RNA–Protein interactions for RNA: ENST00000245817.4

TNFSF9-201, Transcript of TNF superfamily member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFSF9, Length 1,665 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF9-201ENST00000245817 WWC1Q8IX03 1113 aa24.56■■□□□ 1.52
TNFSF9-201ENST00000245817 RSPH6AQ9H0K4 717 aa24.56■■□□□ 1.52
TNFSF9-201ENST00000245817 CCDC27Q2M243 656 aa24.56■■□□□ 1.52
TNFSF9-201ENST00000245817 E9PSI1 815 aa24.53■■□□□ 1.52
TNFSF9-201ENST00000245817 TMPOP42166 694 aaKnown RBP24.53■■□□□ 1.52
TNFSF9-201ENST00000245817 HOXC9P31274 260 aa24.53■■□□□ 1.52
TNFSF9-201ENST00000245817 FKBP8Q14318 412 aa24.53■■□□□ 1.52
TNFSF9-201ENST00000245817 DDX17Q92841 729 aaKnown RBP24.53■■□□□ 1.52
TNFSF9-201ENST00000245817 GCP02774 474 aa24.52■■□□□ 1.52
TNFSF9-201ENST00000245817 SLFN5Q08AF3 891 aa24.52■■□□□ 1.52
TNFSF9-201ENST00000245817 WDR63Q8IWG1 891 aa24.52■■□□□ 1.52
TNFSF9-201ENST00000245817 FBXO41Q8TF61 875 aa24.52■■□□□ 1.52
TNFSF9-201ENST00000245817 PLEKHG5O94827 1062 aa24.51■■□□□ 1.51
TNFSF9-201ENST00000245817 PEAK1Q9H792 1746 aa24.51■■□□□ 1.51
TNFSF9-201ENST00000245817 RTL1A6NKG5 1358 aa24.51■■□□□ 1.51
TNFSF9-201ENST00000245817 TRPM3Q9HCF6 1732 aaPredicted RBP24.5■■□□□ 1.51
TNFSF9-201ENST00000245817 MARF1Q9Y4F3 1742 aaKnown RBP24.5■■□□□ 1.51
TNFSF9-201ENST00000245817 ZBTB7CA1YPR0 619 aa24.5■■□□□ 1.51
TNFSF9-201ENST00000245817 RIPK4P57078 832 aa24.5■■□□□ 1.51
TNFSF9-201ENST00000245817 SULT6B1Q6IMI4 303 aa24.5■■□□□ 1.51
TNFSF9-201ENST00000245817 DUSP27Q5VZP5 1158 aa24.49■■□□□ 1.51
TNFSF9-201ENST00000245817 PHF23Q9BUL5 403 aaPredicted RBP24.49■■□□□ 1.51
TNFSF9-201ENST00000245817 RCAN3Q9UKA8 241 aa24.49■■□□□ 1.51
TNFSF9-201ENST00000245817 USP19O94966 1318 aa24.49■■□□□ 1.51
TNFSF9-201ENST00000245817 IP6K1Q92551 441 aa24.48■■□□□ 1.51
TNFSF9-201ENST00000245817 ARHGEF10O15013 1369 aa24.46■■□□□ 1.51
TNFSF9-201ENST00000245817 NFE2L2Q16236 605 aa24.46■■□□□ 1.51
TNFSF9-201ENST00000245817 TNS3Q68CZ2 1445 aa24.46■■□□□ 1.51
TNFSF9-201ENST00000245817 NHSL1Q5SYE7 1610 aa24.45■■□□□ 1.5
TNFSF9-201ENST00000245817 SLIT3O75094 1523 aa24.45■■□□□ 1.5
TNFSF9-201ENST00000245817 NFAT5O94916 1531 aa24.45■■□□□ 1.5
TNFSF9-201ENST00000245817 SOS2Q07890 1332 aaPredicted RBP24.45■■□□□ 1.5
TNFSF9-201ENST00000245817 SPATA31A3Q5VYP0 1347 aa24.45■■□□□ 1.5
TNFSF9-201ENST00000245817 TRMT2AQ8IZ69 625 aaKnown RBP24.45■■□□□ 1.5
TNFSF9-201ENST00000245817 LTV1Q96GA3 475 aaPredicted RBP24.44■■□□□ 1.5
TNFSF9-201ENST00000245817 PHACTR3Q96KR7 559 aa24.44■■□□□ 1.5
TNFSF9-201ENST00000245817 ARHGEF25Q86VW2 580 aa24.43■■□□□ 1.5
TNFSF9-201ENST00000245817 AHDC1Q5TGY3 1603 aaPredicted RBP24.43■■□□□ 1.5
TNFSF9-201ENST00000245817 PXDNQ92626 1479 aa24.43■■□□□ 1.5
TNFSF9-201ENST00000245817 AEBP1Q8IUX7 1158 aa24.43■■□□□ 1.5
TNFSF9-201ENST00000245817 EYA1Q99502 592 aa24.43■■□□□ 1.5
TNFSF9-201ENST00000245817 SPINK5Q9NQ38 1064 aaPredicted RBP24.43■■□□□ 1.5
TNFSF9-201ENST00000245817 LMOD3Q0VAK6 560 aa24.42■■□□□ 1.5
TNFSF9-201ENST00000245817 LRRC59Q96AG4 307 aaKnown RBP24.42■■□□□ 1.5
TNFSF9-201ENST00000245817 MYH16Q9H6N6 1097 aa24.42■■□□□ 1.5
TNFSF9-201ENST00000245817 PHLPP1O60346 1717 aa24.42■■□□□ 1.5
TNFSF9-201ENST00000245817 ALS2Q96Q42 1657 aa24.42■■□□□ 1.5
TNFSF9-201ENST00000245817 TRIM35Q9UPQ4 493 aa24.41■■□□□ 1.5
TNFSF9-201ENST00000245817 IGSF1Q8N6C5 1336 aa24.41■■□□□ 1.5
TNFSF9-201ENST00000245817 HSPA1LP34931 641 aa24.4■■□□□ 1.5
TNFSF9-201ENST00000245817 CALD1Q05682 793 aaKnown RBP24.39■■□□□ 1.49
TNFSF9-201ENST00000245817 ZC3H6P61129 1189 aaKnown RBP24.38■■□□□ 1.49
TNFSF9-201ENST00000245817 IRX6P78412 446 aaPredicted RBP24.38■■□□□ 1.49
TNFSF9-201ENST00000245817 LTN1O94822 1766 aa24.38■■□□□ 1.49
TNFSF9-201ENST00000245817 IL16Q14005 1332 aa24.38■■□□□ 1.49
TNFSF9-201ENST00000245817 RNF123Q5XPI4 1314 aa24.38■■□□□ 1.49
TNFSF9-201ENST00000245817 RGPD1P0DJD0 1748 aa24.36■■□□□ 1.49
TNFSF9-201ENST00000245817 ERICH6BQ5W0A0 696 aa24.36■■□□□ 1.49
TNFSF9-201ENST00000245817 KDRP35968 1356 aa24.35■■□□□ 1.49
TNFSF9-201ENST00000245817 CABLES1Q8TDN4 633 aa24.34■■□□□ 1.49
TNFSF9-201ENST00000245817 HAP1P54257 671 aaPredicted RBP24.34■■□□□ 1.49
TNFSF9-201ENST00000245817 RRP1P56182 461 aaKnown RBP24.34■■□□□ 1.49
TNFSF9-201ENST00000245817 MED1Q15648 1581 aaPredicted RBP24.33■■□□□ 1.49
TNFSF9-201ENST00000245817 COL16A1Q07092 1604 aaPredicted RBP24.33■■□□□ 1.49
TNFSF9-201ENST00000245817 PHRF1Q9P1Y6 1649 aaKnown RBP24.33■■□□□ 1.48
TNFSF9-201ENST00000245817 ANKRD24Q8TF21 1146 aa24.32■■□□□ 1.48
TNFSF9-201ENST00000245817 GAS2L2Q8NHY3 880 aa24.31■■□□□ 1.48
TNFSF9-201ENST00000245817 NBPF6Q5VWK0 638 aa24.29■■□□□ 1.48
TNFSF9-201ENST00000245817 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.29■■□□□ 1.48
TNFSF9-201ENST00000245817 NBPF4Q96M43 638 aa24.29■■□□□ 1.48
TNFSF9-201ENST00000245817 USHBP1Q8N6Y0 703 aa24.28■■□□□ 1.48
TNFSF9-201ENST00000245817 LAS1LQ9Y4W2 734 aaKnown RBP24.28■■□□□ 1.48
TNFSF9-201ENST00000245817 RTF1Q92541 710 aaKnown RBP24.27■■□□□ 1.48
TNFSF9-201ENST00000245817 AXIN2Q9Y2T1 843 aa24.27■■□□□ 1.48
TNFSF9-201ENST00000245817 JCADQ9P266 1359 aa24.27■■□□□ 1.48
TNFSF9-201ENST00000245817 GNAI1P63096 354 aa24.27■■□□□ 1.48
TNFSF9-201ENST00000245817 MTHFSDQ2M296 383 aaKnown RBP24.27■■□□□ 1.48
TNFSF9-201ENST00000245817 FANCIQ9NVI1 1328 aa24.27■■□□□ 1.48
TNFSF9-201ENST00000245817 TSR2Q969E8 191 aaKnown RBP24.26■■□□□ 1.47
TNFSF9-201ENST00000245817 CPDO75976 1380 aa24.25■■□□□ 1.47
TNFSF9-201ENST00000245817 CT47B1P0C2W7 299 aaPredicted RBP24.25■■□□□ 1.47
TNFSF9-201ENST00000245817 IFT57Q9NWB7 429 aa24.25■■□□□ 1.47
TNFSF9-201ENST00000245817 THUMPD2Q9BTF0 503 aaKnown RBP24.24■■□□□ 1.47
TNFSF9-201ENST00000245817 KIAA0232Q92628 1395 aa24.24■■□□□ 1.47
TNFSF9-201ENST00000245817 FAM83GA6ND36 823 aa24.24■■□□□ 1.47
TNFSF9-201ENST00000245817 ERBB3P21860 1342 aa24.23■■□□□ 1.47
TNFSF9-201ENST00000245817 CSB-PGBD3P0DP91 1061 aa24.23■■□□□ 1.47
TNFSF9-201ENST00000245817 CHRNA2Q15822 529 aa24.23■■□□□ 1.47
TNFSF9-201ENST00000245817 ILDR1Q86SU0 546 aaPredicted RBP24.23■■□□□ 1.47
TNFSF9-201ENST00000245817 PRDM11Q9NQV5 511 aa24.23■■□□□ 1.47
TNFSF9-201ENST00000245817 HTATSF1O43719 755 aaKnown RBP24.21■■□□□ 1.47
TNFSF9-201ENST00000245817 DCTN1Q14203 1278 aa24.21■■□□□ 1.47
TNFSF9-201ENST00000245817 EXOSC9Q06265 439 aaKnown RBP24.21■■□□□ 1.47
TNFSF9-201ENST00000245817 CFAP44Q96MT7 982 aa24.21■■□□□ 1.47
TNFSF9-201ENST00000245817 ABCC6O95255 1503 aa24.2■■□□□ 1.46
TNFSF9-201ENST00000245817 PLIN1O60240 522 aa24.2■■□□□ 1.46
TNFSF9-201ENST00000245817 MCM10Q7L590 875 aa24.2■■□□□ 1.46
TNFSF9-201ENST00000245817 NLRP2Q9NX02 1062 aa24.2■■□□□ 1.46
TNFSF9-201ENST00000245817 PPP4R2Q9NY27 417 aa24.2■■□□□ 1.46
TNFSF9-201ENST00000245817 GNAT3A8MTJ3 354 aa24.19■■□□□ 1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms