RNA–Protein interactions for RNA: ENST00000249299.6

LSM8-201, Transcript of LSM8 homolog, U6 small nuclear RNA associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM8, Length 1,305 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM8-201ENST00000249299 POTEHQ6S545 545 aa17.26■□□□□ 0.35
LSM8-201ENST00000249299 EMILIN1Q9Y6C2 1016 aa17.26■□□□□ 0.35
LSM8-201ENST00000249299 COL3A1P02461 1466 aaPredicted RBP17.26■□□□□ 0.35
LSM8-201ENST00000249299 RRS1Q15050 365 aaKnown RBP17.25■□□□□ 0.35
LSM8-201ENST00000249299 NUTM2GQ5VZR2 741 aa17.25■□□□□ 0.35
LSM8-201ENST00000249299 ARHGEF25Q86VW2 580 aa17.25■□□□□ 0.35
LSM8-201ENST00000249299 FAM9BQ8IZU0 186 aa17.25■□□□□ 0.35
LSM8-201ENST00000249299 CPDO75976 1380 aa17.25■□□□□ 0.35
LSM8-201ENST00000249299 NGEFQ8N5V2 710 aa17.24■□□□□ 0.35
LSM8-201ENST00000249299 IP6K1Q92551 441 aa17.24■□□□□ 0.35
LSM8-201ENST00000249299 PNNQ9H307 717 aaKnown RBP17.24■□□□□ 0.35
LSM8-201ENST00000249299 ABCC6O95255 1503 aa17.24■□□□□ 0.35
LSM8-201ENST00000249299 MARF1Q9Y4F3 1742 aaKnown RBP17.24■□□□□ 0.35
LSM8-201ENST00000249299 AMPHP49418 695 aa17.23■□□□□ 0.35
LSM8-201ENST00000249299 PHRF1Q9P1Y6 1649 aaKnown RBP17.23■□□□□ 0.35
LSM8-201ENST00000249299 PPM1GO15355 546 aaPredicted RBP17.22■□□□□ 0.35
LSM8-201ENST00000249299 FBLN1P23142 703 aa17.22■□□□□ 0.35
LSM8-201ENST00000249299 IL13P35225 146 aa17.22■□□□□ 0.35
LSM8-201ENST00000249299 ADAMTS8Q9UP79 889 aa17.22■□□□□ 0.35
LSM8-201ENST00000249299 HOXC9P31274 260 aa17.21■□□□□ 0.35
LSM8-201ENST00000249299 BLMP54132 1417 aaPredicted RBP17.21■□□□□ 0.35
LSM8-201ENST00000249299 FCHSD2O94868 740 aa17.21■□□□□ 0.34
LSM8-201ENST00000249299 MAP2P11137 1827 aaKnown RBP17.2■□□□□ 0.34
LSM8-201ENST00000249299 PIP4K2BP78356 416 aa17.2■□□□□ 0.34
LSM8-201ENST00000249299 MKRN4PQ13434 485 aaPredicted RBP17.19■□□□□ 0.34
LSM8-201ENST00000249299 SOX12O15370 315 aa17.18■□□□□ 0.34
LSM8-201ENST00000249299 U2AF1L5P0DN76 240 aaPredicted RBP17.18■□□□□ 0.34
LSM8-201ENST00000249299 U2AF1Q01081 240 aaKnown RBP eCLIP17.18■□□□□ 0.34
LSM8-201ENST00000249299 EIF4A2Q14240 407 aaKnown RBP17.18■□□□□ 0.34
LSM8-201ENST00000249299 HSP90AB2PQ58FF8 381 aa17.18■□□□□ 0.34
LSM8-201ENST00000249299 COL16A1Q07092 1604 aaPredicted RBP17.17■□□□□ 0.34
LSM8-201ENST00000249299 COL22A1Q8NFW1 1626 aaPredicted RBP17.17■□□□□ 0.34
LSM8-201ENST00000249299 RUNDC1Q96C34 613 aa17.16■□□□□ 0.34
LSM8-201ENST00000249299 CRYBG1Q9Y4K1 1723 aa17.16■□□□□ 0.34
LSM8-201ENST00000249299 SHPRHQ149N8 1683 aa17.15■□□□□ 0.34
LSM8-201ENST00000249299 PEAK1Q9H792 1746 aa17.15■□□□□ 0.34
LSM8-201ENST00000249299 U2SURPO15042 1029 aaKnown RBP17.15■□□□□ 0.34
LSM8-201ENST00000249299 PHLPP1O60346 1717 aa17.14■□□□□ 0.33
LSM8-201ENST00000249299 ZBED9Q6R2W3 1325 aa17.14■□□□□ 0.33
LSM8-201ENST00000249299 HAP1P54257 671 aaPredicted RBP17.14■□□□□ 0.33
LSM8-201ENST00000249299 ZC3H6P61129 1189 aaKnown RBP17.14■□□□□ 0.33
LSM8-201ENST00000249299 HNRNPUQ00839 825 aaKnown RBP eCLIP17.14■□□□□ 0.33
LSM8-201ENST00000249299 CABLES1Q8TDN4 633 aa17.14■□□□□ 0.33
LSM8-201ENST00000249299 KDRP35968 1356 aa17.13■□□□□ 0.33
LSM8-201ENST00000249299 KIAA0232Q92628 1395 aa17.13■□□□□ 0.33
LSM8-201ENST00000249299 JCADQ9P266 1359 aa17.13■□□□□ 0.33
LSM8-201ENST00000249299 IGSF1Q8N6C5 1336 aa17.13■□□□□ 0.33
LSM8-201ENST00000249299 NEFMP07197 916 aa17.13■□□□□ 0.33
LSM8-201ENST00000249299 PLEKHG2Q9H7P9 1386 aa17.12■□□□□ 0.33
LSM8-201ENST00000249299 PLEKHF1Q96S99 279 aa17.12■□□□□ 0.33
LSM8-201ENST00000249299 PRDM11Q9NQV5 511 aa17.12■□□□□ 0.33
LSM8-201ENST00000249299 RSPH6AQ9H0K4 717 aa17.11■□□□□ 0.33
LSM8-201ENST00000249299 ERBB3P21860 1342 aa17.1■□□□□ 0.33
LSM8-201ENST00000249299 SPATA31A6Q5VVP1 1343 aa17.1■□□□□ 0.33
LSM8-201ENST00000249299 YTHDC1Q96MU7 727 aaKnown RBP17.1■□□□□ 0.33
LSM8-201ENST00000249299 EYA1Q99502 592 aa17.1■□□□□ 0.33
LSM8-201ENST00000249299 NCAPD2Q15021 1401 aa17.1■□□□□ 0.33
LSM8-201ENST00000249299 LTN1O94822 1766 aa17.09■□□□□ 0.33
LSM8-201ENST00000249299 CCDC27Q2M243 656 aa17.09■□□□□ 0.33
LSM8-201ENST00000249299 ANKRD24Q8TF21 1146 aa17.09■□□□□ 0.33
LSM8-201ENST00000249299 AXIN2Q9Y2T1 843 aa17.09■□□□□ 0.33
LSM8-201ENST00000249299 MAPK8IP3Q9UPT6 1336 aa17.08■□□□□ 0.33
LSM8-201ENST00000249299 CENPBP07199 599 aaPredicted RBP17.08■□□□□ 0.32
LSM8-201ENST00000249299 PDE3BQ13370 1112 aa17.08■□□□□ 0.32
LSM8-201ENST00000249299 RGPD1P0DJD0 1748 aa17.08■□□□□ 0.32
LSM8-201ENST00000249299 SULT6B1Q6IMI4 303 aa17.07■□□□□ 0.32
LSM8-201ENST00000249299 ABCA3Q99758 1704 aa17.07■□□□□ 0.32
LSM8-201ENST00000249299 COL18A1P39060 1754 aa17.07■□□□□ 0.32
LSM8-201ENST00000249299 PRKAR2BP31323 418 aa17.06■□□□□ 0.32
LSM8-201ENST00000249299 TCP11L2Q8N4U5 519 aa17.06■□□□□ 0.32
LSM8-201ENST00000249299 FAM83GA6ND36 823 aa17.05■□□□□ 0.32
LSM8-201ENST00000249299 APAF1O14727 1248 aa17.05■□□□□ 0.32
LSM8-201ENST00000249299 LMO7Q8WWI1 1683 aa17.04■□□□□ 0.32
LSM8-201ENST00000249299 ZBTB7CA1YPR0 619 aa17.04■□□□□ 0.32
LSM8-201ENST00000249299 NBPF6Q5VWK0 638 aa17.04■□□□□ 0.32
LSM8-201ENST00000249299 CCDC146Q8IYE0 955 aa17.04■□□□□ 0.32
LSM8-201ENST00000249299 NBPF4Q96M43 638 aa17.04■□□□□ 0.32
LSM8-201ENST00000249299 WDR17Q8IZU2 1322 aa17.04■□□□□ 0.32
LSM8-201ENST00000249299 PLEKHG5O94827 1062 aa17.03■□□□□ 0.32
LSM8-201ENST00000249299 HMOX1P09601 288 aa17.03■□□□□ 0.32
LSM8-201ENST00000249299 CHRNA2Q15822 529 aa17.03■□□□□ 0.32
LSM8-201ENST00000249299 HSPA1LP34931 641 aa17.02■□□□□ 0.32
LSM8-201ENST00000249299 TMPOP42166 694 aaKnown RBP17.02■□□□□ 0.32
LSM8-201ENST00000249299 LTV1Q96GA3 475 aaPredicted RBP17.02■□□□□ 0.32
LSM8-201ENST00000249299 ZNF521Q96K83 1311 aa17.02■□□□□ 0.32
LSM8-201ENST00000249299 COL5A2P05997 1499 aaPredicted RBP17.02■□□□□ 0.31
LSM8-201ENST00000249299 COL14A1Q05707 1796 aaKnown RBP17.02■□□□□ 0.31
LSM8-201ENST00000249299 FAM208AQ9UK61 1670 aaKnown RBP17.02■□□□□ 0.31
LSM8-201ENST00000249299 CAMTA1Q9Y6Y1 1673 aa17.02■□□□□ 0.31
LSM8-201ENST00000249299 LMOD3Q0VAK6 560 aa17.01■□□□□ 0.31
LSM8-201ENST00000249299 NFE2L2Q16236 605 aa17.01■□□□□ 0.31
LSM8-201ENST00000249299 GAS2L2Q8NHY3 880 aa17.01■□□□□ 0.31
LSM8-201ENST00000249299 CARD10Q9BWT7 1032 aa17.01■□□□□ 0.31
LSM8-201ENST00000249299 CSB-PGBD3P0DP91 1061 aa17■□□□□ 0.31
LSM8-201ENST00000249299 AMOTQ4VCS5 1084 aa17■□□□□ 0.31
LSM8-201ENST00000249299 AEBP1Q8IUX7 1158 aa17■□□□□ 0.31
LSM8-201ENST00000249299 WDR63Q8IWG1 891 aa17■□□□□ 0.31
LSM8-201ENST00000249299 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17■□□□□ 0.314e-7■□□□□ 9.1
LSM8-201ENST00000249299 ZBTB12Q9Y330 459 aaPredicted RBP17■□□□□ 0.31
LSM8-201ENST00000249299 HTATSF1O43719 755 aaKnown RBP16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms