RNA–Protein interactions for RNA: ENST00000237889.8

NDUFB3-201, Transcript of NADH:ubiquinone oxidoreductase subunit B3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDUFB3, Length 755 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFB3-201ENST00000237889 PTF1AQ7RTS3 328 aa14.34□□□□□ -0.11
NDUFB3-201ENST00000237889 BCL9O00512 1426 aa14.33□□□□□ -0.11
NDUFB3-201ENST00000237889 ATP7BP35670 1465 aa14.33□□□□□ -0.12
NDUFB3-201ENST00000237889 GCP02774 474 aa14.33□□□□□ -0.12
NDUFB3-201ENST00000237889 APLP1P51693 650 aa14.33□□□□□ -0.12
NDUFB3-201ENST00000237889 MARCH10Q8NA82 808 aaPredicted RBP14.33□□□□□ -0.12
NDUFB3-201ENST00000237889 NUDT16Q96DE0 195 aaKnown RBP14.33□□□□□ -0.12
NDUFB3-201ENST00000237889 ALS2Q96Q42 1657 aa14.33□□□□□ -0.12
NDUFB3-201ENST00000237889 SPATA31E1Q6ZUB1 1445 aa14.32□□□□□ -0.12
NDUFB3-201ENST00000237889 ZBTB7CA1YPR0 619 aa14.32□□□□□ -0.12
NDUFB3-201ENST00000237889 AATKQ6ZMQ8 1374 aa14.32□□□□□ -0.12
NDUFB3-201ENST00000237889 TRPM3Q9HCF6 1732 aaPredicted RBP14.32□□□□□ -0.12
NDUFB3-201ENST00000237889 IFT172Q9UG01 1749 aa14.32□□□□□ -0.12
NDUFB3-201ENST00000237889 RGPD3A6NKT7 1758 aaPredicted RBP14.31□□□□□ -0.12
NDUFB3-201ENST00000237889 RGPD8O14715 1765 aaPredicted RBP14.31□□□□□ -0.12
NDUFB3-201ENST00000237889 RGPD4Q7Z3J3 1758 aa14.31□□□□□ -0.12
NDUFB3-201ENST00000237889 ATP10DQ9P241 1426 aa14.31□□□□□ -0.12
NDUFB3-201ENST00000237889 CCDC61Q9Y6R9 512 aa14.3□□□□□ -0.12
NDUFB3-201ENST00000237889 TULP4Q9NRJ4 1543 aa14.3□□□□□ -0.12
NDUFB3-201ENST00000237889 CAPN15O75808 1086 aa14.29□□□□□ -0.12
NDUFB3-201ENST00000237889 COL5A2P05997 1499 aaPredicted RBP14.28□□□□□ -0.12
NDUFB3-201ENST00000237889 ACEP12821 1306 aa14.28□□□□□ -0.12
NDUFB3-201ENST00000237889 ZNF526Q8TF50 670 aaPredicted RBP14.28□□□□□ -0.12
NDUFB3-201ENST00000237889 USP19O94966 1318 aa14.27□□□□□ -0.12
NDUFB3-201ENST00000237889 SLC4A2P04920 1241 aa14.27□□□□□ -0.13
NDUFB3-201ENST00000237889 CSB-PGBD3P0DP91 1061 aa14.26□□□□□ -0.13
NDUFB3-201ENST00000237889 PRELPP51888 382 aa14.26□□□□□ -0.13
NDUFB3-201ENST00000237889 NLGN2Q8NFZ4 835 aa14.26□□□□□ -0.13
NDUFB3-201ENST00000237889 WDR17Q8IZU2 1322 aa14.25□□□□□ -0.13
NDUFB3-201ENST00000237889 PLEKHG3A1L390 1219 aa14.25□□□□□ -0.13
NDUFB3-201ENST00000237889 YBX3P16989 372 aaKnown RBP eCLIP14.25□□□□□ -0.132e-7■■□□□ 12.4
NDUFB3-201ENST00000237889 TNS4Q8IZW8 715 aa14.25□□□□□ -0.13
NDUFB3-201ENST00000237889 TFCP2L1Q9NZI6 479 aa14.25□□□□□ -0.13
NDUFB3-201ENST00000237889 PARP4Q9UKK3 1724 aaKnown RBP14.24□□□□□ -0.13
NDUFB3-201ENST00000237889 SLC27A3Q5K4L6 730 aa14.24□□□□□ -0.13
NDUFB3-201ENST00000237889 MPHOSPH9Q99550 1183 aa14.24□□□□□ -0.13
NDUFB3-201ENST00000237889 CARD10Q9BWT7 1032 aa14.24□□□□□ -0.13
NDUFB3-201ENST00000237889 CDK19Q9BWU1 502 aa14.24□□□□□ -0.13
NDUFB3-201ENST00000237889 POLR3AO14802 1390 aaPredicted RBP14.23□□□□□ -0.13
NDUFB3-201ENST00000237889 NLRP6P59044 892 aa14.23□□□□□ -0.13
NDUFB3-201ENST00000237889 GOLGB1Q14789 3259 aaKnown RBP14.22□□□□□ -0.13
NDUFB3-201ENST00000237889 SHANK3Q9BYB0 1731 aa14.22□□□□□ -0.13
NDUFB3-201ENST00000237889 ZNF827Q17R98 1081 aa14.22□□□□□ -0.13
NDUFB3-201ENST00000237889 DNAJC5GQ8N7S2 189 aa14.22□□□□□ -0.13
NDUFB3-201ENST00000237889 BRD4O60885 1362 aaPredicted RBP14.22□□□□□ -0.13
NDUFB3-201ENST00000237889 COL13A1Q5TAT6 717 aaPredicted RBP14.21□□□□□ -0.13
NDUFB3-201ENST00000237889 ACSBG1Q96GR2 724 aa14.21□□□□□ -0.13
NDUFB3-201ENST00000237889 U3KPZ7 1027 aaPredicted RBP14.21□□□□□ -0.13
NDUFB3-201ENST00000237889 PEAK1Q9H792 1746 aa14.21□□□□□ -0.14
NDUFB3-201ENST00000237889 CRYBG1Q9Y4K1 1723 aa14.21□□□□□ -0.14
NDUFB3-201ENST00000237889 HMGB2P26583 209 aaKnown RBP14.2□□□□□ -0.14
NDUFB3-201ENST00000237889 AKT1S1Q96B36 256 aa14.2□□□□□ -0.14
NDUFB3-201ENST00000237889 STAC3Q96MF2 364 aa14.2□□□□□ -0.14
NDUFB3-201ENST00000237889 TOMM70O94826 608 aa14.19□□□□□ -0.14
NDUFB3-201ENST00000237889 CD2APQ9Y5K6 639 aa14.19□□□□□ -0.14
NDUFB3-201ENST00000237889 PHRF1Q9P1Y6 1649 aaKnown RBP14.19□□□□□ -0.14
NDUFB3-201ENST00000237889 KCNH5Q8NCM2 988 aa14.18□□□□□ -0.14
NDUFB3-201ENST00000237889 LRRC4BQ9NT99 713 aa14.18□□□□□ -0.14
NDUFB3-201ENST00000237889 CCDC7Q96M83 1385 aa14.18□□□□□ -0.14
NDUFB3-201ENST00000237889 PNPLA7Q6ZV29 1317 aa14.17□□□□□ -0.14
NDUFB3-201ENST00000237889 LMO7Q8WWI1 1683 aa14.17□□□□□ -0.14
NDUFB3-201ENST00000237889 USP6P35125 1406 aa14.17□□□□□ -0.14
NDUFB3-201ENST00000237889 KIF3CO14782 793 aa14.17□□□□□ -0.14
NDUFB3-201ENST00000237889 AXIN2Q9Y2T1 843 aa14.16□□□□□ -0.14
NDUFB3-201ENST00000237889 ADCY9O60503 1353 aa14.15□□□□□ -0.14
NDUFB3-201ENST00000237889 PPARGC1BQ86YN6 1023 aaKnown RBP14.15□□□□□ -0.14
NDUFB3-201ENST00000237889 SRPK2P78362 688 aaKnown RBP14.14□□□□□ -0.15
NDUFB3-201ENST00000237889 KLRG1Q96E93 195 aa14.14□□□□□ -0.15
NDUFB3-201ENST00000237889 KDM2AQ9Y2K7 1162 aa14.14□□□□□ -0.15
NDUFB3-201ENST00000237889 LRRC37A3O60309 1634 aa14.14□□□□□ -0.15
NDUFB3-201ENST00000237889 SLC34A2O95436 690 aa14.13□□□□□ -0.15
NDUFB3-201ENST00000237889 ARHGEF25Q86VW2 580 aa14.13□□□□□ -0.15
NDUFB3-201ENST00000237889 C16orf71Q8IYS4 520 aaPredicted RBP14.13□□□□□ -0.15
NDUFB3-201ENST00000237889 JMYQ8N9B5 988 aa14.13□□□□□ -0.15
NDUFB3-201ENST00000237889 IL2RBP14784 551 aa14.12□□□□□ -0.15
NDUFB3-201ENST00000237889 SBF2Q86WG5 1849 aa14.12□□□□□ -0.15
NDUFB3-201ENST00000237889 TNS2Q63HR2 1409 aa14.11□□□□□ -0.15
NDUFB3-201ENST00000237889 FLAD1Q8NFF5 587 aa14.11□□□□□ -0.15
NDUFB3-201ENST00000237889 DCAF11Q8TEB1 546 aa14.11□□□□□ -0.15
NDUFB3-201ENST00000237889 PCDH10Q9P2E7 1040 aa14.11□□□□□ -0.15
NDUFB3-201ENST00000237889 ADGRB1O14514 1584 aa14.1□□□□□ -0.15
NDUFB3-201ENST00000237889 NLRP2Q9NX02 1062 aa14.1□□□□□ -0.15
NDUFB3-201ENST00000237889 WWC3Q9ULE0 1092 aa14.1□□□□□ -0.15
NDUFB3-201ENST00000237889 SYTL4Q96C24 671 aaPredicted RBP14.09□□□□□ -0.15
NDUFB3-201ENST00000237889 ITSN1Q15811 1721 aa14.09□□□□□ -0.15
NDUFB3-201ENST00000237889 PPIP5K1Q6PFW1 1433 aa14.08□□□□□ -0.15
NDUFB3-201ENST00000237889 SOX12O15370 315 aa14.08□□□□□ -0.16
NDUFB3-201ENST00000237889 RBM46Q8TBY0 533 aaKnown RBP14.08□□□□□ -0.16
NDUFB3-201ENST00000237889 FSTL1Q12841 308 aa14.07□□□□□ -0.16
NDUFB3-201ENST00000237889 COL23A1Q86Y22 540 aaPredicted RBP14.07□□□□□ -0.16
NDUFB3-201ENST00000237889 CABP1Q9NZU7 370 aa14.07□□□□□ -0.16
NDUFB3-201ENST00000237889 CCNL1Q9UK58 526 aaPredicted RBP14.07□□□□□ -0.16
NDUFB3-201ENST00000237889 CPSF1Q10570 1443 aaKnown RBP14.07□□□□□ -0.16
NDUFB3-201ENST00000237889 MSL1Q68DK7 614 aa14.06□□□□□ -0.16
NDUFB3-201ENST00000237889 ZNF692Q9BU19 519 aaPredicted RBP14.06□□□□□ -0.16
NDUFB3-201ENST00000237889 TOPAZ1Q8N9V7 1692 aa14.06□□□□□ -0.16
NDUFB3-201ENST00000237889 DDX54Q8TDD1 881 aaKnown RBP14.05□□□□□ -0.16
NDUFB3-201ENST00000237889 PAPPAQ13219 1627 aa14.04□□□□□ -0.16
NDUFB3-201ENST00000237889 KCNQ4P56696 695 aa14.04□□□□□ -0.16
NDUFB3-201ENST00000237889 CABP2Q9NPB3 220 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 78.2 ms