RNA–Protein interactions for RNA: ENST00000267064.8

SMARCC2-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMARCC2, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-201ENST00000267064 NBR1Q14596 966 aa23.76■■□□□ 1.39
SMARCC2-201ENST00000267064 MYO3AQ8NEV4 1616 aa23.76■■□□□ 1.39
SMARCC2-201ENST00000267064 ATP7BP35670 1465 aa23.76■■□□□ 1.39
SMARCC2-201ENST00000267064 ATF7IPQ6VMQ6 1270 aa23.75■■□□□ 1.39
SMARCC2-201ENST00000267064 TSPYL6Q8N831 410 aa23.75■■□□□ 1.39
SMARCC2-201ENST00000267064 PTPRUQ92729 1446 aa23.75■■□□□ 1.39
SMARCC2-201ENST00000267064 C1orf115Q9H7X2 142 aa23.74■■□□□ 1.39
SMARCC2-201ENST00000267064 MBIPQ9NS73 344 aa23.74■■□□□ 1.39
SMARCC2-201ENST00000267064 KRT24Q2M2I5 525 aa23.74■■□□□ 1.39
SMARCC2-201ENST00000267064 TRIM27P14373 513 aa23.73■■□□□ 1.39
SMARCC2-201ENST00000267064 IGHDP01880 384 aa23.73■■□□□ 1.39
SMARCC2-201ENST00000267064 CD163L1Q9NR16 1453 aa23.73■■□□□ 1.39
SMARCC2-201ENST00000267064 TMEM57Q8N5G2 664 aa23.72■■□□□ 1.39
SMARCC2-201ENST00000267064 TTC21AQ8NDW8 1320 aa23.72■■□□□ 1.39
SMARCC2-201ENST00000267064 KIF16BQ96L93 1317 aa23.72■■□□□ 1.39
SMARCC2-201ENST00000267064 DDX19BQ9UMR2 479 aa23.71■■□□□ 1.39
SMARCC2-201ENST00000267064 MVPQ14764 893 aaKnown RBP23.71■■□□□ 1.39
SMARCC2-201ENST00000267064 DDX17Q92841 729 aaKnown RBP23.7■■□□□ 1.39
SMARCC2-201ENST00000267064 EYA1Q99502 592 aa23.7■■□□□ 1.38
SMARCC2-201ENST00000267064 EIF2S2P20042 333 aaKnown RBP23.69■■□□□ 1.38
SMARCC2-201ENST00000267064 C8orf58Q8NAV2 365 aa23.69■■□□□ 1.38
SMARCC2-201ENST00000267064 STK31Q9BXU1 1019 aa23.68■■□□□ 1.38
SMARCC2-201ENST00000267064 NLRP2Q9NX02 1062 aa23.68■■□□□ 1.38
SMARCC2-201ENST00000267064 USP6P35125 1406 aa23.68■■□□□ 1.38
SMARCC2-201ENST00000267064 UPF2Q9HAU5 1272 aaKnown RBP23.67■■□□□ 1.38
SMARCC2-201ENST00000267064 CPSF1Q10570 1443 aaKnown RBP23.67■■□□□ 1.38
SMARCC2-201ENST00000267064 KRT28Q7Z3Y7 464 aa23.67■■□□□ 1.38
SMARCC2-201ENST00000267064 A0A0G2JS52 829 aa23.67■■□□□ 1.38
SMARCC2-201ENST00000267064 IFT57Q9NWB7 429 aa23.67■■□□□ 1.38
SMARCC2-201ENST00000267064 PCDHB15Q9Y5E8 787 aa23.67■■□□□ 1.38
SMARCC2-201ENST00000267064 DLC1Q96QB1 1528 aa23.67■■□□□ 1.38
SMARCC2-201ENST00000267064 GAS2L2Q8NHY3 880 aa23.66■■□□□ 1.38
SMARCC2-201ENST00000267064 CPS1P31327 1500 aa23.66■■□□□ 1.38
SMARCC2-201ENST00000267064 MTHFSDQ2M296 383 aaKnown RBP23.66■■□□□ 1.38
SMARCC2-201ENST00000267064 CFAP44Q96MT7 982 aa23.65■■□□□ 1.38
SMARCC2-201ENST00000267064 CT47B1P0C2W7 299 aaPredicted RBP23.65■■□□□ 1.38
SMARCC2-201ENST00000267064 NOP58Q9Y2X3 529 aaKnown RBP23.65■■□□□ 1.38
SMARCC2-201ENST00000267064 LRRC59Q96AG4 307 aaKnown RBP23.64■■□□□ 1.38
SMARCC2-201ENST00000267064 TEFQ10587 303 aa23.64■■□□□ 1.38
SMARCC2-201ENST00000267064 CABLES1Q8TDN4 633 aa23.63■■□□□ 1.37
SMARCC2-201ENST00000267064 IL16Q14005 1332 aa23.63■■□□□ 1.37
SMARCC2-201ENST00000267064 SLC4A2P04920 1241 aa23.63■■□□□ 1.37
SMARCC2-201ENST00000267064 PDZRN3Q9UPQ7 1066 aa23.63■■□□□ 1.37
SMARCC2-201ENST00000267064 HOXC9P31274 260 aa23.62■■□□□ 1.37
SMARCC2-201ENST00000267064 FLT4P35916 1363 aa23.62■■□□□ 1.37
SMARCC2-201ENST00000267064 SLC4A3P48751 1232 aa23.61■■□□□ 1.37
SMARCC2-201ENST00000267064 FAM161AQ3B820 660 aa23.61■■□□□ 1.37
SMARCC2-201ENST00000267064 C1orf141Q5JVX7 400 aa23.61■■□□□ 1.37
SMARCC2-201ENST00000267064 PHF23Q9BUL5 403 aaPredicted RBP23.61■■□□□ 1.37
SMARCC2-201ENST00000267064 LNPKQ9C0E8 428 aa23.61■■□□□ 1.37
SMARCC2-201ENST00000267064 ANKRD45Q5TZF3 282 aa23.6■■□□□ 1.37
SMARCC2-201ENST00000267064 BACH2Q9BYV9 841 aa23.6■■□□□ 1.37
SMARCC2-201ENST00000267064 VAMP4O75379 141 aa23.6■■□□□ 1.37
SMARCC2-201ENST00000267064 RTL5Q5HYW3 569 aaPredicted RBP23.6■■□□□ 1.37
SMARCC2-201ENST00000267064 API5Q9BZZ5 524 aaKnown RBP23.59■■□□□ 1.37
SMARCC2-201ENST00000267064 TECPR2O15040 1411 aa23.59■■□□□ 1.37
SMARCC2-201ENST00000267064 ZNF530Q6P9A1 599 aaPredicted RBP23.59■■□□□ 1.37
SMARCC2-201ENST00000267064 ANP32EQ9BTT0 268 aa23.59■■□□□ 1.37
SMARCC2-201ENST00000267064 AATKQ6ZMQ8 1374 aa23.59■■□□□ 1.37
SMARCC2-201ENST00000267064 CHMP4BQ9H444 224 aaKnown RBP23.59■■□□□ 1.37
SMARCC2-201ENST00000267064 C19orf44Q9H6X5 657 aa23.59■■□□□ 1.37
SMARCC2-201ENST00000267064 PNPLA6Q8IY17 1366 aa23.58■■□□□ 1.37
SMARCC2-201ENST00000267064 FKBP5Q13451 457 aaPredicted RBP23.58■■□□□ 1.37
SMARCC2-201ENST00000267064 KCNH5Q8NCM2 988 aa23.58■■□□□ 1.37
SMARCC2-201ENST00000267064 GNAT3A8MTJ3 354 aa23.58■■□□□ 1.37
SMARCC2-201ENST00000267064 IPO9Q96P70 1041 aaKnown RBP23.58■■□□□ 1.36
SMARCC2-201ENST00000267064 CHRNA2Q15822 529 aa23.57■■□□□ 1.36
SMARCC2-201ENST00000267064 NPHP4O75161 1426 aaPredicted RBP23.57■■□□□ 1.36
SMARCC2-201ENST00000267064 FER1L4A9Z1Z3 1794 aa23.57■■□□□ 1.36
SMARCC2-201ENST00000267064 MSH5O43196 834 aa23.57■■□□□ 1.36
SMARCC2-201ENST00000267064 GCP02774 474 aa23.57■■□□□ 1.36
SMARCC2-201ENST00000267064 ZNF428Q96B54 188 aa23.57■■□□□ 1.36
SMARCC2-201ENST00000267064 RIMS1Q86UR5 1692 aaKnown RBP23.55■■□□□ 1.36
SMARCC2-201ENST00000267064 MPRIPQ6WCQ1 1025 aa23.55■■□□□ 1.36
SMARCC2-201ENST00000267064 UBR1Q8IWV7 1749 aa23.55■■□□□ 1.36
SMARCC2-201ENST00000267064 ALDH1L2Q3SY69 923 aa23.54■■□□□ 1.36
SMARCC2-201ENST00000267064 RAPGEF4Q8WZA2 1011 aa23.54■■□□□ 1.36
SMARCC2-201ENST00000267064 SBNO1A3KN83 1393 aa23.54■■□□□ 1.36
SMARCC2-201ENST00000267064 USP35Q9P2H5 1018 aa23.54■■□□□ 1.36
SMARCC2-201ENST00000267064 F6X3S4 739 aa23.53■■□□□ 1.36
SMARCC2-201ENST00000267064 MED14O60244 1454 aa23.53■■□□□ 1.36
SMARCC2-201ENST00000267064 ARXQ96QS3 562 aa23.52■■□□□ 1.36
SMARCC2-201ENST00000267064 C3P01024 1663 aa23.51■■□□□ 1.35
SMARCC2-201ENST00000267064 ANKRD24Q8TF21 1146 aa23.51■■□□□ 1.35
SMARCC2-201ENST00000267064 MFAP1P55081 439 aaKnown RBP23.5■■□□□ 1.35
SMARCC2-201ENST00000267064 PLEKHO1Q53GL0 409 aaPredicted RBP23.5■■□□□ 1.35
SMARCC2-201ENST00000267064 MRPL50Q8N5N7 158 aaKnown RBP23.5■■□□□ 1.35
SMARCC2-201ENST00000267064 NBPF6Q5VWK0 638 aa23.5■■□□□ 1.35
SMARCC2-201ENST00000267064 NBPF4Q96M43 638 aa23.5■■□□□ 1.35
SMARCC2-201ENST00000267064 CDC42BPGQ6DT37 1551 aa23.5■■□□□ 1.35
SMARCC2-201ENST00000267064 KDM2BQ8NHM5 1336 aa23.5■■□□□ 1.35
SMARCC2-201ENST00000267064 CDK12Q9NYV4 1490 aaPredicted RBP23.49■■□□□ 1.35
SMARCC2-201ENST00000267064 DDRGK1Q96HY6 314 aa23.49■■□□□ 1.35
SMARCC2-201ENST00000267064 CEP170BQ9Y4F5 1589 aaPredicted RBP23.48■■□□□ 1.35
SMARCC2-201ENST00000267064 NRXN3Q9Y4C0 1643 aa23.48■■□□□ 1.35
SMARCC2-201ENST00000267064 HDGFL1Q5TGJ6 251 aa23.48■■□□□ 1.35
SMARCC2-201ENST00000267064 LRRC7Q96NW7 1537 aa23.48■■□□□ 1.35
SMARCC2-201ENST00000267064 CADPS2Q86UW7 1296 aa23.47■■□□□ 1.35
SMARCC2-201ENST00000267064 IP6K1Q92551 441 aa23.47■■□□□ 1.35
SMARCC2-201ENST00000267064 PIK3R4Q99570 1358 aa23.47■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 82.2 ms