RNA–Protein interactions for RNA: ENST00000253122.9

SLC6A8-201, Transcript of solute carrier family 6 member 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC6A8, Length 3,763 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC6A8-201ENST00000253122 RABEP1Q15276 862 aa19.47■□□□□ 0.71
SLC6A8-201ENST00000253122 SYCE3A1L190 88 aa19.47■□□□□ 0.71
SLC6A8-201ENST00000253122 RBM27Q9P2N5 1060 aaKnown RBP19.47■□□□□ 0.71
SLC6A8-201ENST00000253122 RAB3GAP1Q15042 981 aa19.46■□□□□ 0.71
SLC6A8-201ENST00000253122 MINK1Q8N4C8 1332 aaPredicted RBP19.46■□□□□ 0.71
SLC6A8-201ENST00000253122 ERBB4Q15303 1308 aa19.46■□□□□ 0.71
SLC6A8-201ENST00000253122 HDAC1Q13547 482 aaPredicted RBP19.46■□□□□ 0.71
SLC6A8-201ENST00000253122 INTS3Q68E01 1043 aaKnown RBP19.46■□□□□ 0.71
SLC6A8-201ENST00000253122 THUMPD2Q9BTF0 503 aaKnown RBP19.46■□□□□ 0.71
SLC6A8-201ENST00000253122 GCC1Q96CN9 775 aa19.46■□□□□ 0.71
SLC6A8-201ENST00000253122 ZC3H13Q5T200 1668 aaKnown RBP19.45■□□□□ 0.7
SLC6A8-201ENST00000253122 SMC5Q8IY18 1101 aa19.45■□□□□ 0.7
SLC6A8-201ENST00000253122 CCDC39Q9UFE4 941 aa19.45■□□□□ 0.7
SLC6A8-201ENST00000253122 CT47B1P0C2W7 299 aaPredicted RBP19.44■□□□□ 0.7
SLC6A8-201ENST00000253122 KLHL40Q2TBA0 621 aa19.44■□□□□ 0.7
SLC6A8-201ENST00000253122 C14orf93Q9H972 538 aaKnown RBP19.44■□□□□ 0.7
SLC6A8-201ENST00000253122 NEK4P51957 841 aa19.44■□□□□ 0.7
SLC6A8-201ENST00000253122 POLR1AO95602 1720 aaPredicted RBP19.44■□□□□ 0.7
SLC6A8-201ENST00000253122 REC8O95072 547 aa19.44■□□□□ 0.7
SLC6A8-201ENST00000253122 RILPL2Q969X0 211 aa19.44■□□□□ 0.7
SLC6A8-201ENST00000253122 ADGRB3O60242 1522 aa19.44■□□□□ 0.7
SLC6A8-201ENST00000253122 LAMC1P11047 1609 aa19.43■□□□□ 0.7
SLC6A8-201ENST00000253122 PRKAR2BP31323 418 aa19.43■□□□□ 0.7
SLC6A8-201ENST00000253122 SNX21Q969T3 373 aa19.43■□□□□ 0.7
SLC6A8-201ENST00000253122 HDGFP51858 240 aaKnown RBP19.43■□□□□ 0.7
SLC6A8-201ENST00000253122 BMP2KLQ5H9B9 411 aa19.43■□□□□ 0.7
SLC6A8-201ENST00000253122 DRC7Q8IY82 874 aa19.43■□□□□ 0.7
SLC6A8-201ENST00000253122 TAOK2Q9UL54 1235 aa19.43■□□□□ 0.7
SLC6A8-201ENST00000253122 NUCB1Q02818 461 aa19.42■□□□□ 0.7
SLC6A8-201ENST00000253122 AGLP35573 1532 aa19.42■□□□□ 0.7
SLC6A8-201ENST00000253122 KIF13AQ9H1H9 1805 aa19.42■□□□□ 0.7
SLC6A8-201ENST00000253122 NEURL4Q96JN8 1562 aa19.42■□□□□ 0.7
SLC6A8-201ENST00000253122 ZSCAN23Q3MJ62 389 aa19.41■□□□□ 0.7
SLC6A8-201ENST00000253122 ARHGEF40Q8TER5 1519 aa19.4■□□□□ 0.7
SLC6A8-201ENST00000253122 OFD1O75665 1012 aa19.4■□□□□ 0.7
SLC6A8-201ENST00000253122 ANO2Q9NQ90 1003 aa19.4■□□□□ 0.7
SLC6A8-201ENST00000253122 API5Q9BZZ5 524 aaKnown RBP19.39■□□□□ 0.7
SLC6A8-201ENST00000253122 PHF14O94880 888 aa19.39■□□□□ 0.69
SLC6A8-201ENST00000253122 PRIM1P49642 420 aaKnown RBP19.39■□□□□ 0.69
SLC6A8-201ENST00000253122 ERVK-7P63135 1459 aa19.38■□□□□ 0.69
SLC6A8-201ENST00000253122 POLR3AO14802 1390 aaPredicted RBP19.38■□□□□ 0.69
SLC6A8-201ENST00000253122 RBM25P49756 843 aaKnown RBP19.37■□□□□ 0.69
SLC6A8-201ENST00000253122 ZBTB40Q9NUA8 1239 aa19.37■□□□□ 0.69
SLC6A8-201ENST00000253122 ZHX1Q9UKY1 873 aaPredicted RBP19.37■□□□□ 0.69
SLC6A8-201ENST00000253122 HMMRO75330 724 aa19.37■□□□□ 0.69
SLC6A8-201ENST00000253122 MROH2AA6NES4 1674 aa19.37■□□□□ 0.69
SLC6A8-201ENST00000253122 CHMP3Q9Y3E7 222 aa19.37■□□□□ 0.69
SLC6A8-201ENST00000253122 ZMYM3Q14202 1370 aa19.36■□□□□ 0.69
SLC6A8-201ENST00000253122 MTERF4Q7Z6M4 381 aaKnown RBP19.36■□□□□ 0.69
SLC6A8-201ENST00000253122 REREQ9P2R6 1566 aa19.36■□□□□ 0.69
SLC6A8-201ENST00000253122 TSPY26PQ9H489 355 aa19.36■□□□□ 0.69
SLC6A8-201ENST00000253122 PODXL2Q9NZ53 605 aa19.36■□□□□ 0.69
SLC6A8-201ENST00000253122 TWISTNBQ3B726 338 aaPredicted RBP19.36■□□□□ 0.69
SLC6A8-201ENST00000253122 GOLGA6L4A6NEF3 574 aa19.35■□□□□ 0.69
SLC6A8-201ENST00000253122 CD2BP2O95400 341 aaKnown RBP19.35■□□□□ 0.69
SLC6A8-201ENST00000253122 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.35■□□□□ 0.692e-11■■■□□ 17.9
SLC6A8-201ENST00000253122 CWC22Q9HCG8 908 aaKnown RBP19.35■□□□□ 0.69
SLC6A8-201ENST00000253122 SYNMO15061 1565 aa19.35■□□□□ 0.69
SLC6A8-201ENST00000253122 MBD3O95983 291 aa19.35■□□□□ 0.69
SLC6A8-201ENST00000253122 GNAI1P63096 354 aa19.35■□□□□ 0.69
SLC6A8-201ENST00000253122 SMARCA5O60264 1052 aaPredicted RBP19.35■□□□□ 0.69
SLC6A8-201ENST00000253122 RBSNQ9H1K0 784 aa19.34■□□□□ 0.69
SLC6A8-201ENST00000253122 GDPD2Q9HCC8 539 aa19.33■□□□□ 0.69
SLC6A8-201ENST00000253122 KCNJ4P48050 445 aa19.33■□□□□ 0.68
SLC6A8-201ENST00000253122 CCDC27Q2M243 656 aa19.33■□□□□ 0.68
SLC6A8-201ENST00000253122 CLTCQ00610 1675 aaKnown RBP19.32■□□□□ 0.68
SLC6A8-201ENST00000253122 TNRQ92752 1358 aa19.32■□□□□ 0.68
SLC6A8-201ENST00000253122 ZGPATQ8N5A5 531 aaKnown RBP19.32■□□□□ 0.68
SLC6A8-201ENST00000253122 PREX1Q8TCU6 1659 aa19.32■□□□□ 0.68
SLC6A8-201ENST00000253122 KIAA1210Q9ULL0 1709 aa19.32■□□□□ 0.68
SLC6A8-201ENST00000253122 FBLN1P23142 703 aa19.32■□□□□ 0.68
SLC6A8-201ENST00000253122 HAP1P54257 671 aaPredicted RBP19.31■□□□□ 0.68
SLC6A8-201ENST00000253122 C16orf71Q8IYS4 520 aaPredicted RBP19.31■□□□□ 0.68
SLC6A8-201ENST00000253122 CBX1P83916 185 aa19.31■□□□□ 0.68
SLC6A8-201ENST00000253122 ZNF830Q96NB3 372 aaPredicted RBP19.31■□□□□ 0.68
SLC6A8-201ENST00000253122 NPC1L1Q9UHC9 1359 aa19.3■□□□□ 0.68
SLC6A8-201ENST00000253122 OS9Q13438 667 aaPredicted RBP19.3■□□□□ 0.68
SLC6A8-201ENST00000253122 SASS6Q6UVJ0 657 aa19.3■□□□□ 0.68
SLC6A8-201ENST00000253122 CHAMP1Q96JM3 812 aa19.3■□□□□ 0.68
SLC6A8-201ENST00000253122 ZKSCAN5Q9Y2L8 839 aa19.3■□□□□ 0.68
SLC6A8-201ENST00000253122 IQGAP1P46940 1657 aa19.29■□□□□ 0.68
SLC6A8-201ENST00000253122 LMOD3Q0VAK6 560 aa19.29■□□□□ 0.68
SLC6A8-201ENST00000253122 SIGLEC1Q9BZZ2 1709 aa19.29■□□□□ 0.68
SLC6A8-201ENST00000253122 NRXN1Q9ULB1 1477 aa19.29■□□□□ 0.68
SLC6A8-201ENST00000253122 RIMS2Q9UQ26 1411 aa19.28■□□□□ 0.68
SLC6A8-201ENST00000253122 ERC2O15083 957 aa19.28■□□□□ 0.68
SLC6A8-201ENST00000253122 CDK11BP21127 795 aaKnown RBP19.28■□□□□ 0.68
SLC6A8-201ENST00000253122 SPC24Q8NBT2 197 aa19.28■□□□□ 0.68
SLC6A8-201ENST00000253122 PKP1Q13835 747 aa19.28■□□□□ 0.68
SLC6A8-201ENST00000253122 UPF3BQ9BZI7 483 aaKnown RBP19.27■□□□□ 0.68
SLC6A8-201ENST00000253122 CEBPAP49715 358 aaPredicted RBP19.27■□□□□ 0.68
SLC6A8-201ENST00000253122 ALDH1L2Q3SY69 923 aa19.27■□□□□ 0.68
SLC6A8-201ENST00000253122 NECTIN2Q92692 538 aa19.27■□□□□ 0.68
SLC6A8-201ENST00000253122 PPLO60437 1756 aa19.27■□□□□ 0.68
SLC6A8-201ENST00000253122 USP25Q9UHP3 1055 aa19.27■□□□□ 0.67
SLC6A8-201ENST00000253122 EID1Q9Y6B2 187 aa19.27■□□□□ 0.67
SLC6A8-201ENST00000253122 DCTN1Q14203 1278 aa19.26■□□□□ 0.67
SLC6A8-201ENST00000253122 FIBPO43427 364 aa19.26■□□□□ 0.67
SLC6A8-201ENST00000253122 PRAM1Q96QH2 718 aa19.26■□□□□ 0.67
SLC6A8-201ENST00000253122 RTF1Q92541 710 aaKnown RBP19.26■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 71.3 ms