -0.12
SCLT1-201ENST00000281142 USP32Q8NFA0 1604 aa14.31□□□□□ -0.12
SCLT1-201ENST00000281142 SLC24A1O60721 1099 aa14.31□□□□□ -0.12
SCLT1-201ENST00000281142 MORC1Q86VD1 984 aa14.31□□□□□ -0.12
SCLT1-201ENST00000281142 SRPK2P78362 688 aaKnown RBP14.3□□□□□ -0.12
SCLT1-201ENST00000281142 C14orf37Q86TY3 774 aa14.3□□□□□ -0.12
SCLT1-201ENST00000281142 ZNF692Q9BU19 519 aaPredicted RBP14.3□□□□□ -0.12
SCLT1-201ENST00000281142 MVPQ14764 893 aaKnown RBP14.3□□□□□ -0.12
SCLT1-201ENST00000281142 TSR2Q969E8 191 aaKnown RBP14.3□□□□□ -0.12
SCLT1-201ENST00000281142 SLC12A5Q9H2X9 1139 aa14.3□□□□□ -0.12
SCLT1-201ENST00000281142 NSD3Q9BZ95 1437 aa14.29□□□□□ -0.12
SCLT1-201ENST00000281142 NUTM2FA1L443 756 aa14.29□□□□□ -0.12
SCLT1-201ENST00000281142 IQSEC2Q5JU85 1478 aa14.29□□□□□ -0.12
SCLT1-201ENST00000281142 PLEKHG5O94827 1062 aa14.29□□□□□ -0.12
SCLT1-201ENST00000281142 NGEFQ8N5V2 710 aa14.29□□□□□ -0.12
SCLT1-201ENST00000281142 PHF23Q9BUL5 403 aaPredicted RBP14.29□□□□□ -0.12
SCLT1-201ENST00000281142 GRPEL1Q9HAV7 217 aa14.29□□□□□ -0.12
SCLT1-201ENST00000281142 NCOA3Q9Y6Q9 1424 aa14.29□□□□□ -0.12
SCLT1-201ENST00000281142 ATP7BP35670 1465 aa14.28□□□□□ -0.12
SCLT1-201ENST00000281142 GAS2L3Q86XJ1 694 aa14.28□□□□□ -0.12
SCLT1-201ENST00000281142 PODXL2Q9NZ53 605 aa14.28□□□□□ -0.12
SCLT1-201ENST00000281142 PRR36Q9H6K5 1346 aa14.28□□□□□ -0.12
SCLT1-201ENST00000281142 MTHFSP49914 203 aa14.28□□□□□ -0.12
SCLT1-201ENST00000281142 FTSJ3Q8IY81 847 aaKnown RBP14.28□□□□□ -0.12
SCLT1-201ENST00000281142 TOPAZ1Q8N9V7 1692 aa14.28□□□□□ -0.12
SCLT1-201ENST00000281142 MRE11P49959 708 aa14.27□□□□□ -0.12
SCLT1-201ENST00000281142 C19orf44Q9H6X5 657 aa14.27□□□□□ -0.12
SCLT1-201ENST00000281142 FOXD4L1Q9NU39 408 aa14.27□□□□□ -0.13
SCLT1-201ENST00000281142 DZIP1LQ8IYY4 767 aaKnown RBP14.26□□□□□ -0.13
SCLT1-201ENST00000281142 ZKSCAN2Q63HK3 967 aa14.26□□□□□ -0.13
SCLT1-201ENST00000281142 WDR63Q8IWG1 891 aa14.26□□□□□ -0.13
SCLT1-201ENST00000281142 HSCBQ8IWL3 235 aa14.26□□□□□ -0.13
SCLT1-201ENST00000281142 NUDT16Q96DE0 195 aaKnown RBP14.26□□□□□ -0.13
SCLT1-201ENST00000281142 PUS7Q96PZ0 661 aaKnown RBP14.26□□□□□ -0.13
SCLT1-201ENST00000281142 MYH16Q9H6N6 1097 aa14.26□□□□□ -0.13
SCLT1-201ENST00000281142 MSH6P52701 1360 aa14.25□□□□□ -0.13
SCLT1-201ENST00000281142 ITSN1Q15811 1721 aa14.25□□□□□ -0.13
SCLT1-201ENST00000281142 ITPRIPQ8IWB1 547 aa14.25□□□□□ -0.13
SCLT1-201ENST00000281142 ATAD2Q6PL18 1390 aa14.24□□□□□ -0.13
SCLT1-201ENST00000281142 ESPNB1AK53 854 aa14.24□□□□□ -0.13
SCLT1-201ENST00000281142 TRIM27P14373 513 aa14.24□□□□□ -0.13
SCLT1-201ENST00000281142 DCCP43146 1447 aa14.24□□□□□ -0.13
SCLT1-201ENST00000281142 TNPO1Q92973 898 aaKnown RBP14.24□□□□□ -0.13
SCLT1-201ENST00000281142 SMC4Q9NTJ3 1288 aa14.24□□□□□ -0.13
SCLT1-201ENST00000281142 EXOSC9Q06265 439 aaKnown RBP14.23□□□□□ -0.13
SCLT1-201ENST00000281142 PPIP5K1Q6PFW1 1433 aa14.23□□□□□ -0.13
SCLT1-201ENST00000281142 U2AF1L5P0DN76 240 aaPredicted RBP14.23□□□□□ -0.13
SCLT1-201ENST00000281142 U2AF1Q01081 240 aaKnown RBP eCLIP14.23□□□□□ -0.13
SCLT1-201ENST00000281142 AAMPQ13685 434 aa14.23□□□□□ -0.13
SCLT1-201ENST00000281142 CABP1Q9NZU7 370 aa14.23□□□□□ -0.13
SCLT1-201ENST00000281142 ANKARQ7Z5J8 1434 aa14.22□□□□□ -0.13
SCLT1-201ENST00000281142 CD2BP2O95400 341 aaKnown RBP14.22□□□□□ -0.13
SCLT1-201ENST00000281142 DDIT3P35638 169 aa14.22□□□□□ -0.13
SCLT1-201ENST00000281142 CD163L1Q9NR16 1453 aa14.22□□□□□ -0.13
SCLT1-201ENST00000281142 MST1RQ04912 1400 aa14.22□□□□□ -0.13
SCLT1-201ENST00000281142 ATF3P18847 181 aa14.22□□□□□ -0.13
SCLT1-201ENST00000281142 SSH1Q8WYL5 1049 aa14.22□□□□□ -0.13
SCLT1-201ENST00000281142 CCDC61Q9Y6R9 512 aa14.22□□□□□ -0.13
SCLT1-201ENST00000281142 DDX11L8A8MPP1 907 aa14.21□□□□□ -0.13
SCLT1-201ENST00000281142 LNPKQ9C0E8 428 aa14.21□□□□□ -0.13
SCLT1-201ENST00000281142 C1orf167Q5SNV9 1468 aa14.2□□□□□ -0.14
SCLT1-201ENST00000281142 CADPS2Q86UW7 1296 aa14.2□□□□□ -0.14
SCLT1-201ENST00000281142 TMEM57Q8N5G2 664 aa14.2□□□□□ -0.14
SCLT1-201ENST00000281142 AKAP12Q02952 1782 aa14.2□□□□□ -0.14
SCLT1-201ENST00000281142 NOB1Q9ULX3 412 aaKnown RBP14.2□□□□□ -0.14
SCLT1-201ENST00000281142 HDAC1Q13547 482 aaPredicted RBP14.19□□□□□ -0.14
SCLT1-201ENST00000281142 CCDC27Q2M243 656 aa14.19□□□□□ -0.14
SCLT1-201ENST00000281142 ORAI2Q96SN7 254 aa14.19□□□□□ -0.14
SCLT1-201ENST00000281142 RBM42Q9BTD8 480 aaKnown RBP14.19□□□□□ -0.14
SCLT1-201ENST00000281142 A0A1W2PP64 1363 aa14.19□□□□□ -0.14
SCLT1-201ENST00000281142 HSP90AB1P08238 724 aaKnown RBP14.18□□□□□ -0.14
SCLT1-201ENST00000281142 ESCO1Q5FWF5 840 aa14.18□□□□□ -0.14
SCLT1-201ENST00000281142 SMC5Q8IY18 1101 aa14.18□□□□□ -0.14
SCLT1-201ENST00000281142 ANKRD36BQ8N2N9 1353 aa14.18□□□□□ -0.14
SCLT1-201ENST00000281142 MON2Q7Z3U7 1717 aa14.17□□□□□ -0.14
SCLT1-201ENST00000281142 TRIM44Q96DX7 344 aaPredicted RBP14.17□□□□□ -0.14
SCLT1-201ENST00000281142 KIF2CQ99661 725 aa14.17□□□□□ -0.14
SCLT1-201ENST00000281142 PLEKHG3A1L390 1219 aa14.17□□□□□ -0.14
SCLT1-201ENST00000281142 CPSF1Q10570 1443 aaKnown RBP14.17□□□□□ -0.14
SCLT1-201ENST00000281142 ATF7IPQ6VMQ6 1270 aa14.17□□□□□ -0.14
SCLT1-201ENST00000281142 ACEP12821 1306 aa14.16□□□□□ -0.14
SCLT1-201ENST00000281142 U2SURPO15042 1029 aaKnown RBP14.16□□□□□ -0.14
SCLT1-201ENST00000281142 RBM25P49756 843 aaKnown RBP14.16□□□□□ -0.14
SCLT1-201ENST00000281142 CFAP53Q96M91 514 aa14.16□□□□□ -0.14
SCLT1-201ENST00000281142 SLAIN2Q9P270 581 aa14.16□□□□□ -0.14
SCLT1-201ENST00000281142 DDX19BQ9UMR2 479 aa14.16□□□□□ -0.14
SCLT1-201ENST00000281142 RAB3GAP1Q15042 981 aa14.16□□□□□ -0.14
SCLT1-201ENST00000281142 KIF1AQ12756 1690 aa14.15□□□□□ -0.14
SCLT1-201ENST00000281142 SSFA2P28290 1259 aa14.15□□□□□ -0.14
SCLT1-201ENST00000281142 ZBTB40Q9NUA8 1239 aa14.15□□□□□ -0.14
SCLT1-201ENST00000281142 PHF8Q9UPP1 1060 aa14.15□□□□□ -0.14
SCLT1-201ENST00000281142 TRIM35Q9UPQ4 493 aa14.15□□□□□ -0.14
SCLT1-201ENST00000281142 NRKQ7Z2Y5 1582 aa14.14□□□□□ -0.15
SCLT1-201ENST00000281142 C1orf115Q9H7X2 142 aa14.14□□□□□ -0.15
SCLT1-201ENST00000281142 TERF2IPQ9NYB0 399 aa14.14□□□□□ -0.15
SCLT1-201ENST00000281142 AK9Q5TCS8 1911 aa14.14□□□□□ -0.15
SCLT1-201ENST00000281142 SNX21Q969T3 373 aa14.14□□□□□ -0.15
SCLT1-201ENST00000281142 NUCB1Q02818 461 aa14.13□□□□□ -0.15
SCLT1-201ENST00000281142 TMPOP42166 694 aaKnown RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms