RNA–Protein interactions for RNA: ENST00000274721.7

GFRA3-201, Transcript of GDNF family receptor alpha 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene GFRA3, Length 2,039 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA3-201ENST00000274721 SOX12O15370 315 aa27.7■■■□□ 2.02
GFRA3-201ENST00000274721 RGPD1P0DJD0 1748 aa27.69■■■□□ 2.02
GFRA3-201ENST00000274721 KIF24Q5T7B8 1368 aa27.69■■■□□ 2.02
GFRA3-201ENST00000274721 TSR2Q969E8 191 aaKnown RBP27.68■■■□□ 2.02
GFRA3-201ENST00000274721 C19orf44Q9H6X5 657 aa27.68■■■□□ 2.02
GFRA3-201ENST00000274721 PAK3O75914 559 aaPredicted RBP27.67■■■□□ 2.02
GFRA3-201ENST00000274721 SULT6B1Q6IMI4 303 aa27.67■■■□□ 2.02
GFRA3-201ENST00000274721 KDM4FA0A1W2PPD8 638 aa27.66■■■□□ 2.02
GFRA3-201ENST00000274721 PDE3AQ14432 1141 aa27.66■■■□□ 2.02
GFRA3-201ENST00000274721 PSME1Q06323 249 aa27.65■■■□□ 2.02
GFRA3-201ENST00000274721 AEBP1Q8IUX7 1158 aa27.65■■■□□ 2.02
GFRA3-201ENST00000274721 ORAI2Q96SN7 254 aa27.65■■■□□ 2.02
GFRA3-201ENST00000274721 NUTM2GQ5VZR2 741 aa27.65■■■□□ 2.02
GFRA3-201ENST00000274721 AMPHP49418 695 aa27.63■■■□□ 2.01
GFRA3-201ENST00000274721 HSPA2P54652 639 aa27.63■■■□□ 2.01
GFRA3-201ENST00000274721 EXOSC9Q06265 439 aaKnown RBP27.63■■■□□ 2.01
GFRA3-201ENST00000274721 ARHGEF10O15013 1369 aa27.63■■■□□ 2.01
GFRA3-201ENST00000274721 NCOA3Q9Y6Q9 1424 aa27.63■■■□□ 2.01
GFRA3-201ENST00000274721 CALD1Q05682 793 aaKnown RBP27.62■■■□□ 2.01
GFRA3-201ENST00000274721 DLG5Q8TDM6 1919 aa27.61■■■□□ 2.01
GFRA3-201ENST00000274721 STRCP1A6NGW2 1772 aa27.61■■■□□ 2.01
GFRA3-201ENST00000274721 LMOD3Q0VAK6 560 aa27.61■■■□□ 2.01
GFRA3-201ENST00000274721 C1orf167Q5SNV9 1468 aa27.6■■■□□ 2.01
GFRA3-201ENST00000274721 KDRP35968 1356 aa27.6■■■□□ 2.01
GFRA3-201ENST00000274721 HOXC9P31274 260 aa27.6■■■□□ 2.01
GFRA3-201ENST00000274721 TMEM94Q12767 1356 aa27.59■■■□□ 2.01
GFRA3-201ENST00000274721 FOXO3O43524 673 aa27.58■■■□□ 2.01
GFRA3-201ENST00000274721 ZNF853P0CG23 659 aa27.58■■■□□ 2.01
GFRA3-201ENST00000274721 IGSF1Q8N6C5 1336 aa27.58■■■□□ 2.01
GFRA3-201ENST00000274721 EYA1Q99502 592 aa27.57■■■□□ 2
GFRA3-201ENST00000274721 THUMPD2Q9BTF0 503 aaKnown RBP27.57■■■□□ 2
GFRA3-201ENST00000274721 IFT57Q9NWB7 429 aa27.57■■■□□ 2
GFRA3-201ENST00000274721 DCCP43146 1447 aa27.56■■■□□ 2
GFRA3-201ENST00000274721 LMTK3Q96Q04 1460 aa27.56■■■□□ 2
GFRA3-201ENST00000274721 RTL1A6NKG5 1358 aa27.55■■■□□ 2
GFRA3-201ENST00000274721 NFAT5O94916 1531 aa27.55■■■□□ 2
GFRA3-201ENST00000274721 GNAI1P63096 354 aa27.55■■■□□ 2
GFRA3-201ENST00000274721 FRAT1Q92837 279 aaPredicted RBP27.54■■■□□ 2
GFRA3-201ENST00000274721 BCL2L13Q9BXK5 485 aa27.54■■■□□ 2
GFRA3-201ENST00000274721 CANXP27824 592 aaKnown RBP27.53■■■□□ 2
GFRA3-201ENST00000274721 KCNH5Q8NCM2 988 aa27.53■■■□□ 2
GFRA3-201ENST00000274721 KIF1AQ12756 1690 aa27.53■■■□□ 2
GFRA3-201ENST00000274721 CFAP44Q96MT7 982 aa27.52■■■□□ 2
GFRA3-201ENST00000274721 MST1RQ04912 1400 aa27.52■■■□□ 2
GFRA3-201ENST00000274721 FAM83GA6ND36 823 aa27.51■■■□□ 2
GFRA3-201ENST00000274721 ATF3P18847 181 aa27.51■■□□□ 1.99
GFRA3-201ENST00000274721 PANK1Q8TE04 598 aa27.51■■□□□ 1.99
GFRA3-201ENST00000274721 SSH1Q8WYL5 1049 aa27.51■■□□□ 1.99
GFRA3-201ENST00000274721 IP6K1Q92551 441 aa27.5■■□□□ 1.99
GFRA3-201ENST00000274721 ZNF428Q96B54 188 aa27.5■■□□□ 1.99
GFRA3-201ENST00000274721 TRPM3Q9HCF6 1732 aaPredicted RBP27.5■■□□□ 1.99
GFRA3-201ENST00000274721 KRT28Q7Z3Y7 464 aa27.5■■□□□ 1.99
GFRA3-201ENST00000274721 KDM2BQ8NHM5 1336 aa27.49■■□□□ 1.99
GFRA3-201ENST00000274721 LAS1LQ9Y4W2 734 aaKnown RBP27.49■■□□□ 1.99
GFRA3-201ENST00000274721 LTN1O94822 1766 aa27.49■■□□□ 1.99
GFRA3-201ENST00000274721 STRCQ7RTU9 1775 aa27.49■■□□□ 1.99
GFRA3-201ENST00000274721 XPCQ01831 940 aaPredicted RBP27.48■■□□□ 1.99
GFRA3-201ENST00000274721 MBIPQ9NS73 344 aa27.48■■□□□ 1.99
GFRA3-201ENST00000274721 RBM19Q9Y4C8 960 aaKnown RBP27.48■■□□□ 1.99
GFRA3-201ENST00000274721 RLBP1P12271 317 aa27.47■■□□□ 1.99
GFRA3-201ENST00000274721 DCTN1Q14203 1278 aa27.47■■□□□ 1.99
GFRA3-201ENST00000274721 ALDH1L2Q3SY69 923 aa27.47■■□□□ 1.99
GFRA3-201ENST00000274721 SMC4Q9NTJ3 1288 aa27.47■■□□□ 1.99
GFRA3-201ENST00000274721 COG6Q9Y2V7 657 aa27.47■■□□□ 1.99
GFRA3-201ENST00000274721 SLIT3O75094 1523 aa27.47■■□□□ 1.99
GFRA3-201ENST00000274721 PHRF1Q9P1Y6 1649 aaKnown RBP27.47■■□□□ 1.99
GFRA3-201ENST00000274721 ZKSCAN2Q63HK3 967 aa27.46■■□□□ 1.99
GFRA3-201ENST00000274721 CADPS2Q86UW7 1296 aa27.46■■□□□ 1.99
GFRA3-201ENST00000274721 USP19O94966 1318 aa27.45■■□□□ 1.99
GFRA3-201ENST00000274721 GCP02774 474 aa27.45■■□□□ 1.99
GFRA3-201ENST00000274721 MTHFSDQ2M296 383 aaKnown RBP27.45■■□□□ 1.99
GFRA3-201ENST00000274721 TNNQ9UQP3 1299 aa27.45■■□□□ 1.99
GFRA3-201ENST00000274721 VAMP4O75379 141 aa27.45■■□□□ 1.98
GFRA3-201ENST00000274721 BRPF1P55201 1214 aaPredicted RBP27.45■■□□□ 1.98
GFRA3-201ENST00000274721 AAMPQ13685 434 aa27.45■■□□□ 1.98
GFRA3-201ENST00000274721 CENPQQ7L2Z9 268 aaPredicted RBP27.43■■□□□ 1.98
GFRA3-201ENST00000274721 ARHGEF25Q86VW2 580 aa27.42■■□□□ 1.98
GFRA3-201ENST00000274721 MS4A1P11836 297 aa27.41■■□□□ 1.98
GFRA3-201ENST00000274721 CLUAP1Q96AJ1 413 aa27.41■■□□□ 1.98
GFRA3-201ENST00000274721 CHL1O00533 1208 aa27.41■■□□□ 1.98
GFRA3-201ENST00000274721 TSPYL6Q8N831 410 aa27.41■■□□□ 1.98
GFRA3-201ENST00000274721 GAS2L2Q8NHY3 880 aa27.41■■□□□ 1.98
GFRA3-201ENST00000274721 MCM10Q7L590 875 aa27.4■■□□□ 1.98
GFRA3-201ENST00000274721 MSH6P52701 1360 aa27.4■■□□□ 1.98
GFRA3-201ENST00000274721 DZIP1LQ8IYY4 767 aaKnown RBP27.4■■□□□ 1.98
GFRA3-201ENST00000274721 LTV1Q96GA3 475 aaPredicted RBP27.4■■□□□ 1.98
GFRA3-201ENST00000274721 TRIM27P14373 513 aa27.39■■□□□ 1.98
GFRA3-201ENST00000274721 ATF7IPQ6VMQ6 1270 aa27.39■■□□□ 1.98
GFRA3-201ENST00000274721 NOB1Q9ULX3 412 aaKnown RBP27.39■■□□□ 1.98
GFRA3-201ENST00000274721 XIRP1Q702N8 1843 aaKnown RBP27.39■■□□□ 1.97
GFRA3-201ENST00000274721 ALS2Q96Q42 1657 aa27.39■■□□□ 1.97
GFRA3-201ENST00000274721 KIF16BQ96L93 1317 aa27.39■■□□□ 1.97
GFRA3-201ENST00000274721 CRB1P82279 1406 aa27.38■■□□□ 1.97
GFRA3-201ENST00000274721 HTATSF1O43719 755 aaKnown RBP27.37■■□□□ 1.97
GFRA3-201ENST00000274721 MVPQ14764 893 aaKnown RBP27.36■■□□□ 1.97
GFRA3-201ENST00000274721 LMOD2Q6P5Q4 547 aa27.36■■□□□ 1.97
GFRA3-201ENST00000274721 C8orf58Q8NAV2 365 aa27.36■■□□□ 1.97
GFRA3-201ENST00000274721 IPO8O15397 1037 aaKnown RBP27.36■■□□□ 1.97
GFRA3-201ENST00000274721 TWISTNBQ3B726 338 aaPredicted RBP27.36■■□□□ 1.97
GFRA3-201ENST00000274721 TCERG1O14776 1098 aaKnown RBP27.35■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms