RNA–Protein interactions for RNA: ENST00000256474.2

VHL-201, Transcript of von Hippel-Lindau tumor suppressor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VHL, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VHL-201ENST00000256474 DDX49Q9Y6V7 483 aaKnown RBP16.75■□□□□ 0.27
VHL-201ENST00000256474 DDX11L8A8MPP1 907 aa16.75■□□□□ 0.27
VHL-201ENST00000256474 GAS2L2Q8NHY3 880 aa16.75■□□□□ 0.27
VHL-201ENST00000256474 CHAMP1Q96JM3 812 aa16.75■□□□□ 0.27
VHL-201ENST00000256474 SHPRHQ149N8 1683 aa16.75■□□□□ 0.27
VHL-201ENST00000256474 ABCA9Q8IUA7 1624 aa16.74■□□□□ 0.27
VHL-201ENST00000256474 MCTP1Q6DN14 999 aa16.74■□□□□ 0.27
VHL-201ENST00000256474 GCC1Q96CN9 775 aa16.74■□□□□ 0.27
VHL-201ENST00000256474 GRPEL1Q9HAV7 217 aa16.74■□□□□ 0.27
VHL-201ENST00000256474 NRXN1Q9ULB1 1477 aa16.74■□□□□ 0.27
VHL-201ENST00000256474 ABCC3O15438 1527 aa16.74■□□□□ 0.27
VHL-201ENST00000256474 FOXO3O43524 673 aa16.73■□□□□ 0.27
VHL-201ENST00000256474 SLC4A2P04920 1241 aa16.73■□□□□ 0.27
VHL-201ENST00000256474 HSP90AB2PQ58FF8 381 aa16.73■□□□□ 0.27
VHL-201ENST00000256474 BMP2KLQ5H9B9 411 aa16.73■□□□□ 0.27
VHL-201ENST00000256474 API5Q9BZZ5 524 aaKnown RBP16.73■□□□□ 0.27
VHL-201ENST00000256474 IL16Q14005 1332 aa16.73■□□□□ 0.27
VHL-201ENST00000256474 CDC45O75419 566 aa16.73■□□□□ 0.27
VHL-201ENST00000256474 SLC26A8Q96RN1 970 aa16.73■□□□□ 0.27
VHL-201ENST00000256474 GOLGA6L22H0YM25 854 aa16.73■□□□□ 0.27
VHL-201ENST00000256474 K7ELQ4 463 aaPredicted RBP16.72■□□□□ 0.27
VHL-201ENST00000256474 WASLO00401 505 aaPredicted RBP16.72■□□□□ 0.27
VHL-201ENST00000256474 MEIS3Q99687 375 aa16.72■□□□□ 0.27
VHL-201ENST00000256474 PPIP5K1Q6PFW1 1433 aa16.72■□□□□ 0.27
VHL-201ENST00000256474 IL13P35225 146 aa16.72■□□□□ 0.27
VHL-201ENST00000256474 CHMP4BQ9H444 224 aaKnown RBP16.71■□□□□ 0.27
VHL-201ENST00000256474 IFT57Q9NWB7 429 aa16.71■□□□□ 0.27
VHL-201ENST00000256474 ARAP3Q8WWN8 1544 aa16.71■□□□□ 0.27
VHL-201ENST00000256474 KIAA1210Q9ULL0 1709 aa16.71■□□□□ 0.27
VHL-201ENST00000256474 CFAP44Q96MT7 982 aa16.71■□□□□ 0.27
VHL-201ENST00000256474 EXOC6BQ9Y2D4 811 aa16.71■□□□□ 0.27
VHL-201ENST00000256474 GSPT1P15170 499 aaKnown RBP16.7■□□□□ 0.26
VHL-201ENST00000256474 RTF1Q92541 710 aaKnown RBP16.7■□□□□ 0.26
VHL-201ENST00000256474 RILPL2Q969X0 211 aa16.7■□□□□ 0.26
VHL-201ENST00000256474 TRIM6-TRIM34B2RNG4 842 aa16.7■□□□□ 0.26
VHL-201ENST00000256474 LMOD3Q0VAK6 560 aa16.7■□□□□ 0.26
VHL-201ENST00000256474 GAS2L3Q86XJ1 694 aa16.7■□□□□ 0.26
VHL-201ENST00000256474 CCDC61Q9Y6R9 512 aa16.7■□□□□ 0.26
VHL-201ENST00000256474 PUS7Q96PZ0 661 aaKnown RBP16.69■□□□□ 0.26
VHL-201ENST00000256474 ABCF1Q8NE71 845 aaKnown RBP eCLIP16.69■□□□□ 0.26
VHL-201ENST00000256474 MRE11P49959 708 aa16.69■□□□□ 0.26
VHL-201ENST00000256474 CAMSAP1Q5T5Y3 1602 aa16.69■□□□□ 0.26
VHL-201ENST00000256474 TSPYL4Q9UJ04 414 aa16.68■□□□□ 0.26
VHL-201ENST00000256474 DTNBO60941 627 aa16.68■□□□□ 0.26
VHL-201ENST00000256474 PKP1Q13835 747 aa16.68■□□□□ 0.26
VHL-201ENST00000256474 CAVIN1Q6NZI2 390 aaKnown RBP16.68■□□□□ 0.26
VHL-201ENST00000256474 RBM25P49756 843 aaKnown RBP16.68■□□□□ 0.26
VHL-201ENST00000256474 PLEKHM2Q8IWE5 1019 aa16.68■□□□□ 0.26
VHL-201ENST00000256474 ANP32BQ92688 251 aaKnown RBP16.68■□□□□ 0.26
VHL-201ENST00000256474 CASC1Q6TDU7 716 aa16.67■□□□□ 0.26
VHL-201ENST00000256474 FRMPD1Q5SYB0 1578 aa16.67■□□□□ 0.26
VHL-201ENST00000256474 EIF4A2Q14240 407 aaKnown RBP16.67■□□□□ 0.26
VHL-201ENST00000256474 SETBP1Q9Y6X0 1596 aa16.67■□□□□ 0.26
VHL-201ENST00000256474 AMPHP49418 695 aa16.67■□□□□ 0.26
VHL-201ENST00000256474 G2E3Q7L622 706 aa16.67■□□□□ 0.26
VHL-201ENST00000256474 MLH3Q9UHC1 1453 aa16.66■□□□□ 0.26
VHL-201ENST00000256474 NGDNQ8NEJ9 315 aaKnown RBP16.66■□□□□ 0.26
VHL-201ENST00000256474 KIF2CQ99661 725 aa16.66■□□□□ 0.26
VHL-201ENST00000256474 ZGPATQ8N5A5 531 aaKnown RBP16.66■□□□□ 0.26
VHL-201ENST00000256474 MAP4K4O95819 1239 aaPredicted RBP16.65■□□□□ 0.26
VHL-201ENST00000256474 FKBP5Q13451 457 aaPredicted RBP16.65■□□□□ 0.26
VHL-201ENST00000256474 SDSP20132 328 aa16.65■□□□□ 0.26
VHL-201ENST00000256474 RBM33Q96EV2 1170 aaKnown RBP16.65■□□□□ 0.26
VHL-201ENST00000256474 ZNF692Q9BU19 519 aaPredicted RBP16.65■□□□□ 0.26
VHL-201ENST00000256474 PRPF40AO75400 957 aaKnown RBP16.64■□□□□ 0.25
VHL-201ENST00000256474 CEBPAP49715 358 aaPredicted RBP16.64■□□□□ 0.25
VHL-201ENST00000256474 MPNDQ8N594 471 aa16.64■□□□□ 0.25
VHL-201ENST00000256474 NEXMIFQ5QGS0 1516 aa16.64■□□□□ 0.25
VHL-201ENST00000256474 INTS3Q68E01 1043 aaKnown RBP16.63■□□□□ 0.25
VHL-201ENST00000256474 HECW2Q9P2P5 1572 aa16.63■□□□□ 0.25
VHL-201ENST00000256474 PPLO60437 1756 aa16.63■□□□□ 0.25
VHL-201ENST00000256474 LRRC7Q96NW7 1537 aa16.63■□□□□ 0.25
VHL-201ENST00000256474 ARID3AQ99856 593 aa16.63■□□□□ 0.25
VHL-201ENST00000256474 EIF2S2P20042 333 aaKnown RBP16.62■□□□□ 0.25
VHL-201ENST00000256474 NEK4P51957 841 aa16.62■□□□□ 0.25
VHL-201ENST00000256474 RAB3GAP1Q15042 981 aa16.62■□□□□ 0.25
VHL-201ENST00000256474 TTC22Q5TAA0 569 aa16.62■□□□□ 0.25
VHL-201ENST00000256474 LARP6Q9BRS8 491 aaKnown RBP16.62■□□□□ 0.25
VHL-201ENST00000256474 ANO2Q9NQ90 1003 aa16.62■□□□□ 0.25
VHL-201ENST00000256474 RBM27Q9P2N5 1060 aaKnown RBP16.62■□□□□ 0.25
VHL-201ENST00000256474 LMTK2Q8IWU2 1503 aa16.62■□□□□ 0.25
VHL-201ENST00000256474 METP08581 1390 aa16.62■□□□□ 0.25
VHL-201ENST00000256474 IL1RAPL2Q9NP60 686 aa16.62■□□□□ 0.25
VHL-201ENST00000256474 PTPRMP28827 1452 aa16.62■□□□□ 0.25
VHL-201ENST00000256474 RNF214Q8ND24 703 aa16.61■□□□□ 0.25
VHL-201ENST00000256474 SNX21Q969T3 373 aa16.61■□□□□ 0.25
VHL-201ENST00000256474 STK31Q9BXU1 1019 aa16.61■□□□□ 0.25
VHL-201ENST00000256474 CD163L1Q9NR16 1453 aa16.61■□□□□ 0.25
VHL-201ENST00000256474 BAG4O95429 457 aaKnown RBP16.61■□□□□ 0.25
VHL-201ENST00000256474 ACEP12821 1306 aa16.61■□□□□ 0.25
VHL-201ENST00000256474 CEP85Q6P2H3 762 aa16.61■□□□□ 0.25
VHL-201ENST00000256474 USHBP1Q8N6Y0 703 aa16.61■□□□□ 0.25
VHL-201ENST00000256474 FSD2A1L4K1 749 aa16.6■□□□□ 0.25
VHL-201ENST00000256474 ARHGAP45Q92619 1136 aa16.6■□□□□ 0.25
VHL-201ENST00000256474 ABCC4O15439 1325 aa16.6■□□□□ 0.25
VHL-201ENST00000256474 MSH6P52701 1360 aa16.6■□□□□ 0.25
VHL-201ENST00000256474 ESPNB1AK53 854 aa16.6■□□□□ 0.25
VHL-201ENST00000256474 ST18O60284 1047 aa16.6■□□□□ 0.25
VHL-201ENST00000256474 NASPP49321 788 aaPredicted RBP16.6■□□□□ 0.25
VHL-201ENST00000256474 UPF3BQ9BZI7 483 aaKnown RBP16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms