RNA–Protein interactions for RNA: ENST00000277541.6

NOTCH1-201, Transcript of notch 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NOTCH1, Length 9,371 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NOTCH1-201ENST00000277541 CADPSQ9ULU8 1353 aa16.09■□□□□ 0.17
NOTCH1-201ENST00000277541 TIAM1Q13009 1591 aa16.09■□□□□ 0.17
NOTCH1-201ENST00000277541 SHTN1A0MZ66 631 aa16.09■□□□□ 0.17
NOTCH1-201ENST00000277541 SMTNL1A8MU46 457 aa16.09■□□□□ 0.17
NOTCH1-201ENST00000277541 MVPQ14764 893 aaKnown RBP16.08■□□□□ 0.17
NOTCH1-201ENST00000277541 FAM193AP78312 1265 aa16.08■□□□□ 0.17
NOTCH1-201ENST00000277541 RIC3Q7Z5B4 369 aa16.08■□□□□ 0.17
NOTCH1-201ENST00000277541 FAM177A1Q8N128 213 aaPredicted RBP16.08■□□□□ 0.17
NOTCH1-201ENST00000277541 MAP3K11Q16584 847 aa16.08■□□□□ 0.17
NOTCH1-201ENST00000277541 CHD1LQ86WJ1 897 aa16.08■□□□□ 0.17
NOTCH1-201ENST00000277541 LARP1BQ659C4 914 aaKnown RBP16.08■□□□□ 0.16
NOTCH1-201ENST00000277541 TCP11L2Q8N4U5 519 aa16.08■□□□□ 0.16
NOTCH1-201ENST00000277541 TBC1D2BQ9UPU7 963 aa16.08■□□□□ 0.16
NOTCH1-201ENST00000277541 KIF18AQ8NI77 898 aa16.08■□□□□ 0.16
NOTCH1-201ENST00000277541 ANKRD50Q9ULJ7 1429 aa16.08■□□□□ 0.16
NOTCH1-201ENST00000277541 SLC3A2P08195 630 aaKnown RBP16.08■□□□□ 0.16
NOTCH1-201ENST00000277541 PPP2R1AP30153 589 aa16.07■□□□□ 0.16
NOTCH1-201ENST00000277541 UPF3BQ9BZI7 483 aaKnown RBP16.07■□□□□ 0.16
NOTCH1-201ENST00000277541 MCM5P33992 734 aa16.07■□□□□ 0.16
NOTCH1-201ENST00000277541 UBE2Q2Q8WVN8 375 aa16.07■□□□□ 0.16
NOTCH1-201ENST00000277541 CCT4P50991 539 aaKnown RBP16.07■□□□□ 0.16
NOTCH1-201ENST00000277541 CCDC148Q8NFR7 591 aa16.07■□□□□ 0.16
NOTCH1-201ENST00000277541 RBM33Q96EV2 1170 aaKnown RBP16.07■□□□□ 0.16
NOTCH1-201ENST00000277541 GBP2P32456 591 aaPredicted RBP16.06■□□□□ 0.16
NOTCH1-201ENST00000277541 SURF6O75683 361 aaKnown RBP16.06■□□□□ 0.16
NOTCH1-201ENST00000277541 NEFHP12036 1026 aa16.06■□□□□ 0.16
NOTCH1-201ENST00000277541 PTPN14Q15678 1187 aa16.06■□□□□ 0.16
NOTCH1-201ENST00000277541 CDKL5O76039 1030 aa16.06■□□□□ 0.16
NOTCH1-201ENST00000277541 CRACR2AQ9BSW2 395 aa16.06■□□□□ 0.16
NOTCH1-201ENST00000277541 EZRP15311 586 aaKnown RBP16.06■□□□□ 0.16
NOTCH1-201ENST00000277541 ZSCAN12O43309 604 aa16.05■□□□□ 0.16
NOTCH1-201ENST00000277541 CCDC183Q5T5S1 534 aa16.05■□□□□ 0.16
NOTCH1-201ENST00000277541 TRIM22Q8IYM9 498 aa16.05■□□□□ 0.16
NOTCH1-201ENST00000277541 SLC26A8Q96RN1 970 aa16.05■□□□□ 0.16
NOTCH1-201ENST00000277541 ARHGAP5Q13017 1502 aa16.05■□□□□ 0.16
NOTCH1-201ENST00000277541 DYNC1I1O14576 645 aa16.05■□□□□ 0.16
NOTCH1-201ENST00000277541 C1orf115Q9H7X2 142 aa16.05■□□□□ 0.16
NOTCH1-201ENST00000277541 PSME1Q06323 249 aa16.05■□□□□ 0.16
NOTCH1-201ENST00000277541 SFPQP23246 707 aaKnown RBP eCLIP16.05■□□□□ 0.16
NOTCH1-201ENST00000277541 WDR63Q8IWG1 891 aa16.05■□□□□ 0.16
NOTCH1-201ENST00000277541 ZSCAN31Q96LW9 406 aaPredicted RBP16.05■□□□□ 0.16
NOTCH1-201ENST00000277541 JPH4Q96JJ6 628 aa16.05■□□□□ 0.16
NOTCH1-201ENST00000277541 FANCD2Q9BXW9 1451 aa16.04■□□□□ 0.16
NOTCH1-201ENST00000277541 CBX1P83916 185 aa16.04■□□□□ 0.16
NOTCH1-201ENST00000277541 LRRFIP2Q9Y608 721 aaKnown RBP16.04■□□□□ 0.16
NOTCH1-201ENST00000277541 EPB41L2O43491 1005 aaKnown RBP16.04■□□□□ 0.16
NOTCH1-201ENST00000277541 ARHGAP29Q52LW3 1261 aa16.04■□□□□ 0.16
NOTCH1-201ENST00000277541 PPP6R1Q9UPN7 881 aa16.04■□□□□ 0.16
NOTCH1-201ENST00000277541 NKTRP30414 1462 aaKnown RBP16.04■□□□□ 0.16
NOTCH1-201ENST00000277541 MTHFSP49914 203 aa16.03■□□□□ 0.16
NOTCH1-201ENST00000277541 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.03■□□□□ 0.16
NOTCH1-201ENST00000277541 PRDM10Q9NQV6 1147 aa16.03■□□□□ 0.16
NOTCH1-201ENST00000277541 ATF7IPQ6VMQ6 1270 aa16.03■□□□□ 0.16
NOTCH1-201ENST00000277541 MPNDQ8N594 471 aa16.03■□□□□ 0.16
NOTCH1-201ENST00000277541 DNAJC2Q99543 621 aaKnown RBP16.03■□□□□ 0.16
NOTCH1-201ENST00000277541 FILIP1Q7Z7B0 1213 aa16.03■□□□□ 0.16
NOTCH1-201ENST00000277541 CASQ1P31415 396 aa16.02■□□□□ 0.16
NOTCH1-201ENST00000277541 MAPK8IP2Q13387 824 aaPredicted RBP16.02■□□□□ 0.16
NOTCH1-201ENST00000277541 TAX1BP1Q86VP1 789 aa16.02■□□□□ 0.16
NOTCH1-201ENST00000277541 GAPVD1Q14C86 1478 aa16.02■□□□□ 0.16
NOTCH1-201ENST00000277541 BCAR3O75815 825 aa16.02■□□□□ 0.16
NOTCH1-201ENST00000277541 TWISTNBQ3B726 338 aaPredicted RBP16.02■□□□□ 0.16
NOTCH1-201ENST00000277541 KIAA1328Q86T90 577 aa16.02■□□□□ 0.16
NOTCH1-201ENST00000277541 CNKSR2Q8WXI2 1034 aa16.02■□□□□ 0.16
NOTCH1-201ENST00000277541 PNISRQ8TF01 805 aaKnown RBP16.02■□□□□ 0.15
NOTCH1-201ENST00000277541 KRT18P05783 430 aaKnown RBP16.01■□□□□ 0.15
NOTCH1-201ENST00000277541 PTPRGP23470 1445 aa16.01■□□□□ 0.15
NOTCH1-201ENST00000277541 PDRG1Q9NUG6 133 aa16.01■□□□□ 0.15
NOTCH1-201ENST00000277541 ERBINQ96RT1 1412 aa16.01■□□□□ 0.15
NOTCH1-201ENST00000277541 MICALCLQ6ZW33 695 aa16■□□□□ 0.15
NOTCH1-201ENST00000277541 ZNF397Q8NF99 534 aaPredicted RBP16■□□□□ 0.15
NOTCH1-201ENST00000277541 KIF5CO60282 957 aa16■□□□□ 0.15
NOTCH1-201ENST00000277541 STK3Q13188 491 aa16■□□□□ 0.15
NOTCH1-201ENST00000277541 GAS2L2Q8NHY3 880 aa16■□□□□ 0.15
NOTCH1-201ENST00000277541 KRT32Q14532 448 aa16■□□□□ 0.15
NOTCH1-201ENST00000277541 FYB1O15117 783 aa16■□□□□ 0.15
NOTCH1-201ENST00000277541 NEMFO60524 1076 aa16■□□□□ 0.15
NOTCH1-201ENST00000277541 FGD5Q6ZNL6 1462 aa16■□□□□ 0.15
NOTCH1-201ENST00000277541 EXOSC9Q06265 439 aaKnown RBP16■□□□□ 0.15
NOTCH1-201ENST00000277541 ATP2B1P20020 1258 aa15.99■□□□□ 0.15
NOTCH1-201ENST00000277541 AIMP1Q12904 312 aaKnown RBP15.99■□□□□ 0.15
NOTCH1-201ENST00000277541 POTEB2H3BUK9 544 aa15.99■□□□□ 0.15
NOTCH1-201ENST00000277541 MSH5O43196 834 aa15.99■□□□□ 0.15
NOTCH1-201ENST00000277541 HFM1A2PYH4 1435 aa15.99■□□□□ 0.15
NOTCH1-201ENST00000277541 PPP4R3BQ5MIZ7 849 aa15.99■□□□□ 0.15
NOTCH1-201ENST00000277541 IMMTQ16891 758 aaKnown RBP15.99■□□□□ 0.15
NOTCH1-201ENST00000277541 CFAP100Q494V2 611 aa15.99■□□□□ 0.15
NOTCH1-201ENST00000277541 BLOC1S2Q6QNY1 142 aa15.98■□□□□ 0.15
NOTCH1-201ENST00000277541 RAPGEF4Q8WZA2 1011 aa15.98■□□□□ 0.15
NOTCH1-201ENST00000277541 ANKRD62A6NC57 917 aa15.98■□□□□ 0.15
NOTCH1-201ENST00000277541 CASTP20810 708 aaKnown RBP15.98■□□□□ 0.15
NOTCH1-201ENST00000277541 SYTL4Q96C24 671 aaPredicted RBP15.97■□□□□ 0.15
NOTCH1-201ENST00000277541 CCDC69A6NI79 296 aa15.97■□□□□ 0.15
NOTCH1-201ENST00000277541 JAKMIP3Q5VZ66 844 aa15.97■□□□□ 0.15
NOTCH1-201ENST00000277541 CLIP2Q9UDT6 1046 aa15.97■□□□□ 0.15
NOTCH1-201ENST00000277541 PRIMPOLQ96LW4 560 aa15.97■□□□□ 0.15
NOTCH1-201ENST00000277541 ZNF428Q96B54 188 aa15.97■□□□□ 0.15
NOTCH1-201ENST00000277541 KIAA1107Q9UPP5 1409 aa15.97■□□□□ 0.15
NOTCH1-201ENST00000277541 ATAD2BQ9ULI0 1458 aa15.97■□□□□ 0.15
NOTCH1-201ENST00000277541 NOL7Q9UMY1 257 aaKnown RBP15.97■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms