RNA–Protein interactions for RNA: ENST00000258243.6

URB2-201, Transcript of URB2 ribosome biogenesis 2 homolog (S. cerevisiae), humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene URB2, Length 5,613 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
URB2-201ENST00000258243 NSD3Q9BZ95 1437 aa13.09□□□□□ -0.31
URB2-201ENST00000258243 GNAT3A8MTJ3 354 aa13.09□□□□□ -0.31
URB2-201ENST00000258243 CCDC47Q96A33 483 aaKnown RBP13.08□□□□□ -0.32
URB2-201ENST00000258243 RAPGEF6Q8TEU7 1601 aa13.08□□□□□ -0.32
URB2-201ENST00000258243 ZPR1O75312 459 aa13.08□□□□□ -0.32
URB2-201ENST00000258243 MTERF4Q7Z6M4 381 aaKnown RBP13.08□□□□□ -0.32
URB2-201ENST00000258243 FSD1Q9BTV5 496 aa13.08□□□□□ -0.32
URB2-201ENST00000258243 PLCH2O75038 1416 aa13.08□□□□□ -0.32
URB2-201ENST00000258243 CNTROBQ8N137 903 aa13.08□□□□□ -0.32
URB2-201ENST00000258243 CEP89Q96ST8 783 aa13.08□□□□□ -0.32
URB2-201ENST00000258243 DNAJC2Q99543 621 aaKnown RBP13.08□□□□□ -0.32
URB2-201ENST00000258243 NAIPQ13075 1403 aa13.07□□□□□ -0.32
URB2-201ENST00000258243 CDR1P51861 262 aa13.07□□□□□ -0.32
URB2-201ENST00000258243 EXOC5O00471 708 aa13.07□□□□□ -0.32
URB2-201ENST00000258243 GNAI2P04899 355 aa13.07□□□□□ -0.32
URB2-201ENST00000258243 TPM2P07951 284 aa13.07□□□□□ -0.32
URB2-201ENST00000258243 CCT4P50991 539 aaKnown RBP13.07□□□□□ -0.32
URB2-201ENST00000258243 CCDC57Q2TAC2 916 aa13.07□□□□□ -0.32
URB2-201ENST00000258243 AMOTQ4VCS5 1084 aa13.07□□□□□ -0.32
URB2-201ENST00000258243 FCHSD2O94868 740 aa13.07□□□□□ -0.32
URB2-201ENST00000258243 SRCIN1Q9C0H9 1055 aa13.06□□□□□ -0.32
URB2-201ENST00000258243 KDM5BQ9UGL1 1544 aa13.06□□□□□ -0.32
URB2-201ENST00000258243 RBM5P52756 815 aaKnown RBP eCLIP13.06□□□□□ -0.32
URB2-201ENST00000258243 PES1O00541 588 aaKnown RBP13.06□□□□□ -0.32
URB2-201ENST00000258243 SART3Q15020 963 aaKnown RBP13.06□□□□□ -0.32
URB2-201ENST00000258243 SAFBQ15424 915 aaKnown RBP eCLIP13.06□□□□□ -0.32
URB2-201ENST00000258243 PDZRN4Q6ZMN7 1036 aaPredicted RBP13.06□□□□□ -0.32
URB2-201ENST00000258243 PANK1Q8TE04 598 aa13.05□□□□□ -0.32
URB2-201ENST00000258243 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.05□□□□□ -0.32
URB2-201ENST00000258243 ZNF518AQ6AHZ1 1483 aa13.05□□□□□ -0.32
URB2-201ENST00000258243 NOS1P29475 1434 aa13.05□□□□□ -0.32
URB2-201ENST00000258243 HMGB1P09429 215 aaKnown RBP13.05□□□□□ -0.32
URB2-201ENST00000258243 MRE11P49959 708 aa13.05□□□□□ -0.32
URB2-201ENST00000258243 LNPKQ9C0E8 428 aa13.05□□□□□ -0.32
URB2-201ENST00000258243 ADGRF5Q8IZF2 1346 aa13.05□□□□□ -0.32
URB2-201ENST00000258243 UHRF1BP1LA0JNW5 1464 aa13.04□□□□□ -0.32
URB2-201ENST00000258243 PDE4CQ08493 712 aa13.04□□□□□ -0.32
URB2-201ENST00000258243 MTMR7Q9Y216 660 aa13.04□□□□□ -0.32
URB2-201ENST00000258243 BACH2Q9BYV9 841 aa13.04□□□□□ -0.32
URB2-201ENST00000258243 BRMS1Q9HCU9 246 aa13.04□□□□□ -0.32
URB2-201ENST00000258243 HIP1O00291 1037 aa13.04□□□□□ -0.32
URB2-201ENST00000258243 DCTN1Q14203 1278 aa13.04□□□□□ -0.32
URB2-201ENST00000258243 NCOA1Q15788 1441 aa13.04□□□□□ -0.32
URB2-201ENST00000258243 IGHMBP2P38935 993 aaKnown RBP13.04□□□□□ -0.32
URB2-201ENST00000258243 ATP10BO94823 1461 aa13.03□□□□□ -0.32
URB2-201ENST00000258243 HSP90AB3PQ58FF7 597 aa13.03□□□□□ -0.32
URB2-201ENST00000258243 MAP3K1Q13233 1512 aa13.03□□□□□ -0.32
URB2-201ENST00000258243 A2MP01023 1474 aa13.03□□□□□ -0.32
URB2-201ENST00000258243 NME9Q86XW9 330 aa13.03□□□□□ -0.32
URB2-201ENST00000258243 DYDC1Q8WWB3 177 aa13.03□□□□□ -0.32
URB2-201ENST00000258243 TSR2Q969E8 191 aaKnown RBP13.03□□□□□ -0.32
URB2-201ENST00000258243 ACBD3Q9H3P7 528 aa13.03□□□□□ -0.32
URB2-201ENST00000258243 H0YHG0 523 aa13.03□□□□□ -0.32
URB2-201ENST00000258243 XBP1P17861 261 aa13.02□□□□□ -0.32
URB2-201ENST00000258243 WDR63Q8IWG1 891 aa13.02□□□□□ -0.32
URB2-201ENST00000258243 PTCD1O75127 700 aaKnown RBP13.02□□□□□ -0.32
URB2-201ENST00000258243 NFE2L2Q16236 605 aa13.02□□□□□ -0.32
URB2-201ENST00000258243 FOXD4L6Q3SYB3 417 aaPredicted RBP13.02□□□□□ -0.32
URB2-201ENST00000258243 FOXD4L3Q6VB84 417 aaPredicted RBP13.02□□□□□ -0.32
URB2-201ENST00000258243 MPRIPQ6WCQ1 1025 aa13.02□□□□□ -0.32
URB2-201ENST00000258243 THOC2Q8NI27 1593 aaKnown RBP13.02□□□□□ -0.33
URB2-201ENST00000258243 CDCA7LQ96GN5 454 aa13.02□□□□□ -0.33
URB2-201ENST00000258243 C22orf23Q9BZE7 217 aa13.02□□□□□ -0.33
URB2-201ENST00000258243 NOB1Q9ULX3 412 aaKnown RBP13.02□□□□□ -0.33
URB2-201ENST00000258243 PSMA5P28066 241 aa13.01□□□□□ -0.33
URB2-201ENST00000258243 USHBP1Q8N6Y0 703 aa13.01□□□□□ -0.33
URB2-201ENST00000258243 CT47B1P0C2W7 299 aaPredicted RBP13.01□□□□□ -0.33
URB2-201ENST00000258243 TSR1Q2NL82 804 aaKnown RBP13.01□□□□□ -0.33
URB2-201ENST00000258243 TAF3Q5VWG9 929 aa13.01□□□□□ -0.33
URB2-201ENST00000258243 CNKSR2Q8WXI2 1034 aa13□□□□□ -0.33
URB2-201ENST00000258243 HOOK1Q9UJC3 728 aaKnown RBP13□□□□□ -0.33
URB2-201ENST00000258243 PLCD4Q9BRC7 762 aa13□□□□□ -0.33
URB2-201ENST00000258243 SIL1Q9H173 461 aa13□□□□□ -0.33
URB2-201ENST00000258243 GPATCH8Q9UKJ3 1502 aaKnown RBP13□□□□□ -0.33
URB2-201ENST00000258243 CDC45O75419 566 aa13□□□□□ -0.33
URB2-201ENST00000258243 ADAMTS12P58397 1594 aa13□□□□□ -0.33
URB2-201ENST00000258243 NPHP3Q7Z494 1330 aa13□□□□□ -0.33
URB2-201ENST00000258243 TRAK2O60296 914 aa13□□□□□ -0.33
URB2-201ENST00000258243 ZSCAN25Q6NSZ9 544 aa13□□□□□ -0.33
URB2-201ENST00000258243 AK7Q96M32 723 aa13□□□□□ -0.33
URB2-201ENST00000258243 NACAP1Q9BZK3 213 aa13□□□□□ -0.33
URB2-201ENST00000258243 C14orf93Q9H972 538 aaKnown RBP13□□□□□ -0.33
URB2-201ENST00000258243 DUOX2Q9NRD8 1548 aa12.99□□□□□ -0.33
URB2-201ENST00000258243 ZRSR2Q15696 482 aaKnown RBP12.99□□□□□ -0.33
URB2-201ENST00000258243 ATP2B2Q01814 1243 aa12.99□□□□□ -0.33
URB2-201ENST00000258243 ZNF428Q96B54 188 aa12.99□□□□□ -0.33
URB2-201ENST00000258243 BCL11BQ9C0K0 894 aaPredicted RBP12.99□□□□□ -0.33
URB2-201ENST00000258243 TMOD2Q9NZR1 351 aa12.99□□□□□ -0.33
URB2-201ENST00000258243 SMC3Q9UQE7 1217 aa12.99□□□□□ -0.33
URB2-201ENST00000258243 CCDC184Q52MB2 194 aa12.98□□□□□ -0.33
URB2-201ENST00000258243 INCENPQ9NQS7 918 aa12.98□□□□□ -0.33
URB2-201ENST00000258243 R3HCC1Q9Y3T6 440 aaKnown RBP12.98□□□□□ -0.33
URB2-201ENST00000258243 USP8P40818 1118 aa12.98□□□□□ -0.33
URB2-201ENST00000258243 KIF21AQ7Z4S6 1674 aa12.98□□□□□ -0.33
URB2-201ENST00000258243 CEP126Q9P2H0 1117 aa12.98□□□□□ -0.33
URB2-201ENST00000258243 ZSCAN29Q8IWY8 852 aaPredicted RBP12.97□□□□□ -0.33
URB2-201ENST00000258243 RIMS2Q9UQ26 1411 aa12.97□□□□□ -0.33
URB2-201ENST00000258243 NASPP49321 788 aaPredicted RBP12.97□□□□□ -0.33
URB2-201ENST00000258243 EIF4G3O43432 1585 aaKnown RBP12.97□□□□□ -0.33
URB2-201ENST00000258243 TPM1P09493 284 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms