RNA–Protein interactions for RNA: ENST00000261875.9

HACD3-201, Transcript of 3-hydroxyacyl-CoA dehydratase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HACD3, Length 3,228 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HACD3-201ENST00000261875 CPSF1Q10570 1443 aaKnown RBP16.82■□□□□ 0.28
HACD3-201ENST00000261875 CCDC27Q2M243 656 aa16.82■□□□□ 0.28
HACD3-201ENST00000261875 MAP3K19Q56UN5 1328 aa16.82■□□□□ 0.28
HACD3-201ENST00000261875 C8orf58Q8NAV2 365 aa16.81■□□□□ 0.28
HACD3-201ENST00000261875 SETD1AO15047 1707 aaKnown RBP16.81■□□□□ 0.28
HACD3-201ENST00000261875 USP32Q8NFA0 1604 aa16.81■□□□□ 0.28
HACD3-201ENST00000261875 APBB1O00213 710 aa16.81■□□□□ 0.28
HACD3-201ENST00000261875 MVPQ14764 893 aaKnown RBP16.8■□□□□ 0.28
HACD3-201ENST00000261875 PNNQ9H307 717 aaKnown RBP16.8■□□□□ 0.28
HACD3-201ENST00000261875 KIF20BQ96Q89 1820 aa16.8■□□□□ 0.28
HACD3-201ENST00000261875 ATF7IPQ6VMQ6 1270 aa16.79■□□□□ 0.28
HACD3-201ENST00000261875 PDZRN3Q9UPQ7 1066 aa16.79■□□□□ 0.28
HACD3-201ENST00000261875 SIPA1L2Q9P2F8 1722 aaPredicted RBP16.79■□□□□ 0.28
HACD3-201ENST00000261875 C3P01024 1663 aa16.78■□□□□ 0.28
HACD3-201ENST00000261875 ANKLE2Q86XL3 938 aa16.78■□□□□ 0.28
HACD3-201ENST00000261875 ZNF428Q96B54 188 aa16.78■□□□□ 0.28
HACD3-201ENST00000261875 TWISTNBQ3B726 338 aaPredicted RBP16.78■□□□□ 0.28
HACD3-201ENST00000261875 TBX22Q9Y458 520 aa16.78■□□□□ 0.28
HACD3-201ENST00000261875 DLC1Q96QB1 1528 aa16.78■□□□□ 0.28
HACD3-201ENST00000261875 FER1L4A9Z1Z3 1794 aa16.77■□□□□ 0.28
HACD3-201ENST00000261875 PNPLA6Q8IY17 1366 aa16.77■□□□□ 0.28
HACD3-201ENST00000261875 DDX17Q92841 729 aaKnown RBP16.77■□□□□ 0.28
HACD3-201ENST00000261875 FAM135BQ49AJ0 1406 aa16.77■□□□□ 0.27
HACD3-201ENST00000261875 SEC24BO95487 1268 aa16.77■□□□□ 0.27
HACD3-201ENST00000261875 ORAI2Q96SN7 254 aa16.76■□□□□ 0.27
HACD3-201ENST00000261875 FAM161AQ3B820 660 aa16.75■□□□□ 0.27
HACD3-201ENST00000261875 C8orf34Q49A92 452 aa16.75■□□□□ 0.27
HACD3-201ENST00000261875 DAXXQ9UER7 740 aaPredicted RBP16.75■□□□□ 0.27
HACD3-201ENST00000261875 USP6P35125 1406 aa16.75■□□□□ 0.27
HACD3-201ENST00000261875 PSME1Q06323 249 aa16.75■□□□□ 0.27
HACD3-201ENST00000261875 MS4A1P11836 297 aa16.74■□□□□ 0.27
HACD3-201ENST00000261875 HSPA2P54652 639 aa16.74■□□□□ 0.27
HACD3-201ENST00000261875 LNPKQ9C0E8 428 aa16.74■□□□□ 0.27
HACD3-201ENST00000261875 CDC42BPGQ6DT37 1551 aa16.74■□□□□ 0.27
HACD3-201ENST00000261875 RGPD8O14715 1765 aaPredicted RBP16.74■□□□□ 0.27
HACD3-201ENST00000261875 GNAI1P63096 354 aa16.74■□□□□ 0.27
HACD3-201ENST00000261875 SLC4A10Q6U841 1118 aa16.74■□□□□ 0.27
HACD3-201ENST00000261875 PLEKHG3A1L390 1219 aa16.73■□□□□ 0.27
HACD3-201ENST00000261875 EYA1Q99502 592 aa16.73■□□□□ 0.27
HACD3-201ENST00000261875 VAMP4O75379 141 aa16.73■□□□□ 0.27
HACD3-201ENST00000261875 MTHFSDQ2M296 383 aaKnown RBP16.72■□□□□ 0.27
HACD3-201ENST00000261875 SPRYD3Q8NCJ5 442 aa16.72■□□□□ 0.27
HACD3-201ENST00000261875 RTF1Q92541 710 aaKnown RBP16.72■□□□□ 0.27
HACD3-201ENST00000261875 RWDD1Q9H446 243 aaPredicted RBP16.72■□□□□ 0.27
HACD3-201ENST00000261875 PHF8Q9UPP1 1060 aa16.72■□□□□ 0.27
HACD3-201ENST00000261875 RIMS1Q86UR5 1692 aaKnown RBP16.71■□□□□ 0.27
HACD3-201ENST00000261875 TECPR2O15040 1411 aa16.71■□□□□ 0.27
HACD3-201ENST00000261875 LRRC59Q96AG4 307 aaKnown RBP16.71■□□□□ 0.27
HACD3-201ENST00000261875 MED14O60244 1454 aa16.7■□□□□ 0.26
HACD3-201ENST00000261875 ADGRB2O60241 1585 aa16.7■□□□□ 0.26
HACD3-201ENST00000261875 IPO8O15397 1037 aaKnown RBP16.7■□□□□ 0.26
HACD3-201ENST00000261875 TSPYL4Q9UJ04 414 aa16.7■□□□□ 0.26
HACD3-201ENST00000261875 DDX19BQ9UMR2 479 aa16.7■□□□□ 0.26
HACD3-201ENST00000261875 F6X3S4 739 aa16.69■□□□□ 0.26
HACD3-201ENST00000261875 ANKRD26Q9UPS8 1709 aa16.69■□□□□ 0.26
HACD3-201ENST00000261875 PROSER2Q86WR7 435 aaPredicted RBP16.69■□□□□ 0.26
HACD3-201ENST00000261875 KIF16BQ96L93 1317 aa16.69■□□□□ 0.26
HACD3-201ENST00000261875 ITSN1Q15811 1721 aa16.69■□□□□ 0.26
HACD3-201ENST00000261875 SIRT1Q96EB6 747 aa16.68■□□□□ 0.26
HACD3-201ENST00000261875 CFAP44Q96MT7 982 aa16.68■□□□□ 0.26
HACD3-201ENST00000261875 ZC3H6P61129 1189 aaKnown RBP16.68■□□□□ 0.26
HACD3-201ENST00000261875 CDK12Q9NYV4 1490 aaPredicted RBP16.67■□□□□ 0.26
HACD3-201ENST00000261875 IFT57Q9NWB7 429 aa16.67■□□□□ 0.26
HACD3-201ENST00000261875 MFAP1P55081 439 aaKnown RBP16.67■□□□□ 0.26
HACD3-201ENST00000261875 LMOD3Q0VAK6 560 aa16.66■□□□□ 0.26
HACD3-201ENST00000261875 ANKRD45Q5TZF3 282 aa16.66■□□□□ 0.26
HACD3-201ENST00000261875 MRPL50Q8N5N7 158 aaKnown RBP16.66■□□□□ 0.26
HACD3-201ENST00000261875 CALD1Q05682 793 aaKnown RBP16.65■□□□□ 0.26
HACD3-201ENST00000261875 DIP2AQ14689 1571 aa16.65■□□□□ 0.26
HACD3-201ENST00000261875 IL16Q14005 1332 aa16.65■□□□□ 0.26
HACD3-201ENST00000261875 AATKQ6ZMQ8 1374 aa16.65■□□□□ 0.26
HACD3-201ENST00000261875 HOXC9P31274 260 aa16.65■□□□□ 0.26
HACD3-201ENST00000261875 OVOS2A0A0J9YW53 1432 aa16.65■□□□□ 0.26
HACD3-201ENST00000261875 OVOS2Q6IE36 1432 aa16.65■□□□□ 0.26
HACD3-201ENST00000261875 SLC4A2P04920 1241 aa16.64■□□□□ 0.26
HACD3-201ENST00000261875 CABLES1Q8TDN4 633 aa16.64■□□□□ 0.26
HACD3-201ENST00000261875 EIF2S2P20042 333 aaKnown RBP16.64■□□□□ 0.25
HACD3-201ENST00000261875 G2E3Q7L622 706 aa16.64■□□□□ 0.25
HACD3-201ENST00000261875 SLKQ9H2G2 1235 aaPredicted RBP16.64■□□□□ 0.25
HACD3-201ENST00000261875 RTL5Q5HYW3 569 aaPredicted RBP16.63■□□□□ 0.25
HACD3-201ENST00000261875 FLT4P35916 1363 aa16.63■□□□□ 0.25
HACD3-201ENST00000261875 ANXA1P04083 346 aa16.62■□□□□ 0.25
HACD3-201ENST00000261875 ZBTB40Q9NUA8 1239 aa16.62■□□□□ 0.25
HACD3-201ENST00000261875 CEP170BQ9Y4F5 1589 aaPredicted RBP16.62■□□□□ 0.25
HACD3-201ENST00000261875 MON2Q7Z3U7 1717 aa16.61■□□□□ 0.25
HACD3-201ENST00000261875 CT47B1P0C2W7 299 aaPredicted RBP16.6■□□□□ 0.25
HACD3-201ENST00000261875 TTC21AQ8NDW8 1320 aa16.6■□□□□ 0.25
HACD3-201ENST00000261875 DLG5Q8TDM6 1919 aa16.6■□□□□ 0.25
HACD3-201ENST00000261875 ARHGAP23Q9P227 1491 aa16.6■□□□□ 0.25
HACD3-201ENST00000261875 ZNF853P0CG23 659 aa16.6■□□□□ 0.25
HACD3-201ENST00000261875 NBPF6Q5VWK0 638 aa16.6■□□□□ 0.25
HACD3-201ENST00000261875 NBPF4Q96M43 638 aa16.6■□□□□ 0.25
HACD3-201ENST00000261875 MPRIPQ6WCQ1 1025 aa16.59■□□□□ 0.25
HACD3-201ENST00000261875 PEAK1Q9H792 1746 aa16.59■□□□□ 0.25
HACD3-201ENST00000261875 ALDH1L2Q3SY69 923 aa16.59■□□□□ 0.25
HACD3-201ENST00000261875 SLIT1O75093 1534 aa16.59■□□□□ 0.25
HACD3-201ENST00000261875 KNDC1Q76NI1 1749 aa16.59■□□□□ 0.25
HACD3-201ENST00000261875 AKAP12Q02952 1782 aa16.58■□□□□ 0.24
HACD3-201ENST00000261875 SBNO1A3KN83 1393 aa16.58■□□□□ 0.24
HACD3-201ENST00000261875 SMARCA5O60264 1052 aaPredicted RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms