RNA–Protein interactions for RNA: ENST00000279027.8

SLC13A3-201, Transcript of solute carrier family 13 member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC13A3, Length 4,017 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC13A3-201ENST00000279027 CASC1Q6TDU7 716 aa14.76□□□□□ -0.05
SLC13A3-201ENST00000279027 PSME1Q06323 249 aa14.76□□□□□ -0.05
SLC13A3-201ENST00000279027 IFT57Q9NWB7 429 aa14.76□□□□□ -0.05
SLC13A3-201ENST00000279027 MROH2AA6NES4 1674 aa14.75□□□□□ -0.05
SLC13A3-201ENST00000279027 TNRQ92752 1358 aa14.75□□□□□ -0.05
SLC13A3-201ENST00000279027 HAP1P54257 671 aaPredicted RBP14.75□□□□□ -0.05
SLC13A3-201ENST00000279027 RILPL2Q969X0 211 aa14.75□□□□□ -0.05
SLC13A3-201ENST00000279027 CFAP44Q96MT7 982 aa14.75□□□□□ -0.05
SLC13A3-201ENST00000279027 ESCO1Q5FWF5 840 aa14.75□□□□□ -0.05
SLC13A3-201ENST00000279027 ZBTB40Q9NUA8 1239 aa14.75□□□□□ -0.05
SLC13A3-201ENST00000279027 MRPL50Q8N5N7 158 aaKnown RBP14.74□□□□□ -0.05
SLC13A3-201ENST00000279027 ALDH1L2Q3SY69 923 aa14.74□□□□□ -0.05
SLC13A3-201ENST00000279027 C16orf71Q8IYS4 520 aaPredicted RBP14.74□□□□□ -0.05
SLC13A3-201ENST00000279027 GLI2P10070 1586 aa14.73□□□□□ -0.05
SLC13A3-201ENST00000279027 TULP4Q9NRJ4 1543 aa14.73□□□□□ -0.05
SLC13A3-201ENST00000279027 MROH1Q8NDA8 1641 aa14.73□□□□□ -0.05
SLC13A3-201ENST00000279027 FOXD4L6Q3SYB3 417 aaPredicted RBP14.72□□□□□ -0.05
SLC13A3-201ENST00000279027 FOXD4L3Q6VB84 417 aaPredicted RBP14.72□□□□□ -0.05
SLC13A3-201ENST00000279027 TBC1D32Q96NH3 1257 aa14.72□□□□□ -0.05
SLC13A3-201ENST00000279027 IL16Q14005 1332 aa14.72□□□□□ -0.05
SLC13A3-201ENST00000279027 TSHZ3Q63HK5 1081 aa14.72□□□□□ -0.05
SLC13A3-201ENST00000279027 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.72□□□□□ -0.05
SLC13A3-201ENST00000279027 QRICH2Q9H0J4 1663 aa14.72□□□□□ -0.05
SLC13A3-201ENST00000279027 THEMISQ8N1K5 641 aaPredicted RBP14.71□□□□□ -0.05
SLC13A3-201ENST00000279027 EXOC6BQ9Y2D4 811 aa14.71□□□□□ -0.05
SLC13A3-201ENST00000279027 A0A0G2JS52 829 aa14.71□□□□□ -0.05
SLC13A3-201ENST00000279027 HMMRO75330 724 aa14.71□□□□□ -0.05
SLC13A3-201ENST00000279027 PHF23Q9BUL5 403 aaPredicted RBP14.7□□□□□ -0.06
SLC13A3-201ENST00000279027 PRR36Q9H6K5 1346 aa14.7□□□□□ -0.06
SLC13A3-201ENST00000279027 VWDEQ8N2E2 1590 aa14.7□□□□□ -0.06
SLC13A3-201ENST00000279027 FRMPD1Q5SYB0 1578 aa14.7□□□□□ -0.06
SLC13A3-201ENST00000279027 HDAC1Q13547 482 aaPredicted RBP14.7□□□□□ -0.06
SLC13A3-201ENST00000279027 MEIS3Q99687 375 aa14.7□□□□□ -0.06
SLC13A3-201ENST00000279027 RBM42Q9BTD8 480 aaKnown RBP14.7□□□□□ -0.06
SLC13A3-201ENST00000279027 PPP6R1Q9UPN7 881 aa14.7□□□□□ -0.06
SLC13A3-201ENST00000279027 GCC1Q96CN9 775 aa14.7□□□□□ -0.06
SLC13A3-201ENST00000279027 CSB-PGBD3P0DP91 1061 aa14.69□□□□□ -0.06
SLC13A3-201ENST00000279027 TEFQ10587 303 aa14.69□□□□□ -0.06
SLC13A3-201ENST00000279027 MTHFSDQ2M296 383 aaKnown RBP14.69□□□□□ -0.06
SLC13A3-201ENST00000279027 CHMP5Q9NZZ3 219 aa14.69□□□□□ -0.06
SLC13A3-201ENST00000279027 DEPDC5O75140 1603 aa14.68□□□□□ -0.06
SLC13A3-201ENST00000279027 ZBTB7BO15156 539 aaPredicted RBP14.68□□□□□ -0.06
SLC13A3-201ENST00000279027 ADGRB1O14514 1584 aa14.68□□□□□ -0.06
SLC13A3-201ENST00000279027 NUCB1Q02818 461 aa14.68□□□□□ -0.06
SLC13A3-201ENST00000279027 LMTK2Q8IWU2 1503 aa14.68□□□□□ -0.06
SLC13A3-201ENST00000279027 MAP3K19Q56UN5 1328 aa14.68□□□□□ -0.06
SLC13A3-201ENST00000279027 ANXA1P04083 346 aa14.68□□□□□ -0.06
SLC13A3-201ENST00000279027 G2E3Q7L622 706 aa14.67□□□□□ -0.06
SLC13A3-201ENST00000279027 SMC5Q8IY18 1101 aa14.67□□□□□ -0.06
SLC13A3-201ENST00000279027 GOLGA6L22H0YM25 854 aa14.67□□□□□ -0.06
SLC13A3-201ENST00000279027 OTUD7AQ8TE49 926 aaPredicted RBP14.67□□□□□ -0.06
SLC13A3-201ENST00000279027 CDC45O75419 566 aa14.67□□□□□ -0.06
SLC13A3-201ENST00000279027 KCNA6P17658 529 aa14.67□□□□□ -0.06
SLC13A3-201ENST00000279027 MAP4K4O95819 1239 aaPredicted RBP14.66□□□□□ -0.06
SLC13A3-201ENST00000279027 DIP2CQ9Y2E4 1556 aa14.66□□□□□ -0.06
SLC13A3-201ENST00000279027 CFAP74Q9C0B2 1584 aa14.66□□□□□ -0.06
SLC13A3-201ENST00000279027 AIMP1Q12904 312 aaKnown RBP14.66□□□□□ -0.06
SLC13A3-201ENST00000279027 GAS2L2Q8NHY3 880 aa14.66□□□□□ -0.06
SLC13A3-201ENST00000279027 IL1RAPL2Q9NP60 686 aa14.66□□□□□ -0.06
SLC13A3-201ENST00000279027 NRXN1Q9ULB1 1477 aa14.66□□□□□ -0.06
SLC13A3-201ENST00000279027 TBC1D9Q6ZT07 1266 aa14.66□□□□□ -0.06
SLC13A3-201ENST00000279027 CCDC9Q9Y3X0 531 aaKnown RBP14.66□□□□□ -0.06
SLC13A3-201ENST00000279027 EYA1Q99502 592 aa14.65□□□□□ -0.06
SLC13A3-201ENST00000279027 NEXMIFQ5QGS0 1516 aa14.65□□□□□ -0.06
SLC13A3-201ENST00000279027 HDGFL1Q5TGJ6 251 aa14.65□□□□□ -0.06
SLC13A3-201ENST00000279027 ROBO2Q9HCK4 1378 aa14.65□□□□□ -0.06
SLC13A3-201ENST00000279027 USP19O94966 1318 aa14.65□□□□□ -0.06
SLC13A3-201ENST00000279027 CAMSAP1Q5T5Y3 1602 aa14.64□□□□□ -0.07
SLC13A3-201ENST00000279027 MYOM1P52179 1685 aa14.64□□□□□ -0.07
SLC13A3-201ENST00000279027 GOLGA6L3A6NEY3 463 aa14.64□□□□□ -0.07
SLC13A3-201ENST00000279027 ARHGAP31Q2M1Z3 1444 aa14.64□□□□□ -0.07
SLC13A3-201ENST00000279027 ANO2Q9NQ90 1003 aa14.63□□□□□ -0.07
SLC13A3-201ENST00000279027 ZNF330Q9Y3S2 320 aaPredicted RBP14.63□□□□□ -0.07
SLC13A3-201ENST00000279027 ZFYVE9O95405 1425 aa14.63□□□□□ -0.07
SLC13A3-201ENST00000279027 EDC4Q6P2E9 1401 aaKnown RBP14.63□□□□□ -0.07
SLC13A3-201ENST00000279027 ZC3H6P61129 1189 aaKnown RBP14.63□□□□□ -0.07
SLC13A3-201ENST00000279027 GBP4Q96PP9 640 aa14.63□□□□□ -0.07
SLC13A3-201ENST00000279027 SETBP1Q9Y6X0 1596 aa14.62□□□□□ -0.07
SLC13A3-201ENST00000279027 A2ML1A8K2U0 1454 aa14.62□□□□□ -0.07
SLC13A3-201ENST00000279027 CCDC30Q5VVM6 783 aa14.62□□□□□ -0.07
SLC13A3-201ENST00000279027 MPRIPQ6WCQ1 1025 aa14.62□□□□□ -0.07
SLC13A3-201ENST00000279027 ALKQ9UM73 1620 aa14.62□□□□□ -0.07
SLC13A3-201ENST00000279027 GNAT3A8MTJ3 354 aa14.62□□□□□ -0.07
SLC13A3-201ENST00000279027 TRAK2O60296 914 aa14.62□□□□□ -0.07
SLC13A3-201ENST00000279027 SURF6O75683 361 aaKnown RBP14.62□□□□□ -0.07
SLC13A3-201ENST00000279027 PTPRMP28827 1452 aa14.61□□□□□ -0.07
SLC13A3-201ENST00000279027 UBTFL1P0CB47 393 aaPredicted RBP14.61□□□□□ -0.07
SLC13A3-201ENST00000279027 C1orf141Q5JVX7 400 aa14.61□□□□□ -0.07
SLC13A3-201ENST00000279027 TMEM2Q9UHN6 1383 aa14.61□□□□□ -0.07
SLC13A3-201ENST00000279027 GNAI2P04899 355 aa14.61□□□□□ -0.07
SLC13A3-201ENST00000279027 PIK3C2BO00750 1634 aa14.61□□□□□ -0.07
SLC13A3-201ENST00000279027 MCM4P33991 863 aa14.61□□□□□ -0.07
SLC13A3-201ENST00000279027 KCNJ4P48050 445 aa14.61□□□□□ -0.07
SLC13A3-201ENST00000279027 INTS3Q68E01 1043 aaKnown RBP14.61□□□□□ -0.07
SLC13A3-201ENST00000279027 ZNF530Q6P9A1 599 aaPredicted RBP14.61□□□□□ -0.07
SLC13A3-201ENST00000279027 ANP32BQ92688 251 aaKnown RBP14.61□□□□□ -0.07
SLC13A3-201ENST00000279027 LRRC59Q96AG4 307 aaKnown RBP14.61□□□□□ -0.07
SLC13A3-201ENST00000279027 TAOK2Q9UL54 1235 aa14.61□□□□□ -0.07
SLC13A3-201ENST00000279027 PHF8Q9UPP1 1060 aa14.6□□□□□ -0.07
SLC13A3-201ENST00000279027 NLRP2Q9NX02 1062 aa14.6□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms